RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 RPS6KA5O75582 802 aa7.89□□□□□ -1.15
CKS1B-205ENST00000473344 PLEKHA8P1O95397 391 aa7.89□□□□□ -1.15
CKS1B-205ENST00000473344 GSPT1P15170 499 aaKnown RBP7.89□□□□□ -1.15
CKS1B-205ENST00000473344 MCM5P33992 734 aa7.89□□□□□ -1.15
CKS1B-205ENST00000473344 SARSP49591 514 aaKnown RBP7.89□□□□□ -1.15
CKS1B-205ENST00000473344 SLC26A2P50443 739 aa7.89□□□□□ -1.15
CKS1B-205ENST00000473344 PRSS12P56730 875 aa7.89□□□□□ -1.15
CKS1B-205ENST00000473344 ZXDAP98168 799 aa7.89□□□□□ -1.15
CKS1B-205ENST00000473344 UBE3AQ05086 875 aa7.89□□□□□ -1.15
CKS1B-205ENST00000473344 PLCB4Q15147 1175 aa7.89□□□□□ -1.15
CKS1B-205ENST00000473344 TMEM266Q2M3C6 531 aa7.89□□□□□ -1.15
CKS1B-205ENST00000473344 TTC22Q5TAA0 569 aa7.89□□□□□ -1.15
CKS1B-205ENST00000473344 FAM43BQ6ZT52 329 aaPredicted RBP7.89□□□□□ -1.15
CKS1B-205ENST00000473344 PLPPR4Q7Z2D5 763 aa7.89□□□□□ -1.15
CKS1B-205ENST00000473344 ZBTB33Q86T24 672 aa7.89□□□□□ -1.15
CKS1B-205ENST00000473344 RTN4RL1Q86UN2 441 aaPredicted RBP7.89□□□□□ -1.15
CKS1B-205ENST00000473344 MB21D2Q8IYB1 491 aaPredicted RBP7.89□□□□□ -1.15
CKS1B-205ENST00000473344 THNSL1Q8IYQ7 743 aa7.89□□□□□ -1.15
CKS1B-205ENST00000473344 SRBD1Q8N5C6 995 aaKnown RBP7.89□□□□□ -1.15
CKS1B-205ENST00000473344 TRAPPC12Q8WVT3 735 aa7.89□□□□□ -1.15
CKS1B-205ENST00000473344 LINC01599Q8WXQ3 324 aa7.89□□□□□ -1.15
CKS1B-205ENST00000473344 TMEM87BQ96K49 555 aa7.89□□□□□ -1.15
CKS1B-205ENST00000473344 NEK1Q96PY6 1258 aa7.89□□□□□ -1.15
CKS1B-205ENST00000473344 PHF7Q9BWX1 381 aaPredicted RBP7.89□□□□□ -1.15
CKS1B-205ENST00000473344 LY9Q9HBG7 655 aa7.89□□□□□ -1.15
CKS1B-205ENST00000473344 TLR9Q9NR96 1032 aa7.89□□□□□ -1.15
CKS1B-205ENST00000473344 KCNH7Q9NS40 1196 aa7.89□□□□□ -1.15
CKS1B-205ENST00000473344 PUF60Q9UHX1 559 aaKnown RBP7.89□□□□□ -1.15
CKS1B-205ENST00000473344 USP15Q9Y4E8 981 aaPredicted RBP7.89□□□□□ -1.15
CKS1B-205ENST00000473344 UBIAD1Q9Y5Z9 338 aa7.89□□□□□ -1.15
CKS1B-205ENST00000473344 SLC12A7Q9Y666 1083 aa7.89□□□□□ -1.15
CKS1B-205ENST00000473344 TAF6LQ9Y6J9 622 aa7.89□□□□□ -1.15
CKS1B-205ENST00000473344 CFAP54Q96N23 3096 aa7.88□□□□□ -1.15
CKS1B-205ENST00000473344 NLRC5Q86WI3 1866 aa7.88□□□□□ -1.15
CKS1B-205ENST00000473344 hCG_1642624A0A1W2PR95 340 aa7.88□□□□□ -1.15
CKS1B-205ENST00000473344 TBKBP1A7MCY6 615 aa7.88□□□□□ -1.15
CKS1B-205ENST00000473344 BACH1O14867 736 aa7.88□□□□□ -1.15
CKS1B-205ENST00000473344 GPR182O15218 404 aa7.88□□□□□ -1.15
CKS1B-205ENST00000473344 FGF18O76093 207 aa7.88□□□□□ -1.15
CKS1B-205ENST00000473344 HSP90AA1P07900 732 aaKnown RBP7.88□□□□□ -1.15
CKS1B-205ENST00000473344 RXRAP19793 462 aa7.88□□□□□ -1.15
CKS1B-205ENST00000473344 CHMLP26374 656 aa7.88□□□□□ -1.15
CKS1B-205ENST00000473344 KLRC1P26715 233 aa7.88□□□□□ -1.15
CKS1B-205ENST00000473344 ZNF76P36508 570 aa7.88□□□□□ -1.15
CKS1B-205ENST00000473344 GATMP50440 423 aa7.88□□□□□ -1.15
CKS1B-205ENST00000473344 ANTXR2P58335 489 aa7.88□□□□□ -1.15
CKS1B-205ENST00000473344 ACTR2P61160 394 aa7.88□□□□□ -1.15
CKS1B-205ENST00000473344 SIGLEC14Q08ET2 396 aa7.88□□□□□ -1.15
CKS1B-205ENST00000473344 FAM160B1Q5W0V3 765 aa7.88□□□□□ -1.15
CKS1B-205ENST00000473344 PDE12Q6L8Q7 609 aaKnown RBP7.88□□□□□ -1.15
CKS1B-205ENST00000473344 MTHFD1LQ6UB35 978 aa7.88□□□□□ -1.15
CKS1B-205ENST00000473344 SYNE3Q6ZMZ3 975 aa7.88□□□□□ -1.15
CKS1B-205ENST00000473344 SLC24A5Q71RS6 500 aa7.88□□□□□ -1.15
CKS1B-205ENST00000473344 CRIPAKQ8N1N5 446 aa7.88□□□□□ -1.15
CKS1B-205ENST00000473344 FBXL6Q8N531 539 aa7.88□□□□□ -1.15
CKS1B-205ENST00000473344 PRSS33Q8NF86 280 aa7.88□□□□□ -1.15
CKS1B-205ENST00000473344 EXOC6Q8TAG9 804 aa7.88□□□□□ -1.15
CKS1B-205ENST00000473344 MAP4K1Q92918 833 aa7.88□□□□□ -1.15
CKS1B-205ENST00000473344 CDCA3Q99618 268 aaPredicted RBP7.88□□□□□ -1.15
CKS1B-205ENST00000473344 ADAM2Q99965 735 aa7.88□□□□□ -1.15
CKS1B-205ENST00000473344 MXRA8Q9BRK3 442 aa7.88□□□□□ -1.15
CKS1B-205ENST00000473344 MTA3Q9BTC8 594 aa7.88□□□□□ -1.15
CKS1B-205ENST00000473344 IRF2BPLQ9H1B7 796 aa7.88□□□□□ -1.15
CKS1B-205ENST00000473344 C1orf112Q9NSG2 853 aa7.88□□□□□ -1.15
CKS1B-205ENST00000473344 TMEM260Q9NX78 707 aa7.88□□□□□ -1.15
CKS1B-205ENST00000473344 RBM8AQ9Y5S9 174 aaKnown RBP7.88□□□□□ -1.15
CKS1B-205ENST00000473344 NFASCO94856 1347 aa7.87□□□□□ -1.15
CKS1B-205ENST00000473344 KDM3AQ9Y4C1 1321 aa7.87□□□□□ -1.15
CKS1B-205ENST00000473344 MUC6Q6W4X9 2439 aa7.87□□□□□ -1.15
CKS1B-205ENST00000473344 DDX39AO00148 427 aaKnown RBP7.87□□□□□ -1.15
CKS1B-205ENST00000473344 SH2B2O14492 632 aaPredicted RBP7.87□□□□□ -1.15
CKS1B-205ENST00000473344 SGSM2O43147 1006 aa7.87□□□□□ -1.15
CKS1B-205ENST00000473344 HBP1O60381 514 aa7.87□□□□□ -1.15
CKS1B-205ENST00000473344 GLP2RO95838 553 aa7.87□□□□□ -1.15
CKS1B-205ENST00000473344 FOSP01100 380 aaPredicted RBP7.87□□□□□ -1.15
CKS1B-205ENST00000473344 ATF7P17544 494 aaPredicted RBP7.87□□□□□ -1.15
CKS1B-205ENST00000473344 NCLP19338 710 aaKnown RBP7.87□□□□□ -1.15
CKS1B-205ENST00000473344 LIFRP42702 1097 aa7.87□□□□□ -1.15
CKS1B-205ENST00000473344 NAPAP54920 295 aa7.87□□□□□ -1.15
CKS1B-205ENST00000473344 KRT17Q04695 432 aa7.87□□□□□ -1.15
CKS1B-205ENST00000473344 CBX2Q14781 532 aaPredicted RBP7.87□□□□□ -1.15
CKS1B-205ENST00000473344 CEP55Q53EZ4 464 aa7.87□□□□□ -1.15
CKS1B-205ENST00000473344 RAB11FIP4Q86YS3 637 aa7.87□□□□□ -1.15
CKS1B-205ENST00000473344 CKAP2LQ8IYA6 745 aa7.87□□□□□ -1.15
CKS1B-205ENST00000473344 ABI1Q8IZP0 508 aa7.87□□□□□ -1.15
CKS1B-205ENST00000473344 FANCBQ8NB91 859 aa7.87□□□□□ -1.15
CKS1B-205ENST00000473344 PCYT2Q99447 389 aa7.87□□□□□ -1.15
CKS1B-205ENST00000473344 PHOX2BQ99453 314 aa7.87□□□□□ -1.15
CKS1B-205ENST00000473344 TCF25Q9BQ70 676 aa7.87□□□□□ -1.15
CKS1B-205ENST00000473344 TMX1Q9H3N1 280 aa7.87□□□□□ -1.15
CKS1B-205ENST00000473344 IL21Q9HBE4 155 aa7.87□□□□□ -1.15
CKS1B-205ENST00000473344 ATP6V0A4Q9HBG4 840 aa7.87□□□□□ -1.15
CKS1B-205ENST00000473344 AGO4Q9HCK5 861 aaKnown RBP7.87□□□□□ -1.15
CKS1B-205ENST00000473344 RTN4Q9NQC3 1192 aaKnown RBP7.87□□□□□ -1.15
CKS1B-205ENST00000473344 ENTPD7Q9NQZ7 604 aa7.87□□□□□ -1.15
CKS1B-205ENST00000473344 RGS18Q9NS28 235 aa7.87□□□□□ -1.15
CKS1B-205ENST00000473344 TYW1Q9NV66 732 aaKnown RBP7.87□□□□□ -1.15
CKS1B-205ENST00000473344 TCEAL9Q9UHQ7 104 aa7.87□□□□□ -1.15
CKS1B-205ENST00000473344 ST3GAL5Q9UNP4 418 aa7.87□□□□□ -1.15
CKS1B-205ENST00000473344 PCDHGC5Q9Y5F6 944 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms