RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 BMT2Q1RMZ1 405 aa4.48□□□□□ -1.69
USP16-205ENST00000474835 DTHD1Q6ZMT9 781 aa4.48□□□□□ -1.69
USP16-205ENST00000474835 CCDC63Q8NA47 563 aa4.48□□□□□ -1.69
USP16-205ENST00000474835 TRPC4APQ8TEL6 797 aa4.48□□□□□ -1.69
USP16-205ENST00000474835 CCDC102AQ96A19 550 aa4.48□□□□□ -1.69
USP16-205ENST00000474835 MAML3Q96JK9 1138 aa4.48□□□□□ -1.69
USP16-205ENST00000474835 SENP6Q9GZR1 1112 aaPredicted RBP4.48□□□□□ -1.69
USP16-205ENST00000474835 MAF1Q9H063 256 aa4.48□□□□□ -1.69
USP16-205ENST00000474835 PCDH18Q9HCL0 1135 aa4.48□□□□□ -1.69
USP16-205ENST00000474835 LRWD1Q9UFC0 647 aa4.48□□□□□ -1.69
USP16-205ENST00000474835 NFU1Q9UMS0 254 aa4.48□□□□□ -1.69
USP16-205ENST00000474835 MAPK8IP1Q9UQF2 711 aa4.48□□□□□ -1.69
USP16-205ENST00000474835 ZBED4O75132 1171 aa4.48□□□□□ -1.69
USP16-205ENST00000474835 CAND2O75155 1236 aa4.48□□□□□ -1.69
USP16-205ENST00000474835 FLOT1O75955 427 aa4.48□□□□□ -1.69
USP16-205ENST00000474835 GFPT2O94808 682 aa4.48□□□□□ -1.69
USP16-205ENST00000474835 RPN1P04843 607 aaKnown RBP4.48□□□□□ -1.69
USP16-205ENST00000474835 NPM1P06748 294 aaKnown RBP eCLIP4.48□□□□□ -1.69
USP16-205ENST00000474835 TAC1P20366 129 aa4.48□□□□□ -1.69
USP16-205ENST00000474835 EIF4BP23588 611 aaKnown RBP4.48□□□□□ -1.69
USP16-205ENST00000474835 LONP1P36776 959 aaKnown RBP4.48□□□□□ -1.69
USP16-205ENST00000474835 MCAMP43121 646 aa4.48□□□□□ -1.69
USP16-205ENST00000474835 ACADVLP49748 655 aa4.48□□□□□ -1.69
USP16-205ENST00000474835 KIF11P52732 1056 aa4.48□□□□□ -1.69
USP16-205ENST00000474835 BPIFB4P59827 614 aa4.48□□□□□ -1.69
USP16-205ENST00000474835 AP1B1Q10567 949 aa4.48□□□□□ -1.69
USP16-205ENST00000474835 SLC18A3Q16572 532 aa4.48□□□□□ -1.69
USP16-205ENST00000474835 ZC2HC1CQ53FD0 456 aaPredicted RBP4.48□□□□□ -1.69
USP16-205ENST00000474835 C10orf76Q5T2E6 689 aa4.48□□□□□ -1.69
USP16-205ENST00000474835 LRRC34Q8IZ02 419 aa4.48□□□□□ -1.69
USP16-205ENST00000474835 STAG2Q8N3U4 1231 aa4.48□□□□□ -1.69
USP16-205ENST00000474835 SDR16C5Q8N3Y7 309 aa4.48□□□□□ -1.69
USP16-205ENST00000474835 RBBP8NLQ8NC74 664 aaPredicted RBP4.48□□□□□ -1.69
USP16-205ENST00000474835 SDF4Q9BRK5 362 aa4.48□□□□□ -1.69
USP16-205ENST00000474835 PYM1Q9BRP8 204 aaKnown RBP4.48□□□□□ -1.69
USP16-205ENST00000474835 ALG1Q9BT22 464 aa4.48□□□□□ -1.69
USP16-205ENST00000474835 ROPN1BQ9BZX4 212 aaPredicted RBP4.48□□□□□ -1.69
USP16-205ENST00000474835 ROPN1Q9HAT0 212 aaPredicted RBP4.48□□□□□ -1.69
USP16-205ENST00000474835 BLOC1S4Q9NUP1 217 aa4.48□□□□□ -1.69
USP16-205ENST00000474835 SMARCAL1Q9NZC9 954 aa4.48□□□□□ -1.69
USP16-205ENST00000474835 NDUFA13Q9P0J0 144 aa4.48□□□□□ -1.69
USP16-205ENST00000474835 DNMT3BQ9UBC3 853 aaKnown RBP4.48□□□□□ -1.69
USP16-205ENST00000474835 PATJQ8NI35 1801 aa4.48□□□□□ -1.69
USP16-205ENST00000474835 ASTN2O75129 1339 aaPredicted RBP4.47□□□□□ -1.69
USP16-205ENST00000474835 OTOFQ9HC10 1997 aa4.47□□□□□ -1.69
USP16-205ENST00000474835 KLF18A0A0U1RQI7 1052 aa4.47□□□□□ -1.69
USP16-205ENST00000474835 NUTM2BA6NNL0 878 aaPredicted RBP4.47□□□□□ -1.69
USP16-205ENST00000474835 NUTM2EB1AL46 878 aaPredicted RBP4.47□□□□□ -1.69
USP16-205ENST00000474835 F8W8V4 182 aa4.47□□□□□ -1.69
USP16-205ENST00000474835 H0YHG0 523 aa4.47□□□□□ -1.69
USP16-205ENST00000474835 CCDC188H7C350 402 aa4.47□□□□□ -1.69
USP16-205ENST00000474835 N4BP3O15049 544 aa4.47□□□□□ -1.69
USP16-205ENST00000474835 CALRP27797 417 aaKnown RBP4.47□□□□□ -1.69
USP16-205ENST00000474835 CPOXP36551 454 aa4.47□□□□□ -1.69
USP16-205ENST00000474835 CLK2P49760 499 aaKnown RBP4.47□□□□□ -1.69
USP16-205ENST00000474835 MKRN3Q13064 507 aaKnown RBP4.47□□□□□ -1.69
USP16-205ENST00000474835 KRT72Q14CN4 511 aa4.47□□□□□ -1.69
USP16-205ENST00000474835 PLEKHG4Q58EX7 1191 aa4.47□□□□□ -1.69
USP16-205ENST00000474835 ANKRD40Q6AI12 368 aa4.47□□□□□ -1.69
USP16-205ENST00000474835 TRIM59Q8IWR1 403 aa4.47□□□□□ -1.69
USP16-205ENST00000474835 HOMEZQ8IX15 550 aa4.47□□□□□ -1.69
USP16-205ENST00000474835 SUPT20HQ8NEM7 779 aa4.47□□□□□ -1.69
USP16-205ENST00000474835 OR6Y1Q8NGX8 325 aa4.47□□□□□ -1.69
USP16-205ENST00000474835 B4GALNT2Q8NHY0 566 aa4.47□□□□□ -1.69
USP16-205ENST00000474835 NCOA7Q8NI08 942 aa4.47□□□□□ -1.69
USP16-205ENST00000474835 UCMAQ8WVF2 138 aa4.47□□□□□ -1.69
USP16-205ENST00000474835 GAB3Q8WWW8 586 aa4.47□□□□□ -1.69
USP16-205ENST00000474835 PRCCQ92733 491 aaPredicted RBP4.47□□□□□ -1.69
USP16-205ENST00000474835 DNAJC19Q96DA6 116 aa4.47□□□□□ -1.69
USP16-205ENST00000474835 MS4A14Q96JA4 679 aa4.47□□□□□ -1.69
USP16-205ENST00000474835 FSD1Q9BTV5 496 aa4.47□□□□□ -1.69
USP16-205ENST00000474835 METTL14Q9HCE5 456 aaKnown RBP4.47□□□□□ -1.69
USP16-205ENST00000474835 DISC1Q9NRI5 854 aa4.47□□□□□ -1.69
USP16-205ENST00000474835 EXOC1Q9NV70 894 aa4.47□□□□□ -1.69
USP16-205ENST00000474835 NR2E1Q9Y466 385 aa4.47□□□□□ -1.69
USP16-205ENST00000474835 COMMD3-BMI1R4GMX3 469 aa4.47□□□□□ -1.69
USP16-205ENST00000474835 ZMYM2Q9UBW7 1377 aa4.47□□□□□ -1.69
USP16-205ENST00000474835 UMODL1Q5DID0 1318 aa4.47□□□□□ -1.69
USP16-205ENST00000474835 A0A0B4J269 797 aa4.47□□□□□ -1.69
USP16-205ENST00000474835 A0A0J9YVX5 310 aa4.47□□□□□ -1.69
USP16-205ENST00000474835 PMM2O15305 246 aa4.47□□□□□ -1.69
USP16-205ENST00000474835 KRT86O43790 486 aa4.47□□□□□ -1.69
USP16-205ENST00000474835 PEX1O43933 1283 aa4.47□□□□□ -1.69
USP16-205ENST00000474835 PPP1R12BO60237 982 aaPredicted RBP4.47□□□□□ -1.69
USP16-205ENST00000474835 BMP15O95972 392 aa4.47□□□□□ -1.69
USP16-205ENST00000474835 CETPP11597 493 aa4.47□□□□□ -1.69
USP16-205ENST00000474835 ATP2A2P16615 1042 aaKnown RBP4.47□□□□□ -1.69
USP16-205ENST00000474835 CCNE1P24864 410 aa4.47□□□□□ -1.69
USP16-205ENST00000474835 FOXN2P32314 431 aa4.47□□□□□ -1.69
USP16-205ENST00000474835 CTAG1AP78358 180 aa4.47□□□□□ -1.69
USP16-205ENST00000474835 MRPS25P82663 173 aaKnown RBP4.47□□□□□ -1.69
USP16-205ENST00000474835 PLCB2Q00722 1185 aa4.47□□□□□ -1.69
USP16-205ENST00000474835 IKZF1Q13422 519 aa4.47□□□□□ -1.69
USP16-205ENST00000474835 TUBB3Q13509 450 aa4.47□□□□□ -1.69
USP16-205ENST00000474835 HSP90B2PQ58FF3 399 aa4.47□□□□□ -1.69
USP16-205ENST00000474835 IQCEQ6IPM2 695 aa4.47□□□□□ -1.69
USP16-205ENST00000474835 PGM2L1Q6PCE3 622 aa4.47□□□□□ -1.69
USP16-205ENST00000474835 SLC4A10Q6U841 1118 aa4.47□□□□□ -1.69
USP16-205ENST00000474835 OLFM4Q6UX06 510 aa4.47□□□□□ -1.69
USP16-205ENST00000474835 MPRIPQ6WCQ1 1025 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms