RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 KIZQ2M2Z5 673 aa21.22■□□□□ 0.99
PTCD3-210ENST00000473829 TMEM266Q2M3C6 531 aa21.22■□□□□ 0.99
PTCD3-210ENST00000473829 APBB2Q92870 758 aa21.22■□□□□ 0.99
PTCD3-210ENST00000473829 HSD17B14Q9BPX1 270 aa21.22■□□□□ 0.99
PTCD3-210ENST00000473829 SUGCTQ9HAC7 445 aa21.22■□□□□ 0.99
PTCD3-210ENST00000473829 EYSQ5T1H1 3165 aa21.22■□□□□ 0.99
PTCD3-210ENST00000473829 IGKV6-21A0A0C4DH24 114 aa21.21■□□□□ 0.99
PTCD3-210ENST00000473829 TECP42680 631 aa21.21■□□□□ 0.99
PTCD3-210ENST00000473829 TPH2Q8IWU9 490 aa21.21■□□□□ 0.99
PTCD3-210ENST00000473829 LINC01599Q8WXQ3 324 aa21.21■□□□□ 0.99
PTCD3-210ENST00000473829 SNX21Q969T3 373 aa21.21■□□□□ 0.99
PTCD3-210ENST00000473829 ZNF668Q96K58 619 aaPredicted RBP21.21■□□□□ 0.99
PTCD3-210ENST00000473829 OSMRQ99650 979 aa21.21■□□□□ 0.99
PTCD3-210ENST00000473829 ZNF576Q9H609 170 aa21.21■□□□□ 0.99
PTCD3-210ENST00000473829 ZSWIM4Q9H7M6 989 aa21.21■□□□□ 0.99
PTCD3-210ENST00000473829 CYP26B1Q9NR63 512 aa21.21■□□□□ 0.99
PTCD3-210ENST00000473829 FOXD4L1Q9NU39 408 aa21.21■□□□□ 0.99
PTCD3-210ENST00000473829 AKT3Q9Y243 479 aa21.21■□□□□ 0.99
PTCD3-210ENST00000473829 SQORQ9Y6N5 450 aa21.21■□□□□ 0.99
PTCD3-210ENST00000473829 DKC1O60832 514 aaKnown RBP eCLIP21.2■□□□□ 0.98
PTCD3-210ENST00000473829 GJB5O95377 273 aa21.2■□□□□ 0.98
PTCD3-210ENST00000473829 CA3P07451 260 aa21.2■□□□□ 0.98
PTCD3-210ENST00000473829 YWHABP31946 246 aaKnown RBP21.2■□□□□ 0.98
PTCD3-210ENST00000473829 PTGDRQ13258 359 aa21.2■□□□□ 0.98
PTCD3-210ENST00000473829 GRIN2CQ14957 1233 aa21.2■□□□□ 0.98
PTCD3-210ENST00000473829 FAM117BQ6P1L5 589 aa21.2■□□□□ 0.98
PTCD3-210ENST00000473829 MYOCDQ8IZQ8 938 aa21.2■□□□□ 0.98
PTCD3-210ENST00000473829 NEK9Q8TD19 979 aa21.2■□□□□ 0.98
PTCD3-210ENST00000473829 MAP7D2Q96T17 732 aa21.2■□□□□ 0.98
PTCD3-210ENST00000473829 ADAMTS10Q9H324 1103 aa21.2■□□□□ 0.98
PTCD3-210ENST00000473829 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.2■□□□□ 0.98
PTCD3-210ENST00000473829 PADI3Q9ULW8 664 aa21.2■□□□□ 0.98
PTCD3-210ENST00000473829 NOC2LQ9Y3T9 749 aaKnown RBP21.2■□□□□ 0.98
PTCD3-210ENST00000473829 LCHNA4D1U4 455 aa21.19■□□□□ 0.98
PTCD3-210ENST00000473829 MAFO75444 373 aaPredicted RBP21.19■□□□□ 0.98
PTCD3-210ENST00000473829 AMHP03971 560 aa21.19■□□□□ 0.98
PTCD3-210ENST00000473829 SPATA31C1P0DKV0 1188 aa21.19■□□□□ 0.98
PTCD3-210ENST00000473829 TMOD1P28289 359 aa21.19■□□□□ 0.98
PTCD3-210ENST00000473829 NLRP11P59045 1033 aaKnown RBP21.19■□□□□ 0.98
PTCD3-210ENST00000473829 PAK2Q13177 524 aa21.19■□□□□ 0.98
PTCD3-210ENST00000473829 USP38Q8NB14 1042 aa21.19■□□□□ 0.98
PTCD3-210ENST00000473829 INTS4Q96HW7 963 aaKnown RBP21.19■□□□□ 0.98
PTCD3-210ENST00000473829 CEP170P1Q96L14 293 aa21.19■□□□□ 0.98
PTCD3-210ENST00000473829 TMX1Q9H3N1 280 aa21.19■□□□□ 0.98
PTCD3-210ENST00000473829 ERVK-5Q9HDB9 667 aa21.19■□□□□ 0.98
PTCD3-210ENST00000473829 BMP2KQ9NSY1 1161 aaPredicted RBP21.19■□□□□ 0.98
PTCD3-210ENST00000473829 A0A087WWV3 80 aa21.18■□□□□ 0.98
PTCD3-210ENST00000473829 TLL1O43897 1013 aa21.18■□□□□ 0.98
PTCD3-210ENST00000473829 MED24O75448 989 aa21.18■□□□□ 0.98
PTCD3-210ENST00000473829 LYPLA2O95372 231 aa21.18■□□□□ 0.98
PTCD3-210ENST00000473829 GPC3P51654 580 aa21.18■□□□□ 0.98
PTCD3-210ENST00000473829 CRYBB1P53674 252 aaPredicted RBP21.18■□□□□ 0.98
PTCD3-210ENST00000473829 RILPL1Q5EBL4 403 aa21.18■□□□□ 0.98
PTCD3-210ENST00000473829 PPP2R2DQ66LE6 453 aa21.18■□□□□ 0.98
PTCD3-210ENST00000473829 SPRED2Q7Z698 418 aa21.18■□□□□ 0.98
PTCD3-210ENST00000473829 RTN4RL1Q86UN2 441 aaPredicted RBP21.18■□□□□ 0.98
PTCD3-210ENST00000473829 FAM228AQ86W67 206 aa21.18■□□□□ 0.98
PTCD3-210ENST00000473829 CDX2Q99626 313 aaPredicted RBP21.18■□□□□ 0.98
PTCD3-210ENST00000473829 DHX33Q9H6R0 707 aaKnown RBP21.18■□□□□ 0.98
PTCD3-210ENST00000473829 SLC28A3Q9HAS3 691 aa21.18■□□□□ 0.98
PTCD3-210ENST00000473829 COL4A6Q14031 1691 aa21.18■□□□□ 0.98
PTCD3-210ENST00000473829 VPS37CA5D8V6 355 aaPredicted RBP21.17■□□□□ 0.98
PTCD3-210ENST00000473829 FXR2P51116 673 aaKnown RBP eCLIP21.17■□□□□ 0.98
PTCD3-210ENST00000473829 IL17AQ16552 155 aa21.17■□□□□ 0.98
PTCD3-210ENST00000473829 XKR9Q5GH70 373 aa21.17■□□□□ 0.98
PTCD3-210ENST00000473829 FERMT3Q86UX7 667 aa21.17■□□□□ 0.98
PTCD3-210ENST00000473829 CATSPER3Q86XQ3 398 aa21.17■□□□□ 0.98
PTCD3-210ENST00000473829 MYLIPQ8WY64 445 aa21.17■□□□□ 0.98
PTCD3-210ENST00000473829 ZBED2Q9BTP6 218 aa21.17■□□□□ 0.98
PTCD3-210ENST00000473829 TTC3P53804 2025 aa21.17■□□□□ 0.98
PTCD3-210ENST00000473829 ENPP3O14638 875 aa21.16■□□□□ 0.98
PTCD3-210ENST00000473829 MGEA5O60502 916 aa21.16■□□□□ 0.98
PTCD3-210ENST00000473829 RPS6KA5O75582 802 aa21.16■□□□□ 0.98
PTCD3-210ENST00000473829 SYT1P21579 422 aa21.16■□□□□ 0.98
PTCD3-210ENST00000473829 TAP1Q03518 808 aa21.16■□□□□ 0.98
PTCD3-210ENST00000473829 NFX1Q12986 1120 aaKnown RBP21.16■□□□□ 0.98
PTCD3-210ENST00000473829 PIGOQ8TEQ8 1089 aa21.16■□□□□ 0.98
PTCD3-210ENST00000473829 TOP1MTQ969P6 601 aa21.16■□□□□ 0.98
PTCD3-210ENST00000473829 TUFT1Q9NNX1 390 aa21.16■□□□□ 0.98
PTCD3-210ENST00000473829 SUCLA2Q9P2R7 463 aaPredicted RBP21.16■□□□□ 0.98
PTCD3-210ENST00000473829 ST3GAL5Q9UNP4 418 aa21.16■□□□□ 0.98
PTCD3-210ENST00000473829 UPP2O95045 317 aa21.15■□□□□ 0.98
PTCD3-210ENST00000473829 RFC5P40937 340 aa21.15■□□□□ 0.98
PTCD3-210ENST00000473829 POLGP54098 1239 aaPredicted RBP21.15■□□□□ 0.98
PTCD3-210ENST00000473829 HTRA4P83105 476 aaPredicted RBP21.15■□□□□ 0.98
PTCD3-210ENST00000473829 ATP2C1P98194 919 aaPredicted RBP21.15■□□□□ 0.98
PTCD3-210ENST00000473829 EMC2Q15006 297 aa21.15■□□□□ 0.98
PTCD3-210ENST00000473829 POTEGQ6S5H5 508 aa21.15■□□□□ 0.98
PTCD3-210ENST00000473829 OTUD6AQ7L8S5 288 aa21.15■□□□□ 0.98
PTCD3-210ENST00000473829 KSR1Q8IVT5 923 aa21.15■□□□□ 0.98
PTCD3-210ENST00000473829 SLC7A3Q8WY07 619 aa21.15■□□□□ 0.98
PTCD3-210ENST00000473829 RAD9AQ99638 391 aa21.15■□□□□ 0.98
PTCD3-210ENST00000473829 POLR3CQ9BUI4 534 aaPredicted RBP21.15■□□□□ 0.98
PTCD3-210ENST00000473829 PRDM12Q9H4Q4 367 aa21.15■□□□□ 0.98
PTCD3-210ENST00000473829 XPNPEP1Q9NQW7 623 aa21.15■□□□□ 0.98
PTCD3-210ENST00000473829 PPME1Q9Y570 386 aa21.15■□□□□ 0.98
PTCD3-210ENST00000473829 COL4A4P53420 1690 aaPredicted RBP21.15■□□□□ 0.98
PTCD3-210ENST00000473829 PP2D1A8MPX8 630 aa21.14■□□□□ 0.97
PTCD3-210ENST00000473829 PDCP20941 246 aa21.14■□□□□ 0.97
PTCD3-210ENST00000473829 PRPHP41219 470 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms