RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 CCNE1P24864 410 aa7.34□□□□□ -1.23
ATG4A-207ENST00000474825 CDC25BP30305 580 aa7.34□□□□□ -1.23
ATG4A-207ENST00000474825 RTP1P59025 263 aa7.34□□□□□ -1.23
ATG4A-207ENST00000474825 ARHGAP1Q07960 439 aa7.34□□□□□ -1.23
ATG4A-207ENST00000474825 PAK1Q13153 545 aa7.34□□□□□ -1.23
ATG4A-207ENST00000474825 TTLL4Q14679 1199 aa7.34□□□□□ -1.23
ATG4A-207ENST00000474825 TARBP2Q15633 366 aaKnown RBP7.34□□□□□ -1.23
ATG4A-207ENST00000474825 ZCWPW2Q504Y3 356 aa7.34□□□□□ -1.23
ATG4A-207ENST00000474825 XKR3Q5GH77 459 aa7.34□□□□□ -1.23
ATG4A-207ENST00000474825 FAM26FQ5R3K3 315 aa7.34□□□□□ -1.23
ATG4A-207ENST00000474825 IQSEC1Q6DN90 963 aa7.34□□□□□ -1.23
ATG4A-207ENST00000474825 SEPT14Q6ZU15 432 aa7.34□□□□□ -1.23
ATG4A-207ENST00000474825 ANO5Q75V66 913 aa7.34□□□□□ -1.23
ATG4A-207ENST00000474825 CYFIP1Q7L576 1253 aa7.34□□□□□ -1.23
ATG4A-207ENST00000474825 OTUD6AQ7L8S5 288 aa7.34□□□□□ -1.23
ATG4A-207ENST00000474825 DYMQ7RTS9 669 aa7.34□□□□□ -1.23
ATG4A-207ENST00000474825 PLPPR4Q7Z2D5 763 aa7.34□□□□□ -1.23
ATG4A-207ENST00000474825 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.34□□□□□ -1.23
ATG4A-207ENST00000474825 IRF2BP1Q8IU81 584 aa7.34□□□□□ -1.23
ATG4A-207ENST00000474825 CCDC60Q8IWA6 550 aaPredicted RBP7.34□□□□□ -1.23
ATG4A-207ENST00000474825 SMYD4Q8IYR2 804 aaPredicted RBP7.34□□□□□ -1.23
ATG4A-207ENST00000474825 BANK1Q8NDB2 785 aa7.34□□□□□ -1.23
ATG4A-207ENST00000474825 NPLOC4Q8TAT6 608 aa7.34□□□□□ -1.23
ATG4A-207ENST00000474825 ZNF507Q8TCN5 953 aa7.34□□□□□ -1.23
ATG4A-207ENST00000474825 SOCS4Q8WXH5 440 aa7.34□□□□□ -1.23
ATG4A-207ENST00000474825 MRFAP1L1Q96HT8 127 aa7.34□□□□□ -1.23
ATG4A-207ENST00000474825 GPR20Q99678 358 aa7.34□□□□□ -1.23
ATG4A-207ENST00000474825 DUSP9Q99956 384 aaKnown RBP7.34□□□□□ -1.23
ATG4A-207ENST00000474825 REEP2Q9BRK0 252 aa7.34□□□□□ -1.23
ATG4A-207ENST00000474825 NTPCRQ9BSD7 190 aaKnown RBP7.34□□□□□ -1.23
ATG4A-207ENST00000474825 SEMA6BQ9H3T3 888 aa7.34□□□□□ -1.23
ATG4A-207ENST00000474825 ABHD16BQ9H3Z7 469 aa7.34□□□□□ -1.23
ATG4A-207ENST00000474825 ST6GALNAC4Q9H4F1 302 aa7.34□□□□□ -1.23
ATG4A-207ENST00000474825 FANCLQ9NW38 375 aa7.34□□□□□ -1.23
ATG4A-207ENST00000474825 SLC5A4Q9NY91 659 aa7.34□□□□□ -1.23
ATG4A-207ENST00000474825 PKD2L1Q9P0L9 805 aa7.34□□□□□ -1.23
ATG4A-207ENST00000474825 GABBR1Q9UBS5 961 aa7.34□□□□□ -1.23
ATG4A-207ENST00000474825 TCEAL9Q9UHQ7 104 aa7.34□□□□□ -1.23
ATG4A-207ENST00000474825 NRBP1Q9UHY1 535 aa7.34□□□□□ -1.23
ATG4A-207ENST00000474825 TSKSQ9UJT2 592 aa7.34□□□□□ -1.23
ATG4A-207ENST00000474825 NFE2L3Q9Y4A8 694 aa7.34□□□□□ -1.23
ATG4A-207ENST00000474825 COL4A3BPQ9Y5P4 624 aa7.34□□□□□ -1.23
ATG4A-207ENST00000474825 EMSYQ7Z589 1322 aa7.33□□□□□ -1.24
ATG4A-207ENST00000474825 NPHP3-ACAD11A0A0J9YXS1 232 aa7.33□□□□□ -1.24
ATG4A-207ENST00000474825 BICDL2A1A5D9 508 aa7.33□□□□□ -1.24
ATG4A-207ENST00000474825 ARHGEF35A5YM69 484 aa7.33□□□□□ -1.24
ATG4A-207ENST00000474825 NKRFO15226 690 aaKnown RBP eCLIP7.33□□□□□ -1.24
ATG4A-207ENST00000474825 EIF3DO15371 548 aaKnown RBP eCLIP7.33□□□□□ -1.24
ATG4A-207ENST00000474825 TRPA1O75762 1119 aa7.33□□□□□ -1.24
ATG4A-207ENST00000474825 ADCY5O95622 1261 aa7.33□□□□□ -1.24
ATG4A-207ENST00000474825 GGPS1O95749 300 aa7.33□□□□□ -1.24
ATG4A-207ENST00000474825 CTGFP29279 349 aa7.33□□□□□ -1.24
ATG4A-207ENST00000474825 SLC26A2P50443 739 aa7.33□□□□□ -1.24
ATG4A-207ENST00000474825 ZNF75DP51815 510 aa7.33□□□□□ -1.24
ATG4A-207ENST00000474825 PMS1P54277 932 aaKnown RBP7.33□□□□□ -1.24
ATG4A-207ENST00000474825 MCCD1P59942 119 aaPredicted RBP7.33□□□□□ -1.24
ATG4A-207ENST00000474825 TPM4P67936 248 aa7.33□□□□□ -1.24
ATG4A-207ENST00000474825 NKX3-2P78367 333 aa7.33□□□□□ -1.24
ATG4A-207ENST00000474825 LRRC63Q05C16 580 aa7.33□□□□□ -1.24
ATG4A-207ENST00000474825 STIM1Q13586 685 aa7.33□□□□□ -1.24
ATG4A-207ENST00000474825 ACVR2BQ13705 512 aa7.33□□□□□ -1.24
ATG4A-207ENST00000474825 LAMC2Q13753 1193 aa7.33□□□□□ -1.24
ATG4A-207ENST00000474825 DHX8Q14562 1220 aaKnown RBP7.33□□□□□ -1.24
ATG4A-207ENST00000474825 NFIL3Q16649 462 aa7.33□□□□□ -1.24
ATG4A-207ENST00000474825 LY6KQ17RY6 165 aa7.33□□□□□ -1.24
ATG4A-207ENST00000474825 HSDL1Q3SXM5 330 aa7.33□□□□□ -1.24
ATG4A-207ENST00000474825 HS1BP3Q53T59 392 aa7.33□□□□□ -1.24
ATG4A-207ENST00000474825 HERC4Q5GLZ8 1057 aaPredicted RBP7.33□□□□□ -1.24
ATG4A-207ENST00000474825 SWSAP1Q6NVH7 229 aa7.33□□□□□ -1.24
ATG4A-207ENST00000474825 PADI6Q6TGC4 694 aa7.33□□□□□ -1.24
ATG4A-207ENST00000474825 DPP9Q86TI2 863 aa7.33□□□□□ -1.24
ATG4A-207ENST00000474825 FBXO16Q8IX29 292 aaPredicted RBP7.33□□□□□ -1.24
ATG4A-207ENST00000474825 TRMT44Q8IYL2 757 aaKnown RBP7.33□□□□□ -1.24
ATG4A-207ENST00000474825 MYOCDQ8IZQ8 938 aa7.33□□□□□ -1.24
ATG4A-207ENST00000474825 NOC3LQ8WTT2 800 aaKnown RBP7.33□□□□□ -1.24
ATG4A-207ENST00000474825 SCFD1Q8WVM8 642 aa7.33□□□□□ -1.24
ATG4A-207ENST00000474825 NELFBQ8WX92 580 aa7.33□□□□□ -1.24
ATG4A-207ENST00000474825 ANP32BQ92688 251 aaKnown RBP7.33□□□□□ -1.24
ATG4A-207ENST00000474825 P2RX5Q93086 422 aa7.33□□□□□ -1.24
ATG4A-207ENST00000474825 ABHD8Q96I13 439 aa7.33□□□□□ -1.24
ATG4A-207ENST00000474825 KCTD10Q9H3F6 313 aa7.33□□□□□ -1.24
ATG4A-207ENST00000474825 THAP9Q9H5L6 903 aa7.33□□□□□ -1.24
ATG4A-207ENST00000474825 C17orf75Q9HAS0 396 aa7.33□□□□□ -1.24
ATG4A-207ENST00000474825 PARVGQ9HBI0 331 aa7.33□□□□□ -1.24
ATG4A-207ENST00000474825 PDGFCQ9NRA1 345 aa7.33□□□□□ -1.24
ATG4A-207ENST00000474825 LIMA1Q9UHB6 759 aaKnown RBP7.33□□□□□ -1.24
ATG4A-207ENST00000474825 TRAF3IP3Q9Y228 551 aa7.33□□□□□ -1.24
ATG4A-207ENST00000474825 SAMM50Q9Y512 469 aa7.33□□□□□ -1.24
ATG4A-207ENST00000474825 PCNTO95613 3336 aa7.32□□□□□ -1.24
ATG4A-207ENST00000474825 UBE4BO95155 1302 aa7.32□□□□□ -1.24
ATG4A-207ENST00000474825 SYNRGQ9UMZ2 1314 aa7.32□□□□□ -1.24
ATG4A-207ENST00000474825 CCDC85CA6NKD9 419 aa7.32□□□□□ -1.24
ATG4A-207ENST00000474825 RSPH10B2B2RC85 870 aa7.32□□□□□ -1.24
ATG4A-207ENST00000474825 BACH1O14867 736 aa7.32□□□□□ -1.24
ATG4A-207ENST00000474825 KIF20AO95235 890 aa7.32□□□□□ -1.24
ATG4A-207ENST00000474825 GH1P01241 217 aa7.32□□□□□ -1.24
ATG4A-207ENST00000474825 OATP04181 439 aa7.32□□□□□ -1.24
ATG4A-207ENST00000474825 SSBP05455 408 aaKnown RBP eCLIP7.32□□□□□ -1.24
ATG4A-207ENST00000474825 RSPH10BP0C881 870 aa7.32□□□□□ -1.24
ATG4A-207ENST00000474825 ZNF865P0CJ78 1059 aaPredicted RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms