RNA–Protein interactions for RNA: ENST00000474309.1

EXOSC1-207, Transcript of exosome component 1, humanhuman

TSL 5

Gene EXOSC1, Length 260 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-207ENST00000474309 SWSAP1Q6NVH7 229 aa13.1□□□□□ -0.31
EXOSC1-207ENST00000474309 MIS18BP1Q6P0N0 1132 aa13.1□□□□□ -0.31
EXOSC1-207ENST00000474309 PDXDC2PQ6P474 469 aa13.1□□□□□ -0.31
EXOSC1-207ENST00000474309 APOA5Q6Q788 366 aa13.1□□□□□ -0.31
EXOSC1-207ENST00000474309 MICU3Q86XE3 530 aa13.1□□□□□ -0.31
EXOSC1-207ENST00000474309 PLA2G4DQ86XP0 818 aa13.1□□□□□ -0.31
EXOSC1-207ENST00000474309 CCDC60Q8IWA6 550 aaPredicted RBP13.1□□□□□ -0.31
EXOSC1-207ENST00000474309 ASIC4Q96FT7 647 aa13.1□□□□□ -0.31
EXOSC1-207ENST00000474309 RPGRIP1Q96KN7 1286 aa13.1□□□□□ -0.31
EXOSC1-207ENST00000474309 LRRC2Q9BYS8 371 aa13.1□□□□□ -0.31
EXOSC1-207ENST00000474309 TMEM117Q9H0C3 514 aa13.1□□□□□ -0.31
EXOSC1-207ENST00000474309 TBC1D22BQ9NU19 505 aa13.1□□□□□ -0.31
EXOSC1-207ENST00000474309 BARHL2Q9NY43 387 aa13.1□□□□□ -0.31
EXOSC1-207ENST00000474309 GINS2Q9Y248 185 aa13.1□□□□□ -0.31
EXOSC1-207ENST00000474309 PCDHGC5Q9Y5F6 944 aa13.1□□□□□ -0.31
EXOSC1-207ENST00000474309 MAFBQ9Y5Q3 323 aaPredicted RBP13.1□□□□□ -0.31
EXOSC1-207ENST00000474309 CNTNAP5Q8WYK1 1306 aa13.1□□□□□ -0.31
EXOSC1-207ENST00000474309 MAGEB2O15479 319 aa13.09□□□□□ -0.31
EXOSC1-207ENST00000474309 GPR32O75388 356 aa13.09□□□□□ -0.31
EXOSC1-207ENST00000474309 EXOSC10Q01780 885 aaKnown RBP13.09□□□□□ -0.31
EXOSC1-207ENST00000474309 KRT17Q04695 432 aa13.09□□□□□ -0.31
EXOSC1-207ENST00000474309 TCF15Q12870 199 aa13.09□□□□□ -0.31
EXOSC1-207ENST00000474309 ZNF746Q6NUN9 644 aaPredicted RBP13.09□□□□□ -0.31
EXOSC1-207ENST00000474309 ANKRD54Q6NXT1 300 aa13.09□□□□□ -0.31
EXOSC1-207ENST00000474309 FAM228AQ86W67 206 aa13.09□□□□□ -0.31
EXOSC1-207ENST00000474309 RAB11FIP4Q86YS3 637 aa13.09□□□□□ -0.31
EXOSC1-207ENST00000474309 VN1R2Q8NFZ6 395 aa13.09□□□□□ -0.31
EXOSC1-207ENST00000474309 CRYGNQ8WXF5 182 aa13.09□□□□□ -0.31
EXOSC1-207ENST00000474309 PGBD1Q96JS3 809 aa13.09□□□□□ -0.31
EXOSC1-207ENST00000474309 ESYT1Q9BSJ8 1104 aa13.09□□□□□ -0.31
EXOSC1-207ENST00000474309 IGLV3-22A0A075B6J6 115 aa13.08□□□□□ -0.32
EXOSC1-207ENST00000474309 FAM86B1E9PN63 330 aa13.08□□□□□ -0.32
EXOSC1-207ENST00000474309 IPO5O00410 1097 aaKnown RBP13.08□□□□□ -0.32
EXOSC1-207ENST00000474309 ST18O60284 1047 aa13.08□□□□□ -0.32
EXOSC1-207ENST00000474309 C22orf31O95567 290 aa13.08□□□□□ -0.32
EXOSC1-207ENST00000474309 FAM86B2P0C5J1 330 aa13.08□□□□□ -0.32
EXOSC1-207ENST00000474309 ZSCAN20P17040 1043 aaPredicted RBP13.08□□□□□ -0.32
EXOSC1-207ENST00000474309 AVPR2P30518 371 aa13.08□□□□□ -0.32
EXOSC1-207ENST00000474309 PPM1AP35813 382 aa13.08□□□□□ -0.32
EXOSC1-207ENST00000474309 RCAN1P53805 252 aa13.08□□□□□ -0.32
EXOSC1-207ENST00000474309 RTN1Q16799 776 aa13.08□□□□□ -0.32
EXOSC1-207ENST00000474309 KIZQ2M2Z5 673 aa13.08□□□□□ -0.32
EXOSC1-207ENST00000474309 TSGA10IPQ3SY00 556 aa13.08□□□□□ -0.32
EXOSC1-207ENST00000474309 RNF20Q5VTR2 975 aa13.08□□□□□ -0.32
EXOSC1-207ENST00000474309 SYCE2Q6PIF2 218 aa13.08□□□□□ -0.32
EXOSC1-207ENST00000474309 DHX32Q7L7V1 743 aaKnown RBP13.08□□□□□ -0.32
EXOSC1-207ENST00000474309 SMAP1Q8IYB5 467 aaPredicted RBP13.08□□□□□ -0.32
EXOSC1-207ENST00000474309 CASD1Q96PB1 797 aa13.08□□□□□ -0.32
EXOSC1-207ENST00000474309 PHOX2BQ99453 314 aa13.08□□□□□ -0.32
EXOSC1-207ENST00000474309 OSMRQ99650 979 aa13.08□□□□□ -0.32
EXOSC1-207ENST00000474309 CEP131Q9UPN4 1083 aa13.08□□□□□ -0.32
EXOSC1-207ENST00000474309 PCDHA10Q9Y5I2 948 aa13.08□□□□□ -0.32
EXOSC1-207ENST00000474309 WDR81Q562E7 1941 aa13.07□□□□□ -0.32
EXOSC1-207ENST00000474309 RIF1Q5UIP0 2472 aaKnown RBP13.07□□□□□ -0.32
EXOSC1-207ENST00000474309 DDX39AO00148 427 aaKnown RBP13.07□□□□□ -0.32
EXOSC1-207ENST00000474309 ZBTB43O43298 467 aa13.07□□□□□ -0.32
EXOSC1-207ENST00000474309 FGFR1P11362 822 aa13.07□□□□□ -0.32
EXOSC1-207ENST00000474309 IBSPP21815 317 aaPredicted RBP13.07□□□□□ -0.32
EXOSC1-207ENST00000474309 TMOD1P28289 359 aa13.07□□□□□ -0.32
EXOSC1-207ENST00000474309 TECP42680 631 aa13.07□□□□□ -0.32
EXOSC1-207ENST00000474309 RBM10P98175 930 aaKnown RBP13.07□□□□□ -0.32
EXOSC1-207ENST00000474309 PTPN21Q16825 1174 aa13.07□□□□□ -0.32
EXOSC1-207ENST00000474309 KCNT2Q6UVM3 1135 aa13.07□□□□□ -0.32
EXOSC1-207ENST00000474309 LRRC55Q6ZSA7 311 aa13.07□□□□□ -0.32
EXOSC1-207ENST00000474309 CKAP2LQ8IYA6 745 aa13.07□□□□□ -0.32
EXOSC1-207ENST00000474309 FAM217BQ9NTX9 383 aaPredicted RBP13.07□□□□□ -0.32
EXOSC1-207ENST00000474309 BRPF3Q9ULD4 1205 aa13.07□□□□□ -0.32
EXOSC1-207ENST00000474309 ESYT2A0FGR8 921 aa13.06□□□□□ -0.32
EXOSC1-207ENST00000474309 EOMESO95936 686 aa13.06□□□□□ -0.32
EXOSC1-207ENST00000474309 VTNP04004 478 aa13.06□□□□□ -0.32
EXOSC1-207ENST00000474309 PSAPP07602 524 aa13.06□□□□□ -0.32
EXOSC1-207ENST00000474309 EIF4BP23588 611 aaKnown RBP13.06□□□□□ -0.32
EXOSC1-207ENST00000474309 CIITAP33076 1130 aa13.06□□□□□ -0.32
EXOSC1-207ENST00000474309 SETQ01105 290 aaPredicted RBP13.06□□□□□ -0.32
EXOSC1-207ENST00000474309 ITIH3Q06033 890 aa13.06□□□□□ -0.32
EXOSC1-207ENST00000474309 PFKFB3Q16875 520 aaPredicted RBP13.06□□□□□ -0.32
EXOSC1-207ENST00000474309 TPRNQ4KMQ1 711 aa13.06□□□□□ -0.32
EXOSC1-207ENST00000474309 PLPP4Q5VZY2 271 aa13.06□□□□□ -0.32
EXOSC1-207ENST00000474309 EFCAB12Q6NXP0 572 aa13.06□□□□□ -0.32
EXOSC1-207ENST00000474309 TMC7Q7Z402 723 aa13.06□□□□□ -0.32
EXOSC1-207ENST00000474309 ECHDC2Q86YB7 292 aa13.06□□□□□ -0.32
EXOSC1-207ENST00000474309 METTL13Q8N6R0 699 aa13.06□□□□□ -0.32
EXOSC1-207ENST00000474309 LINC01465Q8N7H1 131 aa13.06□□□□□ -0.32
EXOSC1-207ENST00000474309 RSPH1Q8WYR4 309 aa13.06□□□□□ -0.32
EXOSC1-207ENST00000474309 CASP10Q92851 521 aa13.06□□□□□ -0.32
EXOSC1-207ENST00000474309 FAM167AQ96KS9 214 aa13.06□□□□□ -0.32
EXOSC1-207ENST00000474309 RIPOR3Q96MK2 946 aa13.06□□□□□ -0.32
EXOSC1-207ENST00000474309 ZNF558Q96NG5 402 aa13.06□□□□□ -0.32
EXOSC1-207ENST00000474309 NECTIN4Q96NY8 510 aa13.06□□□□□ -0.32
EXOSC1-207ENST00000474309 TCF25Q9BQ70 676 aa13.06□□□□□ -0.32
EXOSC1-207ENST00000474309 ZNF577Q9BSK1 485 aa13.06□□□□□ -0.32
EXOSC1-207ENST00000474309 ZMYND12Q9H0C1 365 aa13.06□□□□□ -0.32
EXOSC1-207ENST00000474309 ADAMTS10Q9H324 1103 aa13.06□□□□□ -0.32
EXOSC1-207ENST00000474309 ANO2Q9NQ90 1003 aa13.06□□□□□ -0.32
EXOSC1-207ENST00000474309 NRBP2Q9NSY0 501 aa13.06□□□□□ -0.32
EXOSC1-207ENST00000474309 RNF19AQ9NV58 838 aa13.06□□□□□ -0.32
EXOSC1-207ENST00000474309 SPG21Q9NZD8 308 aa13.06□□□□□ -0.32
EXOSC1-207ENST00000474309 HCSTQ9UBK5 93 aa13.06□□□□□ -0.32
EXOSC1-207ENST00000474309 NR2E1Q9Y466 385 aa13.06□□□□□ -0.32
EXOSC1-207ENST00000474309 FAM186AA6NE01 2351 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms