RNA–Protein interactions for RNA: ENST00000474597.5

SSR1-204, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-204ENST00000474597 NOLC1Q14978 699 aaKnown RBP eCLIP21.8■■□□□ 1.08
SSR1-204ENST00000474597 VWA3BQ502W6 1294 aa21.8■■□□□ 1.08
SSR1-204ENST00000474597 PLEKHH3Q7Z736 793 aa21.8■■□□□ 1.08
SSR1-204ENST00000474597 ZC3H3Q8IXZ2 948 aaKnown RBP21.8■■□□□ 1.08
SSR1-204ENST00000474597 CPLX3Q8WVH0 158 aa21.8■■□□□ 1.08
SSR1-204ENST00000474597 ZCCHC17Q9NP64 241 aaKnown RBP21.8■■□□□ 1.08
SSR1-204ENST00000474597 GSTTP1A0A1W2PQM5 241 aa21.8■■□□□ 1.08
SSR1-204ENST00000474597 NOP56O00567 594 aaKnown RBP21.8■■□□□ 1.08
SSR1-204ENST00000474597 DGAT1O75907 488 aa21.8■■□□□ 1.08
SSR1-204ENST00000474597 STBD1O95210 358 aa21.8■■□□□ 1.08
SSR1-204ENST00000474597 ARIH2O95376 493 aa21.8■■□□□ 1.08
SSR1-204ENST00000474597 TAF1CQ15572 869 aaPredicted RBP21.8■■□□□ 1.08
SSR1-204ENST00000474597 MIIPQ5JXC2 388 aa21.8■■□□□ 1.08
SSR1-204ENST00000474597 CELF3Q5SZQ8 465 aaKnown RBP21.8■■□□□ 1.08
SSR1-204ENST00000474597 DHX37Q8IY37 1157 aaKnown RBP21.8■■□□□ 1.08
SSR1-204ENST00000474597 C17orf53Q8N3J3 647 aaPredicted RBP21.8■■□□□ 1.08
SSR1-204ENST00000474597 SLC17A8Q8NDX2 589 aa21.8■■□□□ 1.08
SSR1-204ENST00000474597 CYP26B1Q9NR63 512 aa21.8■■□□□ 1.08
SSR1-204ENST00000474597 NR3C1P04150 777 aa21.79■■□□□ 1.08
SSR1-204ENST00000474597 OATP04181 439 aa21.79■■□□□ 1.08
SSR1-204ENST00000474597 TXNP10599 105 aaKnown RBP21.79■■□□□ 1.08
SSR1-204ENST00000474597 KCNA1Q09470 495 aa21.79■■□□□ 1.08
SSR1-204ENST00000474597 MTERF2Q49AM1 385 aa21.79■■□□□ 1.08
SSR1-204ENST00000474597 HS2ST1Q7LGA3 356 aa21.79■■□□□ 1.08
SSR1-204ENST00000474597 CNGA4Q8IV77 575 aa21.79■■□□□ 1.08
SSR1-204ENST00000474597 SYCP3Q8IZU3 236 aa21.79■■□□□ 1.08
SSR1-204ENST00000474597 TC2NQ8N9U0 490 aa21.79■■□□□ 1.08
SSR1-204ENST00000474597 MCPH1Q8NEM0 835 aa21.79■■□□□ 1.08
SSR1-204ENST00000474597 SCFD2Q8WU76 684 aa21.79■■□□□ 1.08
SSR1-204ENST00000474597 KIFAP3Q92845 792 aa21.79■■□□□ 1.08
SSR1-204ENST00000474597 PCMTD1Q96MG8 357 aaPredicted RBP21.79■■□□□ 1.08
SSR1-204ENST00000474597 NDST4Q9H3R1 872 aa21.79■■□□□ 1.08
SSR1-204ENST00000474597 AZI2Q9H6S1 392 aa21.79■■□□□ 1.08
SSR1-204ENST00000474597 ATP6V0A4Q9HBG4 840 aa21.79■■□□□ 1.08
SSR1-204ENST00000474597 GPBP1L1Q9HC44 474 aaPredicted RBP21.79■■□□□ 1.08
SSR1-204ENST00000474597 GPRC5CQ9NQ84 441 aa21.79■■□□□ 1.08
SSR1-204ENST00000474597 CPA4Q9UI42 421 aa21.79■■□□□ 1.08
SSR1-204ENST00000474597 IGKV6D-21A0A0A0MT36 114 aa21.78■■□□□ 1.08
SSR1-204ENST00000474597 IGF2BP3O00425 579 aaKnown RBP eCLIP21.78■■□□□ 1.081e-6■■■□□ 17.6
SSR1-204ENST00000474597 TCF7P36402 384 aaPredicted RBP21.78■■□□□ 1.08
SSR1-204ENST00000474597 STAT5BP51692 787 aa21.78■■□□□ 1.08
SSR1-204ENST00000474597 SMTNP53814 917 aa21.78■■□□□ 1.08
SSR1-204ENST00000474597 PEX3P56589 373 aa21.78■■□□□ 1.08
SSR1-204ENST00000474597 DMP1Q13316 513 aaPredicted RBP21.78■■□□□ 1.08
SSR1-204ENST00000474597 CEP135Q66GS9 1140 aa21.78■■□□□ 1.08
SSR1-204ENST00000474597 ZNF467Q7Z7K2 595 aaPredicted RBP21.78■■□□□ 1.08
SSR1-204ENST00000474597 PASKQ96RG2 1323 aa21.78■■□□□ 1.08
SSR1-204ENST00000474597 SLC10A3P09131 477 aa21.78■■□□□ 1.08
SSR1-204ENST00000474597 CASP14P31944 242 aa21.78■■□□□ 1.08
SSR1-204ENST00000474597 MARSP56192 900 aaKnown RBP21.78■■□□□ 1.08
SSR1-204ENST00000474597 INHBEP58166 350 aa21.78■■□□□ 1.08
SSR1-204ENST00000474597 GRB14Q14449 540 aa21.78■■□□□ 1.08
SSR1-204ENST00000474597 KSR1Q8IVT5 923 aa21.78■■□□□ 1.08
SSR1-204ENST00000474597 GOLGA5Q8TBA6 731 aa21.78■■□□□ 1.08
SSR1-204ENST00000474597 SPATA33Q96N06 139 aa21.78■■□□□ 1.08
SSR1-204ENST00000474597 BAG1Q99933 345 aaPredicted RBP21.78■■□□□ 1.08
SSR1-204ENST00000474597 GBP3Q9H0R5 595 aa21.78■■□□□ 1.08
SSR1-204ENST00000474597 TMEM206Q9H813 350 aa21.78■■□□□ 1.08
SSR1-204ENST00000474597 VTA1Q9NP79 307 aa21.78■■□□□ 1.08
SSR1-204ENST00000474597 NRBP2Q9NSY0 501 aa21.78■■□□□ 1.08
SSR1-204ENST00000474597 SLC5A4Q9NY91 659 aa21.78■■□□□ 1.08
SSR1-204ENST00000474597 CLIC2O15247 247 aa21.77■■□□□ 1.08
SSR1-204ENST00000474597 GYPCP04921 128 aa21.77■■□□□ 1.08
SSR1-204ENST00000474597 POLGP54098 1239 aaPredicted RBP21.77■■□□□ 1.08
SSR1-204ENST00000474597 PANX2Q96RD6 677 aa21.77■■□□□ 1.08
SSR1-204ENST00000474597 C17orf75Q9HAS0 396 aa21.77■■□□□ 1.08
SSR1-204ENST00000474597 ABT1Q9ULW3 272 aaKnown RBP21.77■■□□□ 1.08
SSR1-204ENST00000474597 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.77■■□□□ 1.08
SSR1-204ENST00000474597 ZMYM2Q9UBW7 1377 aa21.77■■□□□ 1.08
SSR1-204ENST00000474597 TGFB1I1O43294 461 aa21.76■■□□□ 1.07
SSR1-204ENST00000474597 MFAP3LO75121 409 aa21.76■■□□□ 1.07
SSR1-204ENST00000474597 PPP1R37O75864 691 aa21.76■■□□□ 1.07
SSR1-204ENST00000474597 EPB41P11171 864 aaKnown RBP21.76■■□□□ 1.07
SSR1-204ENST00000474597 SYCP1Q15431 976 aa21.76■■□□□ 1.07
SSR1-204ENST00000474597 CCDC62Q6P9F0 684 aa21.76■■□□□ 1.07
SSR1-204ENST00000474597 AFAP1L1Q8TED9 768 aa21.76■■□□□ 1.07
SSR1-204ENST00000474597 CCDC51Q96ER9 411 aa21.76■■□□□ 1.07
SSR1-204ENST00000474597 ACCSQ96QU6 501 aa21.76■■□□□ 1.07
SSR1-204ENST00000474597 NUP58Q9BVL2 599 aa21.76■■□□□ 1.07
SSR1-204ENST00000474597 TMX1Q9H3N1 280 aa21.76■■□□□ 1.07
SSR1-204ENST00000474597 PDGFCQ9NRA1 345 aa21.76■■□□□ 1.07
SSR1-204ENST00000474597 DIS3Q9Y2L1 958 aaKnown RBP21.76■■□□□ 1.07
SSR1-204ENST00000474597 TLL2Q9Y6L7 1015 aa21.76■■□□□ 1.07
SSR1-204ENST00000474597 SLC15A5A6NIM6 579 aa21.76■■□□□ 1.07
SSR1-204ENST00000474597 CCDC169A6NNP5 214 aa21.76■■□□□ 1.07
SSR1-204ENST00000474597 SLC16A3O15427 465 aaKnown RBP21.76■■□□□ 1.07
SSR1-204ENST00000474597 ATP4AP20648 1035 aa21.76■■□□□ 1.07
SSR1-204ENST00000474597 NFIL3Q16649 462 aa21.76■■□□□ 1.07
SSR1-204ENST00000474597 HAUS6Q7Z4H7 955 aa21.76■■□□□ 1.07
SSR1-204ENST00000474597 FRMD5Q7Z6J6 570 aa21.76■■□□□ 1.07
SSR1-204ENST00000474597 IFNL1Q8IU54 200 aa21.76■■□□□ 1.07
SSR1-204ENST00000474597 GLG1Q92896 1179 aa21.76■■□□□ 1.07
SSR1-204ENST00000474597 CCDC102AQ96A19 550 aa21.76■■□□□ 1.07
SSR1-204ENST00000474597 FAM167AQ96KS9 214 aa21.76■■□□□ 1.07
SSR1-204ENST00000474597 ERGIC2Q96RQ1 377 aa21.76■■□□□ 1.07
SSR1-204ENST00000474597 PCYT2Q99447 389 aa21.76■■□□□ 1.07
SSR1-204ENST00000474597 GPR20Q99678 358 aa21.76■■□□□ 1.07
SSR1-204ENST00000474597 STRA6Q9BX79 667 aa21.76■■□□□ 1.07
SSR1-204ENST00000474597 ST6GALNAC4Q9H4F1 302 aa21.76■■□□□ 1.07
SSR1-204ENST00000474597 SPTLC3Q9NUV7 552 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms