RNA–Protein interactions for RNA: ENST00000472729.1

COMMD1-208, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 629 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-208ENST00000472729 C17orf80Q9BSJ5 609 aa21.82■■□□□ 1.08
COMMD1-208ENST00000472729 NIFKQ9BYG3 293 aaKnown RBP21.82■■□□□ 1.08
COMMD1-208ENST00000472729 LMCD1Q9NZU5 365 aa21.82■■□□□ 1.08
COMMD1-208ENST00000472729 THEGQ9P2T0 379 aa21.82■■□□□ 1.08
COMMD1-208ENST00000472729 PCDHA12Q9UN75 941 aa21.82■■□□□ 1.08
COMMD1-208ENST00000472729 ST3GAL5Q9UNP4 418 aa21.82■■□□□ 1.08
COMMD1-208ENST00000472729 KIF3AQ9Y496 699 aa21.82■■□□□ 1.08
COMMD1-208ENST00000472729 ZSCAN20P17040 1043 aaPredicted RBP21.81■■□□□ 1.08
COMMD1-208ENST00000472729 ATP2B1P20020 1258 aa21.81■■□□□ 1.08
COMMD1-208ENST00000472729 POU3F3P20264 500 aaPredicted RBP21.81■■□□□ 1.08
COMMD1-208ENST00000472729 RBM25P49756 843 aaKnown RBP21.81■■□□□ 1.08
COMMD1-208ENST00000472729 GUCY1B3Q02153 619 aa21.81■■□□□ 1.08
COMMD1-208ENST00000472729 OTUD6AQ7L8S5 288 aa21.81■■□□□ 1.08
COMMD1-208ENST00000472729 ATXN2LQ8WWM7 1075 aaKnown RBP21.81■■□□□ 1.08
COMMD1-208ENST00000472729 C1orf112Q9NSG2 853 aa21.81■■□□□ 1.08
COMMD1-208ENST00000472729 NOC2LQ9Y3T9 749 aaKnown RBP21.81■■□□□ 1.08
COMMD1-208ENST00000472729 TET1Q8NFU7 2136 aa21.8■■□□□ 1.08
COMMD1-208ENST00000472729 RBAK-RBAKDNI3L0D1 243 aa21.8■■□□□ 1.08
COMMD1-208ENST00000472729 NEMFO60524 1076 aa21.8■■□□□ 1.08
COMMD1-208ENST00000472729 AAK1Q2M2I8 961 aa21.8■■□□□ 1.08
COMMD1-208ENST00000472729 EPC2Q52LR7 807 aa21.8■■□□□ 1.08
COMMD1-208ENST00000472729 EARS2Q5JPH6 523 aaKnown RBP21.8■■□□□ 1.08
COMMD1-208ENST00000472729 TMEM192Q8IY95 271 aa21.8■■□□□ 1.08
COMMD1-208ENST00000472729 SLC7A3Q8WY07 619 aa21.8■■□□□ 1.08
COMMD1-208ENST00000472729 CCDC43Q96MW1 224 aaKnown RBP21.8■■□□□ 1.08
COMMD1-208ENST00000472729 ADAM2Q99965 735 aa21.8■■□□□ 1.08
COMMD1-208ENST00000472729 CDHR5Q9HBB8 845 aa21.8■■□□□ 1.08
COMMD1-208ENST00000472729 ADGRA3Q8IWK6 1321 aa21.8■■□□□ 1.08
COMMD1-208ENST00000472729 GPR32O75388 356 aa21.79■■□□□ 1.08
COMMD1-208ENST00000472729 CTNNB1P35222 781 aa21.79■■□□□ 1.08
COMMD1-208ENST00000472729 MRPS5P82675 430 aaKnown RBP21.79■■□□□ 1.08
COMMD1-208ENST00000472729 EPHA7Q15375 998 aa21.79■■□□□ 1.08
COMMD1-208ENST00000472729 B3GNT9Q6UX72 402 aa21.79■■□□□ 1.08
COMMD1-208ENST00000472729 SPRED2Q7Z698 418 aa21.79■■□□□ 1.08
COMMD1-208ENST00000472729 CEP170P1Q96L14 293 aa21.79■■□□□ 1.08
COMMD1-208ENST00000472729 VAV3Q9UKW4 847 aa21.79■■□□□ 1.08
COMMD1-208ENST00000472729 FAM205CA6NFA0 338 aa21.78■■□□□ 1.08
COMMD1-208ENST00000472729 EML1O00423 815 aa21.78■■□□□ 1.08
COMMD1-208ENST00000472729 DGKIO75912 1065 aa21.78■■□□□ 1.08
COMMD1-208ENST00000472729 EIF4BP23588 611 aaKnown RBP21.78■■□□□ 1.08
COMMD1-208ENST00000472729 TXKP42681 527 aa21.78■■□□□ 1.08
COMMD1-208ENST00000472729 GPM6BQ13491 265 aa21.78■■□□□ 1.08
COMMD1-208ENST00000472729 SLC24A5Q71RS6 500 aa21.78■■□□□ 1.08
COMMD1-208ENST00000472729 TMEM40Q8WWA1 233 aa21.78■■□□□ 1.08
COMMD1-208ENST00000472729 HAS1Q92839 578 aa21.78■■□□□ 1.08
COMMD1-208ENST00000472729 TNFRSF25Q93038 417 aa21.78■■□□□ 1.08
COMMD1-208ENST00000472729 C11orf84Q9BUA3 381 aaPredicted RBP21.78■■□□□ 1.08
COMMD1-208ENST00000472729 GCOM2Q9BZD3 368 aaPredicted RBP21.78■■□□□ 1.08
COMMD1-208ENST00000472729 ZSWIM4Q9H7M6 989 aa21.78■■□□□ 1.08
COMMD1-208ENST00000472729 ERVK-5Q9HDB9 667 aa21.78■■□□□ 1.08
COMMD1-208ENST00000472729 PPME1Q9Y570 386 aa21.78■■□□□ 1.08
COMMD1-208ENST00000472729 SARSP49591 514 aaKnown RBP21.77■■□□□ 1.08
COMMD1-208ENST00000472729 POLGP54098 1239 aaPredicted RBP21.77■■□□□ 1.08
COMMD1-208ENST00000472729 TARBP2Q15633 366 aaKnown RBP21.77■■□□□ 1.08
COMMD1-208ENST00000472729 TJAP1Q5JTD0 557 aa21.77■■□□□ 1.08
COMMD1-208ENST00000472729 RTN4RL1Q86UN2 441 aaPredicted RBP21.77■■□□□ 1.08
COMMD1-208ENST00000472729 TPH2Q8IWU9 490 aa21.77■■□□□ 1.08
COMMD1-208ENST00000472729 SH2D3AQ9BRG2 576 aa21.77■■□□□ 1.08
COMMD1-208ENST00000472729 LXNQ9BS40 222 aa21.77■■□□□ 1.08
COMMD1-208ENST00000472729 INO80BQ9C086 356 aaPredicted RBP21.77■■□□□ 1.08
COMMD1-208ENST00000472729 FOXP1Q9H334 677 aaPredicted RBP21.77■■□□□ 1.08
COMMD1-208ENST00000472729 TMX1Q9H3N1 280 aa21.77■■□□□ 1.08
COMMD1-208ENST00000472729 TTC12Q9H892 705 aaPredicted RBP21.77■■□□□ 1.08
COMMD1-208ENST00000472729 PRDM6Q9NQX0 595 aa21.77■■□□□ 1.08
COMMD1-208ENST00000472729 CYP26B1Q9NR63 512 aa21.77■■□□□ 1.08
COMMD1-208ENST00000472729 SUCLA2Q9P2R7 463 aaPredicted RBP21.77■■□□□ 1.08
COMMD1-208ENST00000472729 NOL7Q9UMY1 257 aaKnown RBP21.77■■□□□ 1.08
COMMD1-208ENST00000472729 COG5Q9UP83 839 aa21.77■■□□□ 1.08
COMMD1-208ENST00000472729 RB1P06400 928 aa21.76■■□□□ 1.07
COMMD1-208ENST00000472729 YWHABP31946 246 aaKnown RBP21.76■■□□□ 1.07
COMMD1-208ENST00000472729 MCM7P33993 719 aa21.76■■□□□ 1.07
COMMD1-208ENST00000472729 GPC3P51654 580 aa21.76■■□□□ 1.07
COMMD1-208ENST00000472729 SPOUT1Q5T280 376 aaKnown RBP21.76■■□□□ 1.07
COMMD1-208ENST00000472729 PLA2G4FQ68DD2 849 aa21.76■■□□□ 1.07
COMMD1-208ENST00000472729 ANO5Q75V66 913 aa21.76■■□□□ 1.07
COMMD1-208ENST00000472729 FAM228AQ86W67 206 aa21.76■■□□□ 1.07
COMMD1-208ENST00000472729 RHPN2Q8IUC4 686 aa21.76■■□□□ 1.07
COMMD1-208ENST00000472729 LINC01599Q8WXQ3 324 aa21.76■■□□□ 1.07
COMMD1-208ENST00000472729 KAT6AQ92794 2004 aa21.76■■□□□ 1.07
COMMD1-208ENST00000472729 ZNF668Q96K58 619 aaPredicted RBP21.76■■□□□ 1.07
COMMD1-208ENST00000472729 KIF2CQ99661 725 aa21.76■■□□□ 1.07
COMMD1-208ENST00000472729 ATP6V0A4Q9HBG4 840 aa21.76■■□□□ 1.07
COMMD1-208ENST00000472729 RGS18Q9NS28 235 aa21.76■■□□□ 1.07
COMMD1-208ENST00000472729 TMEM150BA6NC51 233 aa21.75■■□□□ 1.07
COMMD1-208ENST00000472729 H3BNC9 293 aa21.75■■□□□ 1.07
COMMD1-208ENST00000472729 LPXNO60711 386 aa21.75■■□□□ 1.07
COMMD1-208ENST00000472729 MAFO75444 373 aaPredicted RBP21.75■■□□□ 1.07
COMMD1-208ENST00000472729 SFPQP23246 707 aaKnown RBP eCLIP21.75■■□□□ 1.07
COMMD1-208ENST00000472729 BMPR1AP36894 532 aa21.75■■□□□ 1.07
COMMD1-208ENST00000472729 RFC5P40937 340 aa21.75■■□□□ 1.07
COMMD1-208ENST00000472729 CYP4A11Q02928 519 aa21.75■■□□□ 1.07
COMMD1-208ENST00000472729 ST3GAL1Q11201 340 aa21.75■■□□□ 1.07
COMMD1-208ENST00000472729 PAN2Q504Q3 1202 aaKnown RBP21.75■■□□□ 1.07
COMMD1-208ENST00000472729 C4orf19Q8IY42 314 aa21.75■■□□□ 1.07
COMMD1-208ENST00000472729 CMTR2Q8IYT2 770 aaKnown RBP21.75■■□□□ 1.07
COMMD1-208ENST00000472729 FBXO18Q8NFZ0 1043 aa21.75■■□□□ 1.07
COMMD1-208ENST00000472729 HLA-CQ95604 372 aa21.75■■□□□ 1.07
COMMD1-208ENST00000472729 MRPL38Q96DV4 380 aaKnown RBP21.75■■□□□ 1.07
COMMD1-208ENST00000472729 DYDC2Q96IM9 177 aa21.75■■□□□ 1.07
COMMD1-208ENST00000472729 ASB2Q96Q27 587 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms