RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 PDHXO00330 501 aa6.85□□□□□ -1.31
CLK1-210ENST00000473565 SOCS7O14512 581 aa6.85□□□□□ -1.31
CLK1-210ENST00000473565 CALUO43852 315 aaPredicted RBP6.85□□□□□ -1.31
CLK1-210ENST00000473565 KIF20AO95235 890 aa6.85□□□□□ -1.31
CLK1-210ENST00000473565 LYPLA2O95372 231 aa6.85□□□□□ -1.31
CLK1-210ENST00000473565 ATP4AP20648 1035 aa6.85□□□□□ -1.31
CLK1-210ENST00000473565 MUTP22033 750 aa6.85□□□□□ -1.31
CLK1-210ENST00000473565 OSBPP22059 807 aa6.85□□□□□ -1.31
CLK1-210ENST00000473565 ERVK-9P63128 1117 aa6.85□□□□□ -1.31
CLK1-210ENST00000473565 KCNH2Q12809 1159 aa6.85□□□□□ -1.31
CLK1-210ENST00000473565 ENOX2Q16206 610 aaKnown RBP6.85□□□□□ -1.31
CLK1-210ENST00000473565 EDRF1Q3B7T1 1238 aa6.85□□□□□ -1.31
CLK1-210ENST00000473565 GJC2Q5T442 439 aaPredicted RBP6.85□□□□□ -1.31
CLK1-210ENST00000473565 ABHD15Q6UXT9 468 aa6.85□□□□□ -1.31
CLK1-210ENST00000473565 TRIM50Q86XT4 487 aa6.85□□□□□ -1.31
CLK1-210ENST00000473565 DNERQ8NFT8 737 aa6.85□□□□□ -1.31
CLK1-210ENST00000473565 OR8K1Q8NGG5 319 aa6.85□□□□□ -1.31
CLK1-210ENST00000473565 MS4A4AQ96JQ5 239 aa6.85□□□□□ -1.31
CLK1-210ENST00000473565 LSM14BQ9BX40 385 aaKnown RBP6.85□□□□□ -1.31
CLK1-210ENST00000473565 GBA2Q9HCG7 927 aaPredicted RBP6.85□□□□□ -1.31
CLK1-210ENST00000473565 TRIM10Q9UDY6 481 aa6.85□□□□□ -1.31
CLK1-210ENST00000473565 ARMCX3Q9UH62 379 aaPredicted RBP6.85□□□□□ -1.31
CLK1-210ENST00000473565 DNAI1Q9UI46 699 aa6.85□□□□□ -1.31
CLK1-210ENST00000473565 ODF2LQ9ULJ1 636 aa6.85□□□□□ -1.31
CLK1-210ENST00000473565 ADGRG1Q9Y653 693 aa6.85□□□□□ -1.31
CLK1-210ENST00000473565 ARID2Q68CP9 1835 aa6.84□□□□□ -1.31
CLK1-210ENST00000473565 SYNGAP1Q96PV0 1343 aa6.84□□□□□ -1.31
CLK1-210ENST00000473565 ZC3H4Q9UPT8 1303 aaKnown RBP6.84□□□□□ -1.31
CLK1-210ENST00000473565 FAM170AA1A519 330 aa6.84□□□□□ -1.31
CLK1-210ENST00000473565 GGPS1O95749 300 aa6.84□□□□□ -1.31
CLK1-210ENST00000473565 PSAPP07602 524 aa6.84□□□□□ -1.31
CLK1-210ENST00000473565 TRIM49P0CI25 452 aa6.84□□□□□ -1.31
CLK1-210ENST00000473565 TRIM49CP0CI26 452 aa6.84□□□□□ -1.31
CLK1-210ENST00000473565 KCNJ6P48051 423 aa6.84□□□□□ -1.31
CLK1-210ENST00000473565 TRIM14Q14142 442 aa6.84□□□□□ -1.31
CLK1-210ENST00000473565 KCTD2Q14681 263 aa6.84□□□□□ -1.31
CLK1-210ENST00000473565 TRIM65Q6PJ69 517 aa6.84□□□□□ -1.31
CLK1-210ENST00000473565 RRAGAQ7L523 313 aa6.84□□□□□ -1.31
CLK1-210ENST00000473565 ZC3H3Q8IXZ2 948 aaKnown RBP6.84□□□□□ -1.31
CLK1-210ENST00000473565 WDR24Q96S15 920 aa6.84□□□□□ -1.31
CLK1-210ENST00000473565 IWS1Q96ST2 819 aa6.84□□□□□ -1.31
CLK1-210ENST00000473565 DNAJC7Q99615 494 aa6.84□□□□□ -1.31
CLK1-210ENST00000473565 PDGFCQ9NRA1 345 aa6.84□□□□□ -1.31
CLK1-210ENST00000473565 AGPAT3Q9NRZ7 376 aa6.84□□□□□ -1.31
CLK1-210ENST00000473565 REXO2Q9Y3B8 237 aaKnown RBP6.84□□□□□ -1.31
CLK1-210ENST00000473565 LRRC53A6NM62 1247 aa6.84□□□□□ -1.31
CLK1-210ENST00000473565 MAFGO15525 162 aa6.84□□□□□ -1.31
CLK1-210ENST00000473565 PPP1R37O75864 691 aa6.84□□□□□ -1.31
CLK1-210ENST00000473565 SUPT20HL2P0C7V6 817 aa6.84□□□□□ -1.31
CLK1-210ENST00000473565 PLS3P13797 630 aa6.84□□□□□ -1.31
CLK1-210ENST00000473565 SLC9A1P19634 815 aa6.84□□□□□ -1.31
CLK1-210ENST00000473565 EDNRBP24530 442 aa6.84□□□□□ -1.31
CLK1-210ENST00000473565 MARK3P27448 753 aa6.84□□□□□ -1.31
CLK1-210ENST00000473565 NAA30Q147X3 362 aaPredicted RBP6.84□□□□□ -1.31
CLK1-210ENST00000473565 HAUS6Q7Z4H7 955 aa6.84□□□□□ -1.31
CLK1-210ENST00000473565 KCTD17Q8N5Z5 321 aa6.84□□□□□ -1.31
CLK1-210ENST00000473565 TMEM143Q96AN5 459 aa6.84□□□□□ -1.31
CLK1-210ENST00000473565 CCDC51Q96ER9 411 aa6.84□□□□□ -1.31
CLK1-210ENST00000473565 FAM84AQ96KN4 292 aa6.84□□□□□ -1.31
CLK1-210ENST00000473565 PTPN18Q99952 460 aa6.84□□□□□ -1.31
CLK1-210ENST00000473565 CBWD1Q9BRT8 395 aa6.84□□□□□ -1.31
CLK1-210ENST00000473565 GBP3Q9H0R5 595 aa6.84□□□□□ -1.31
CLK1-210ENST00000473565 XPNPEP1Q9NQW7 623 aa6.84□□□□□ -1.31
CLK1-210ENST00000473565 KCND1Q9NSA2 647 aa6.84□□□□□ -1.31
CLK1-210ENST00000473565 KCND2Q9NZV8 630 aa6.84□□□□□ -1.31
CLK1-210ENST00000473565 LARSQ9P2J5 1176 aaKnown RBP6.84□□□□□ -1.31
CLK1-210ENST00000473565 LRRC37A2A6NM11 1700 aa6.84□□□□□ -1.31
CLK1-210ENST00000473565 CEP350Q5VT06 3117 aa6.84□□□□□ -1.31
CLK1-210ENST00000473565 ADGRA3Q8IWK6 1321 aa6.84□□□□□ -1.32
CLK1-210ENST00000473565 BRCA2P51587 3418 aa6.84□□□□□ -1.32
CLK1-210ENST00000473565 GSTTP1A0A1W2PQM5 241 aa6.84□□□□□ -1.32
CLK1-210ENST00000473565 GOLGA8IPA6NC78 632 aa6.84□□□□□ -1.32
CLK1-210ENST00000473565 GOLGA8JA6NMD2 632 aa6.84□□□□□ -1.32
CLK1-210ENST00000473565 EIF3DO15371 548 aaKnown RBP eCLIP6.84□□□□□ -1.32
CLK1-210ENST00000473565 NOL4O94818 638 aa6.84□□□□□ -1.32
CLK1-210ENST00000473565 FARP2O94887 1054 aaPredicted RBP6.84□□□□□ -1.32
CLK1-210ENST00000473565 CCDC175P0C221 793 aa6.84□□□□□ -1.32
CLK1-210ENST00000473565 POLR2FP61218 127 aaKnown RBP6.84□□□□□ -1.32
CLK1-210ENST00000473565 GNG11P61952 73 aa6.84□□□□□ -1.32
CLK1-210ENST00000473565 CYP27A1Q02318 531 aa6.84□□□□□ -1.32
CLK1-210ENST00000473565 ARID5AQ03989 594 aa6.84□□□□□ -1.32
CLK1-210ENST00000473565 GJB7Q6PEY0 223 aa6.84□□□□□ -1.32
CLK1-210ENST00000473565 CYP26C1Q6V0L0 522 aa6.84□□□□□ -1.32
CLK1-210ENST00000473565 PPP4R3CPQ6ZMV5 832 aa6.84□□□□□ -1.32
CLK1-210ENST00000473565 SMAP1Q8IYB5 467 aaPredicted RBP6.84□□□□□ -1.32
CLK1-210ENST00000473565 FAM186BQ8IYM0 893 aa6.84□□□□□ -1.32
CLK1-210ENST00000473565 ATP6V0A1Q93050 837 aa6.84□□□□□ -1.32
CLK1-210ENST00000473565 ZBTB10Q96DT7 871 aa6.84□□□□□ -1.32
CLK1-210ENST00000473565 CDHR1Q96JP9 859 aa6.84□□□□□ -1.32
CLK1-210ENST00000473565 PCYT2Q99447 389 aa6.84□□□□□ -1.32
CLK1-210ENST00000473565 SENP7Q9BQF6 1050 aa6.84□□□□□ -1.32
CLK1-210ENST00000473565 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.84□□□□□ -1.322e-7■■■■■ 64.8
CLK1-210ENST00000473565 SEL1LQ9UBV2 794 aa6.84□□□□□ -1.32
CLK1-210ENST00000473565 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.84□□□□□ -1.32
CLK1-210ENST00000473565 V9GYY5 206 aaPredicted RBP6.84□□□□□ -1.32
CLK1-210ENST00000473565 NFASCO94856 1347 aa6.83□□□□□ -1.32
CLK1-210ENST00000473565 ZSCAN12O43309 604 aa6.83□□□□□ -1.32
CLK1-210ENST00000473565 PNMA6AP0CW24 399 aaPredicted RBP6.83□□□□□ -1.32
CLK1-210ENST00000473565 EPB41P11171 864 aaKnown RBP6.83□□□□□ -1.32
CLK1-210ENST00000473565 XRCC5P13010 732 aaKnown RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms