RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 TMEM40Q8WWA1 233 aa22.96■■□□□ 1.27
PDLIM4-206ENST00000474421 OSMRQ99650 979 aa22.96■■□□□ 1.27
PDLIM4-206ENST00000474421 ADAM2Q99965 735 aa22.96■■□□□ 1.27
PDLIM4-206ENST00000474421 UNC45AQ9H3U1 944 aa22.96■■□□□ 1.27
PDLIM4-206ENST00000474421 RGS18Q9NS28 235 aa22.96■■□□□ 1.27
PDLIM4-206ENST00000474421 AKT3Q9Y243 479 aa22.96■■□□□ 1.27
PDLIM4-206ENST00000474421 MRPL42Q9Y6G3 142 aaKnown RBP22.96■■□□□ 1.27
PDLIM4-206ENST00000474421 STK36Q9NRP7 1315 aa22.96■■□□□ 1.27
PDLIM4-206ENST00000474421 GRM6O15303 877 aa22.95■■□□□ 1.26
PDLIM4-206ENST00000474421 ZNF862O60290 1169 aa22.95■■□□□ 1.26
PDLIM4-206ENST00000474421 GPR32O75388 356 aa22.95■■□□□ 1.26
PDLIM4-206ENST00000474421 PSMD10O75832 226 aa22.95■■□□□ 1.26
PDLIM4-206ENST00000474421 VTNP04004 478 aa22.95■■□□□ 1.26
PDLIM4-206ENST00000474421 SCRN1Q12765 414 aa22.95■■□□□ 1.26
PDLIM4-206ENST00000474421 MIER3Q7Z3K6 550 aa22.95■■□□□ 1.26
PDLIM4-206ENST00000474421 PABPC5Q96DU9 382 aaKnown RBP22.95■■□□□ 1.26
PDLIM4-206ENST00000474421 MBOAT7Q96N66 472 aa22.95■■□□□ 1.26
PDLIM4-206ENST00000474421 PFKFB2O60825 505 aa22.94■■□□□ 1.26
PDLIM4-206ENST00000474421 TDP2O95551 362 aa22.94■■□□□ 1.26
PDLIM4-206ENST00000474421 MMP1P03956 469 aa22.94■■□□□ 1.26
PDLIM4-206ENST00000474421 CLCN3P51790 818 aa22.94■■□□□ 1.26
PDLIM4-206ENST00000474421 COL19A1Q14993 1142 aa22.94■■□□□ 1.26
PDLIM4-206ENST00000474421 NPY5RQ15761 445 aa22.94■■□□□ 1.26
PDLIM4-206ENST00000474421 NEK9Q8TD19 979 aa22.94■■□□□ 1.26
PDLIM4-206ENST00000474421 AIFM3Q96NN9 605 aa22.94■■□□□ 1.26
PDLIM4-206ENST00000474421 PLAGL2Q9UPG8 496 aa22.94■■□□□ 1.26
PDLIM4-206ENST00000474421 CCDC194A0A1B0GVG4 234 aa22.93■■□□□ 1.26
PDLIM4-206ENST00000474421 MGEA5O60502 916 aa22.93■■□□□ 1.26
PDLIM4-206ENST00000474421 NLRP11P59045 1033 aaKnown RBP22.93■■□□□ 1.26
PDLIM4-206ENST00000474421 TBC1D8BQ0IIM8 1120 aa22.93■■□□□ 1.26
PDLIM4-206ENST00000474421 PAN2Q504Q3 1202 aaKnown RBP22.93■■□□□ 1.26
PDLIM4-206ENST00000474421 FAM228AQ86W67 206 aa22.93■■□□□ 1.26
PDLIM4-206ENST00000474421 LINC01465Q8N7H1 131 aa22.93■■□□□ 1.26
PDLIM4-206ENST00000474421 ETNPPLQ8TBG4 499 aa22.93■■□□□ 1.26
PDLIM4-206ENST00000474421 PPP2R3CQ969Q6 453 aa22.93■■□□□ 1.26
PDLIM4-206ENST00000474421 PPP1R16BQ96T49 567 aa22.93■■□□□ 1.26
PDLIM4-206ENST00000474421 PHF20Q9BVI0 1012 aa22.93■■□□□ 1.26
PDLIM4-206ENST00000474421 DDX25Q9UHL0 483 aaKnown RBP22.93■■□□□ 1.26
PDLIM4-206ENST00000474421 FAM50BQ9Y247 325 aa22.93■■□□□ 1.26
PDLIM4-206ENST00000474421 KIAA1671Q9BY89 1806 aa22.93■■□□□ 1.26
PDLIM4-206ENST00000474421 ATG2AQ2TAZ0 1938 aa22.92■■□□□ 1.26
PDLIM4-206ENST00000474421 FNDC1Q4ZHG4 1894 aaPredicted RBP22.92■■□□□ 1.26
PDLIM4-206ENST00000474421 C9IYK1 514 aa22.92■■□□□ 1.26
PDLIM4-206ENST00000474421 CDC42EP1Q00587 391 aa22.92■■□□□ 1.26
PDLIM4-206ENST00000474421 UGCGQ16739 394 aa22.92■■□□□ 1.26
PDLIM4-206ENST00000474421 XKR3Q5GH77 459 aa22.92■■□□□ 1.26
PDLIM4-206ENST00000474421 PTCRAQ6ISU1 281 aaPredicted RBP22.92■■□□□ 1.26
PDLIM4-206ENST00000474421 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.92■■□□□ 1.26
PDLIM4-206ENST00000474421 WASF1Q92558 559 aa22.92■■□□□ 1.26
PDLIM4-206ENST00000474421 NAP1L4Q99733 375 aaKnown RBP22.92■■□□□ 1.26
PDLIM4-206ENST00000474421 C1QTNF1Q9BXJ1 281 aa22.92■■□□□ 1.26
PDLIM4-206ENST00000474421 NIFKQ9BYG3 293 aaKnown RBP22.92■■□□□ 1.26
PDLIM4-206ENST00000474421 ELAC1Q9H777 363 aaKnown RBP22.92■■□□□ 1.26
PDLIM4-206ENST00000474421 AAASQ9NRG9 546 aa22.92■■□□□ 1.26
PDLIM4-206ENST00000474421 TPCN1Q9ULQ1 816 aa22.92■■□□□ 1.26
PDLIM4-206ENST00000474421 KCNJ14Q9UNX9 436 aa22.92■■□□□ 1.26
PDLIM4-206ENST00000474421 GCFC2P16383 781 aaKnown RBP22.91■■□□□ 1.26
PDLIM4-206ENST00000474421 IBSPP21815 317 aaPredicted RBP22.91■■□□□ 1.26
PDLIM4-206ENST00000474421 EIF4BP23588 611 aaKnown RBP22.91■■□□□ 1.26
PDLIM4-206ENST00000474421 INF2Q27J81 1249 aa22.91■■□□□ 1.26
PDLIM4-206ENST00000474421 LETM2Q2VYF4 491 aa22.91■■□□□ 1.26
PDLIM4-206ENST00000474421 B3GNT9Q6UX72 402 aa22.91■■□□□ 1.26
PDLIM4-206ENST00000474421 EP400NLQ6ZTU2 488 aa22.91■■□□□ 1.26
PDLIM4-206ENST00000474421 LRRC71Q8N4P6 559 aa22.91■■□□□ 1.26
PDLIM4-206ENST00000474421 GJA10Q969M2 543 aa22.91■■□□□ 1.26
PDLIM4-206ENST00000474421 ADAMTS10Q9H324 1103 aa22.91■■□□□ 1.26
PDLIM4-206ENST00000474421 ATP6V0A4Q9HBG4 840 aa22.91■■□□□ 1.26
PDLIM4-206ENST00000474421 ALG13Q9NP73 1137 aaKnown RBP22.91■■□□□ 1.26
PDLIM4-206ENST00000474421 TMEM161AQ9NX61 479 aa22.91■■□□□ 1.26
PDLIM4-206ENST00000474421 CLDND1Q9NY35 253 aa22.91■■□□□ 1.26
PDLIM4-206ENST00000474421 ZSCAN20P17040 1043 aaPredicted RBP22.9■■□□□ 1.26
PDLIM4-206ENST00000474421 FAM189BP81408 668 aa22.9■■□□□ 1.26
PDLIM4-206ENST00000474421 TARBP2Q15633 366 aaKnown RBP22.9■■□□□ 1.26
PDLIM4-206ENST00000474421 PPP4R3AQ6IN85 833 aa22.9■■□□□ 1.26
PDLIM4-206ENST00000474421 NEK8Q86SG6 692 aa22.9■■□□□ 1.26
PDLIM4-206ENST00000474421 FAM20AQ96MK3 541 aa22.9■■□□□ 1.26
PDLIM4-206ENST00000474421 SCLT1Q96NL6 688 aa22.9■■□□□ 1.26
PDLIM4-206ENST00000474421 SEPT9Q9UHD8 586 aaPredicted RBP22.9■■□□□ 1.26
PDLIM4-206ENST00000474421 PCDHB12Q9Y5F1 795 aa22.9■■□□□ 1.26
PDLIM4-206ENST00000474421 GRXCR2A6NFK2 248 aa22.89■■□□□ 1.25
PDLIM4-206ENST00000474421 TBKBP1A7MCY6 615 aa22.89■■□□□ 1.25
PDLIM4-206ENST00000474421 H3BQ06 376 aaPredicted RBP22.89■■□□□ 1.25
PDLIM4-206ENST00000474421 HOXA2O43364 376 aa22.89■■□□□ 1.25
PDLIM4-206ENST00000474421 ITGB1P05556 798 aa22.89■■□□□ 1.25
PDLIM4-206ENST00000474421 GATMP50440 423 aa22.89■■□□□ 1.25
PDLIM4-206ENST00000474421 DNM2P50570 870 aa22.89■■□□□ 1.25
PDLIM4-206ENST00000474421 GPC3P51654 580 aa22.89■■□□□ 1.25
PDLIM4-206ENST00000474421 DSC3Q14574 896 aa22.89■■□□□ 1.25
PDLIM4-206ENST00000474421 CSPP1Q1MSJ5 1256 aa22.89■■□□□ 1.25
PDLIM4-206ENST00000474421 SPOUT1Q5T280 376 aaKnown RBP22.89■■□□□ 1.25
PDLIM4-206ENST00000474421 KLHL23Q8NBE8 558 aa22.89■■□□□ 1.25
PDLIM4-206ENST00000474421 SPPL3Q8TCT6 385 aa22.89■■□□□ 1.25
PDLIM4-206ENST00000474421 ORC3Q9UBD5 711 aaPredicted RBP22.89■■□□□ 1.25
PDLIM4-206ENST00000474421 DKC1O60832 514 aaKnown RBP eCLIP22.88■■□□□ 1.25
PDLIM4-206ENST00000474421 AK2P54819 239 aa22.88■■□□□ 1.25
PDLIM4-206ENST00000474421 PSMC5P62195 406 aa22.88■■□□□ 1.25
PDLIM4-206ENST00000474421 HYAL1Q12794 435 aa22.88■■□□□ 1.25
PDLIM4-206ENST00000474421 CTC1Q2NKJ3 1217 aa22.88■■□□□ 1.25
PDLIM4-206ENST00000474421 MTERF2Q49AM1 385 aa22.88■■□□□ 1.25
PDLIM4-206ENST00000474421 FAM178BQ8IXR5 827 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms