RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 GFPT2O94808 682 aa23■■□□□ 1.27
COL18A1-207ENST00000473212 ADRA2BP18089 450 aa23■■□□□ 1.27
COL18A1-207ENST00000473212 UBXN2AP68543 259 aa23■■□□□ 1.27
COL18A1-207ENST00000473212 ZNF844Q08AG5 666 aa23■■□□□ 1.27
COL18A1-207ENST00000473212 CALR3Q96L12 384 aaKnown RBP23■■□□□ 1.27
COL18A1-207ENST00000473212 BCCIPQ9P287 314 aaKnown RBP eCLIP23■■□□□ 1.27
COL18A1-207ENST00000473212 THSD7AQ9UPZ6 1657 aa23■■□□□ 1.27
COL18A1-207ENST00000473212 FAM107AO95990 144 aa23■■□□□ 1.27
COL18A1-207ENST00000473212 ICA1Q05084 483 aa23■■□□□ 1.27
COL18A1-207ENST00000473212 RNF187Q5TA31 235 aaPredicted RBP23■■□□□ 1.27
COL18A1-207ENST00000473212 MCTP2Q6DN12 878 aa23■■□□□ 1.27
COL18A1-207ENST00000473212 PRPF38AQ8NAV1 312 aaKnown RBP23■■□□□ 1.27
COL18A1-207ENST00000473212 UBLCP1Q8WVY7 318 aaPredicted RBP23■■□□□ 1.27
COL18A1-207ENST00000473212 FBXL5Q9UKA1 691 aa23■■□□□ 1.27
COL18A1-207ENST00000473212 VAV3Q9UKW4 847 aa23■■□□□ 1.27
COL18A1-207ENST00000473212 DDX3XO00571 662 aaKnown RBP eCLIP22.99■■□□□ 1.27
COL18A1-207ENST00000473212 DAPK3O43293 454 aa22.99■■□□□ 1.27
COL18A1-207ENST00000473212 TGFB1I1O43294 461 aa22.99■■□□□ 1.27
COL18A1-207ENST00000473212 NDUFB10O96000 172 aa22.99■■□□□ 1.27
COL18A1-207ENST00000473212 PRKCIP41743 596 aa22.99■■□□□ 1.27
COL18A1-207ENST00000473212 MYO3BQ8WXR4 1341 aa22.99■■□□□ 1.27
COL18A1-207ENST00000473212 CALUO43852 315 aaPredicted RBP22.99■■□□□ 1.27
COL18A1-207ENST00000473212 FSBPO95073 299 aa22.99■■□□□ 1.27
COL18A1-207ENST00000473212 RRP1BQ14684 758 aaKnown RBP22.99■■□□□ 1.27
COL18A1-207ENST00000473212 OLIG1Q8TAK6 271 aa22.99■■□□□ 1.27
COL18A1-207ENST00000473212 LRRC4CQ9HCJ2 640 aa22.99■■□□□ 1.27
COL18A1-207ENST00000473212 OSGEPQ9NPF4 335 aa22.99■■□□□ 1.27
COL18A1-207ENST00000473212 BHMG1C9JSJ3 638 aaPredicted RBP22.98■■□□□ 1.27
COL18A1-207ENST00000473212 G3V3G9 751 aa22.98■■□□□ 1.27
COL18A1-207ENST00000473212 H2AFZP0C0S5 128 aa22.98■■□□□ 1.27
COL18A1-207ENST00000473212 IFT88Q13099 833 aa22.98■■□□□ 1.27
COL18A1-207ENST00000473212 DCAF8Q5TAQ9 597 aa22.98■■□□□ 1.27
COL18A1-207ENST00000473212 H2AFVQ71UI9 128 aa22.98■■□□□ 1.27
COL18A1-207ENST00000473212 DAAM2Q86T65 1068 aa22.98■■□□□ 1.27
COL18A1-207ENST00000473212 ARFGAP2Q8N6H7 521 aa22.98■■□□□ 1.27
COL18A1-207ENST00000473212 U2AF1L4Q8WU68 220 aaKnown RBP22.98■■□□□ 1.27
COL18A1-207ENST00000473212 EIF2AK1Q9BQI3 630 aaKnown RBP22.98■■□□□ 1.27
COL18A1-207ENST00000473212 AMNQ9BXJ7 453 aa22.98■■□□□ 1.27
COL18A1-207ENST00000473212 ZNF219Q9P2Y4 722 aaPredicted RBP22.98■■□□□ 1.27
COL18A1-207ENST00000473212 KLRG2A4D1S0 409 aaPredicted RBP22.98■■□□□ 1.27
COL18A1-207ENST00000473212 SPDYE3A6NKU9 549 aa22.98■■□□□ 1.27
COL18A1-207ENST00000473212 HHIPL2Q6UWX4 724 aa22.98■■□□□ 1.27
COL18A1-207ENST00000473212 CELF4Q9BZC1 486 aaKnown RBP22.98■■□□□ 1.27
COL18A1-207ENST00000473212 NENFQ9UMX5 172 aa22.98■■□□□ 1.27
COL18A1-207ENST00000473212 STXBP5LQ9Y2K9 1186 aa22.98■■□□□ 1.27
COL18A1-207ENST00000473212 NR2E1Q9Y466 385 aa22.98■■□□□ 1.27
COL18A1-207ENST00000473212 LRRC37AA6NMS7 1700 aa22.97■■□□□ 1.27
COL18A1-207ENST00000473212 PDXKO00764 312 aa22.97■■□□□ 1.27
COL18A1-207ENST00000473212 TTI1O43156 1089 aa22.97■■□□□ 1.27
COL18A1-207ENST00000473212 TMOD1P28289 359 aa22.97■■□□□ 1.27
COL18A1-207ENST00000473212 MNAT1P51948 309 aa22.97■■□□□ 1.27
COL18A1-207ENST00000473212 YTHDF3Q7Z739 585 aaKnown RBP22.97■■□□□ 1.27
COL18A1-207ENST00000473212 SLFN11Q7Z7L1 901 aa22.97■■□□□ 1.27
COL18A1-207ENST00000473212 FBXO11Q86XK2 927 aa22.97■■□□□ 1.27
COL18A1-207ENST00000473212 LNX1Q8TBB1 728 aaPredicted RBP22.97■■□□□ 1.27
COL18A1-207ENST00000473212 ZMYM2Q9UBW7 1377 aa22.97■■□□□ 1.27
COL18A1-207ENST00000473212 KIF13BQ9NQT8 1826 aa22.97■■□□□ 1.27
COL18A1-207ENST00000473212 CCDC188H7C350 402 aa22.97■■□□□ 1.27
COL18A1-207ENST00000473212 COPB2P35606 906 aa22.97■■□□□ 1.27
COL18A1-207ENST00000473212 JAM2P57087 298 aa22.97■■□□□ 1.27
COL18A1-207ENST00000473212 VPS36Q86VN1 386 aa22.97■■□□□ 1.27
COL18A1-207ENST00000473212 LMBR1Q8WVP7 490 aa22.97■■□□□ 1.27
COL18A1-207ENST00000473212 MKL1Q969V6 931 aa22.97■■□□□ 1.27
COL18A1-207ENST00000473212 CCDC17Q96LX7 622 aa22.97■■□□□ 1.27
COL18A1-207ENST00000473212 IGSF9BQ9UPX0 1349 aa22.96■■□□□ 1.27
COL18A1-207ENST00000473212 A0A1W2PRG0 241 aa22.96■■□□□ 1.27
COL18A1-207ENST00000473212 AP3B2Q13367 1082 aa22.96■■□□□ 1.27
COL18A1-207ENST00000473212 Q4G0T1 1027 aa22.96■■□□□ 1.27
COL18A1-207ENST00000473212 ODF2Q5BJF6 829 aa22.96■■□□□ 1.27
COL18A1-207ENST00000473212 ADAT2Q7Z6V5 191 aaKnown RBP22.96■■□□□ 1.27
COL18A1-207ENST00000473212 NT5DC3Q86UY8 548 aa22.96■■□□□ 1.27
COL18A1-207ENST00000473212 RASGEF1CQ8N431 466 aa22.96■■□□□ 1.27
COL18A1-207ENST00000473212 DCAF4Q8WV16 495 aa22.96■■□□□ 1.27
COL18A1-207ENST00000473212 CYFIP2Q96F07 1278 aa22.96■■□□□ 1.27
COL18A1-207ENST00000473212 TYW1Q9NV66 732 aaKnown RBP22.96■■□□□ 1.27
COL18A1-207ENST00000473212 SUCLA2Q9P2R7 463 aaPredicted RBP22.96■■□□□ 1.27
COL18A1-207ENST00000473212 SLC12A6Q9UHW9 1150 aa22.96■■□□□ 1.27
COL18A1-207ENST00000473212 SUGT1Q9Y2Z0 365 aa22.96■■□□□ 1.27
COL18A1-207ENST00000473212 RABGAP1Q9Y3P9 1069 aa22.96■■□□□ 1.27
COL18A1-207ENST00000473212 SLC26A4O43511 780 aa22.96■■□□□ 1.27
COL18A1-207ENST00000473212 SREBF1P36956 1147 aa22.96■■□□□ 1.27
COL18A1-207ENST00000473212 RINT1Q6NUQ1 792 aa22.96■■□□□ 1.27
COL18A1-207ENST00000473212 GLYCTKQ8IVS8 523 aa22.96■■□□□ 1.27
COL18A1-207ENST00000473212 TPH2Q8IWU9 490 aa22.96■■□□□ 1.27
COL18A1-207ENST00000473212 ERMNQ8TAM6 284 aa22.96■■□□□ 1.27
COL18A1-207ENST00000473212 GJD4Q96KN9 370 aaPredicted RBP22.96■■□□□ 1.27
COL18A1-207ENST00000473212 WDR18Q9BV38 432 aa22.96■■□□□ 1.27
COL18A1-207ENST00000473212 NYAP2Q9P242 653 aa22.96■■□□□ 1.27
COL18A1-207ENST00000473212 ANKRD31Q8N7Z5 1873 aa22.95■■□□□ 1.27
COL18A1-207ENST00000473212 LRRN2O75325 713 aa22.95■■□□□ 1.26
COL18A1-207ENST00000473212 TRIM49P0CI25 452 aa22.95■■□□□ 1.26
COL18A1-207ENST00000473212 TRIM49CP0CI26 452 aa22.95■■□□□ 1.26
COL18A1-207ENST00000473212 SAMD1Q6SPF0 538 aaPredicted RBP22.95■■□□□ 1.26
COL18A1-207ENST00000473212 RUFY4Q6ZNE9 571 aa22.95■■□□□ 1.26
COL18A1-207ENST00000473212 PALB2Q86YC2 1186 aa22.95■■□□□ 1.26
COL18A1-207ENST00000473212 SEPT12Q8IYM1 358 aa22.95■■□□□ 1.26
COL18A1-207ENST00000473212 CEP89Q96ST8 783 aa22.95■■□□□ 1.26
COL18A1-207ENST00000473212 DPH5Q9H2P9 285 aa22.95■■□□□ 1.26
COL18A1-207ENST00000473212 QSER1Q2KHR3 1735 aa22.95■■□□□ 1.26
COL18A1-207ENST00000473212 EVI5O60447 810 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms