RNA–Protein interactions for RNA: ENST00000472490.1

BRCA1-211, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-211ENST00000472490 AK8Q96MA6 479 aa15.86■□□□□ 0.13
BRCA1-211ENST00000472490 IFIH1Q9BYX4 1025 aaKnown RBP15.86■□□□□ 0.13
BRCA1-211ENST00000472490 IGKV6-21A0A0C4DH24 114 aa15.85■□□□□ 0.13
BRCA1-211ENST00000472490 TMEM150BA6NC51 233 aa15.85■□□□□ 0.13
BRCA1-211ENST00000472490 VWA3AA6NCI4 1184 aa15.85■□□□□ 0.13
BRCA1-211ENST00000472490 DGAT1O75907 488 aa15.85■□□□□ 0.13
BRCA1-211ENST00000472490 SPATA31C1P0DKV0 1188 aa15.85■□□□□ 0.13
BRCA1-211ENST00000472490 ZSCAN22P10073 491 aaPredicted RBP15.85■□□□□ 0.13
BRCA1-211ENST00000472490 KCNJ6P48051 423 aa15.85■□□□□ 0.13
BRCA1-211ENST00000472490 CLCN3P51790 818 aa15.85■□□□□ 0.13
BRCA1-211ENST00000472490 NPEPPSP55786 919 aa15.85■□□□□ 0.13
BRCA1-211ENST00000472490 SMAD3P84022 425 aaKnown RBP15.85■□□□□ 0.13
BRCA1-211ENST00000472490 TMEM62Q0P6H9 643 aa15.85■□□□□ 0.13
BRCA1-211ENST00000472490 FBXO47Q5MNV8 452 aa15.85■□□□□ 0.13
BRCA1-211ENST00000472490 LRRC71Q8N4P6 559 aa15.85■□□□□ 0.13
BRCA1-211ENST00000472490 DBF4BQ8NFT6 615 aa15.85■□□□□ 0.13
BRCA1-211ENST00000472490 PHOSPHO2Q8TCD6 241 aa15.85■□□□□ 0.13
BRCA1-211ENST00000472490 SNX29Q8TEQ0 813 aa15.85■□□□□ 0.13
BRCA1-211ENST00000472490 ZNF396Q96N95 335 aaPredicted RBP15.85■□□□□ 0.13
BRCA1-211ENST00000472490 CEP89Q96ST8 783 aa15.85■□□□□ 0.13
BRCA1-211ENST00000472490 DHX33Q9H6R0 707 aaKnown RBP15.85■□□□□ 0.13
BRCA1-211ENST00000472490 DBR1Q9UK59 544 aaKnown RBP15.85■□□□□ 0.13
BRCA1-211ENST00000472490 GINS2Q9Y248 185 aa15.85■□□□□ 0.13
BRCA1-211ENST00000472490 MED24O75448 989 aa15.84■□□□□ 0.13
BRCA1-211ENST00000472490 VTNP04004 478 aa15.84■□□□□ 0.13
BRCA1-211ENST00000472490 GHRP10912 638 aa15.84■□□□□ 0.13
BRCA1-211ENST00000472490 LONP1P36776 959 aaKnown RBP15.84■□□□□ 0.13
BRCA1-211ENST00000472490 LINC01465Q8N7H1 131 aa15.84■□□□□ 0.13
BRCA1-211ENST00000472490 VWCEQ96DN2 955 aa15.84■□□□□ 0.13
BRCA1-211ENST00000472490 SCLT1Q96NL6 688 aa15.84■□□□□ 0.13
BRCA1-211ENST00000472490 SLC9A7Q96T83 725 aa15.84■□□□□ 0.13
BRCA1-211ENST00000472490 SH2D3AQ9BRG2 576 aa15.84■□□□□ 0.13
BRCA1-211ENST00000472490 FTHL17Q9BXU8 183 aa15.84■□□□□ 0.13
BRCA1-211ENST00000472490 GPR182O15218 404 aa15.83■□□□□ 0.12
BRCA1-211ENST00000472490 SLC26A4O43511 780 aa15.83■□□□□ 0.12
BRCA1-211ENST00000472490 ATP2A2P16615 1042 aaKnown RBP15.83■□□□□ 0.12
BRCA1-211ENST00000472490 RARRES1P49788 294 aa15.83■□□□□ 0.12
BRCA1-211ENST00000472490 NLRP11P59045 1033 aaKnown RBP15.83■□□□□ 0.12
BRCA1-211ENST00000472490 PAK2Q13177 524 aa15.83■□□□□ 0.12
BRCA1-211ENST00000472490 LPIN1Q14693 890 aa15.83■□□□□ 0.12
BRCA1-211ENST00000472490 IL17AQ16552 155 aa15.83■□□□□ 0.12
BRCA1-211ENST00000472490 KIZQ2M2Z5 673 aa15.83■□□□□ 0.12
BRCA1-211ENST00000472490 ATL3Q6DD88 541 aa15.83■□□□□ 0.12
BRCA1-211ENST00000472490 GPR153Q6NV75 609 aa15.83■□□□□ 0.12
BRCA1-211ENST00000472490 PIGOQ8TEQ8 1089 aa15.83■□□□□ 0.12
BRCA1-211ENST00000472490 NLRP7Q8WX94 980 aa15.83■□□□□ 0.12
BRCA1-211ENST00000472490 PSPC1Q8WXF1 523 aaKnown RBP15.83■□□□□ 0.12
BRCA1-211ENST00000472490 CDK5RAP3Q96JB5 506 aa15.83■□□□□ 0.12
BRCA1-211ENST00000472490 MTRQ99707 1265 aa15.83■□□□□ 0.12
BRCA1-211ENST00000472490 NT5C3AQ9H0P0 336 aa15.83■□□□□ 0.12
BRCA1-211ENST00000472490 ATP6V0A4Q9HBG4 840 aa15.83■□□□□ 0.12
BRCA1-211ENST00000472490 CXXC1Q9P0U4 656 aaPredicted RBP15.83■□□□□ 0.12
BRCA1-211ENST00000472490 SUCLA2Q9P2R7 463 aaPredicted RBP15.83■□□□□ 0.12
BRCA1-211ENST00000472490 DNM3Q9UQ16 869 aa15.83■□□□□ 0.12
BRCA1-211ENST00000472490 CLIC4Q9Y696 253 aa15.83■□□□□ 0.12
BRCA1-211ENST00000472490 ARHGEF35A5YM69 484 aa15.82■□□□□ 0.12
BRCA1-211ENST00000472490 ZBTB39O15060 712 aa15.82■□□□□ 0.12
BRCA1-211ENST00000472490 ASAP2O43150 1006 aa15.82■□□□□ 0.12
BRCA1-211ENST00000472490 GPR32O75388 356 aa15.82■□□□□ 0.12
BRCA1-211ENST00000472490 RPS6KA5O75582 802 aa15.82■□□□□ 0.12
BRCA1-211ENST00000472490 F13A1P00488 732 aa15.82■□□□□ 0.12
BRCA1-211ENST00000472490 AMHP03971 560 aa15.82■□□□□ 0.12
BRCA1-211ENST00000472490 UBA7P41226 1012 aa15.82■□□□□ 0.12
BRCA1-211ENST00000472490 GPC3P51654 580 aa15.82■□□□□ 0.12
BRCA1-211ENST00000472490 MXD4Q14582 209 aaPredicted RBP15.82■□□□□ 0.12
BRCA1-211ENST00000472490 EMC2Q15006 297 aa15.82■□□□□ 0.12
BRCA1-211ENST00000472490 POTEGQ6S5H5 508 aa15.82■□□□□ 0.12
BRCA1-211ENST00000472490 ZNF410Q86VK4 478 aa15.82■□□□□ 0.12
BRCA1-211ENST00000472490 RHPN2Q8IUC4 686 aa15.82■□□□□ 0.12
BRCA1-211ENST00000472490 GCOM2Q9BZD3 368 aaPredicted RBP15.82■□□□□ 0.12
BRCA1-211ENST00000472490 INO80BQ9C086 356 aaPredicted RBP15.82■□□□□ 0.12
BRCA1-211ENST00000472490 KIAA1024Q9UPX6 916 aa15.82■□□□□ 0.12
BRCA1-211ENST00000472490 MORC2Q9Y6X9 1032 aaPredicted RBP15.82■□□□□ 0.12
BRCA1-211ENST00000472490 EIF4BP23588 611 aaKnown RBP15.81■□□□□ 0.12
BRCA1-211ENST00000472490 WDR5P61964 334 aaKnown RBP15.81■□□□□ 0.12
BRCA1-211ENST00000472490 CEBPZQ03701 1054 aaKnown RBP15.81■□□□□ 0.12
BRCA1-211ENST00000472490 NFX1Q12986 1120 aaKnown RBP15.81■□□□□ 0.12
BRCA1-211ENST00000472490 SLC39A14Q15043 492 aa15.81■□□□□ 0.12
BRCA1-211ENST00000472490 RAB30Q15771 203 aa15.81■□□□□ 0.12
BRCA1-211ENST00000472490 FAM173BQ6P4H8 233 aa15.81■□□□□ 0.12
BRCA1-211ENST00000472490 ZNF579Q8NAF0 562 aaKnown RBP15.81■□□□□ 0.12
BRCA1-211ENST00000472490 MCPH1Q8NEM0 835 aa15.81■□□□□ 0.12
BRCA1-211ENST00000472490 RASSF8Q8NHQ8 419 aa15.81■□□□□ 0.12
BRCA1-211ENST00000472490 CALML4Q96GE6 196 aa15.81■□□□□ 0.12
BRCA1-211ENST00000472490 OSMRQ99650 979 aa15.81■□□□□ 0.12
BRCA1-211ENST00000472490 TANC1Q9C0D5 1861 aa15.81■□□□□ 0.12
BRCA1-211ENST00000472490 DDX19AQ9NUU7 478 aaKnown RBP15.81■□□□□ 0.12
BRCA1-211ENST00000472490 DAXXQ9UER7 740 aaPredicted RBP15.81■□□□□ 0.12
BRCA1-211ENST00000472490 CFAP45Q9UL16 551 aa15.81■□□□□ 0.12
BRCA1-211ENST00000472490 PADI3Q9ULW8 664 aa15.81■□□□□ 0.12
BRCA1-211ENST00000472490 ATP6V1DQ9Y5K8 247 aa15.81■□□□□ 0.12
BRCA1-211ENST00000472490 SRPRBQ9Y5M8 271 aaKnown RBP15.81■□□□□ 0.12
BRCA1-211ENST00000472490 PP2D1A8MPX8 630 aa15.8■□□□□ 0.12
BRCA1-211ENST00000472490 CDC25AP30304 524 aa15.8■□□□□ 0.12
BRCA1-211ENST00000472490 CD52P31358 61 aa15.8■□□□□ 0.12
BRCA1-211ENST00000472490 TXLNAP40222 546 aa15.8■□□□□ 0.12
BRCA1-211ENST00000472490 NASPP49321 788 aaPredicted RBP15.8■□□□□ 0.12
BRCA1-211ENST00000472490 FXR1P51114 621 aaKnown RBP eCLIP15.8■□□□□ 0.12
BRCA1-211ENST00000472490 MKRN4PQ13434 485 aaPredicted RBP15.8■□□□□ 0.12
BRCA1-211ENST00000472490 DRP2Q13474 957 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms