RNA–Protein interactions for RNA: ENST00000472442.2

SCAMP4-207, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-207ENST00000472442 TNFAIP1Q13829 316 aa14.46□□□□□ -0.09
SCAMP4-207ENST00000472442 EP400NLQ6ZTU2 488 aa14.46□□□□□ -0.09
SCAMP4-207ENST00000472442 LDHDQ86WU2 507 aa14.46□□□□□ -0.09
SCAMP4-207ENST00000472442 ATP6V1G3Q96LB4 118 aa14.46□□□□□ -0.09
SCAMP4-207ENST00000472442 WDR18Q9BV38 432 aa14.46□□□□□ -0.09
SCAMP4-207ENST00000472442 DEFB129Q9H1M3 183 aa14.46□□□□□ -0.09
SCAMP4-207ENST00000472442 VAV3Q9UKW4 847 aa14.46□□□□□ -0.09
SCAMP4-207ENST00000472442 ZNF536O15090 1300 aa14.46□□□□□ -0.09
SCAMP4-207ENST00000472442 MYH10P35580 1976 aa14.46□□□□□ -0.09
SCAMP4-207ENST00000472442 POTEFA5A3E0 1075 aa14.46□□□□□ -0.09
SCAMP4-207ENST00000472442 RASSF9O75901 435 aa14.46□□□□□ -0.09
SCAMP4-207ENST00000472442 PLA2G4BP0C869 781 aa14.46□□□□□ -0.09
SCAMP4-207ENST00000472442 POTEIP0CG38 1075 aa14.46□□□□□ -0.09
SCAMP4-207ENST00000472442 MAGEA1P43355 309 aa14.46□□□□□ -0.09
SCAMP4-207ENST00000472442 NEDD9Q14511 834 aa14.46□□□□□ -0.09
SCAMP4-207ENST00000472442 GLE1Q53GS7 698 aaKnown RBP14.46□□□□□ -0.09
SCAMP4-207ENST00000472442 POTEGQ6S5H5 508 aa14.46□□□□□ -0.09
SCAMP4-207ENST00000472442 POTEEQ6S8J3 1075 aa14.46□□□□□ -0.09
SCAMP4-207ENST00000472442 SLC30A10Q6XR72 485 aa14.46□□□□□ -0.09
SCAMP4-207ENST00000472442 RPAINQ86UA6 219 aa14.46□□□□□ -0.09
SCAMP4-207ENST00000472442 FAM114A1Q8IWE2 563 aa14.46□□□□□ -0.09
SCAMP4-207ENST00000472442 BANK1Q8NDB2 785 aa14.46□□□□□ -0.09
SCAMP4-207ENST00000472442 FAM20AQ96MK3 541 aa14.46□□□□□ -0.09
SCAMP4-207ENST00000472442 SLC40A1Q9NP59 571 aa14.46□□□□□ -0.09
SCAMP4-207ENST00000472442 PPANQ9NQ55 473 aaKnown RBP14.46□□□□□ -0.09
SCAMP4-207ENST00000472442 ZNF541Q9H0D2 1346 aa14.46□□□□□ -0.09
SCAMP4-207ENST00000472442 BICDL2A1A5D9 508 aa14.46□□□□□ -0.1
SCAMP4-207ENST00000472442 GCOM1H8Y6P7 765 aaPredicted RBP14.46□□□□□ -0.1
SCAMP4-207ENST00000472442 FAM107AO95990 144 aa14.46□□□□□ -0.1
SCAMP4-207ENST00000472442 POLR2MP0CAP2 368 aa14.46□□□□□ -0.1
SCAMP4-207ENST00000472442 PSMC6P62333 389 aa14.46□□□□□ -0.1
SCAMP4-207ENST00000472442 UBXN2AP68543 259 aa14.46□□□□□ -0.1
SCAMP4-207ENST00000472442 CFAP221Q4G0U5 840 aa14.46□□□□□ -0.1
SCAMP4-207ENST00000472442 NBPF12Q5TAG4 269 aaPredicted RBP14.46□□□□□ -0.1
SCAMP4-207ENST00000472442 KLHDC7AQ5VTJ3 777 aa14.46□□□□□ -0.1
SCAMP4-207ENST00000472442 MAATS1Q7Z4T9 603 aa14.46□□□□□ -0.1
SCAMP4-207ENST00000472442 AGBL1Q96MI9 1066 aa14.46□□□□□ -0.1
SCAMP4-207ENST00000472442 MCM8Q9UJA3 840 aa14.46□□□□□ -0.1
SCAMP4-207ENST00000472442 NPHP3-ACAD11A0A0J9YXS1 232 aa14.45□□□□□ -0.1
SCAMP4-207ENST00000472442 KIF1CO43896 1103 aaKnown RBP14.45□□□□□ -0.1
SCAMP4-207ENST00000472442 HNRNPH3P31942 346 aaKnown RBP14.45□□□□□ -0.1
SCAMP4-207ENST00000472442 PPP1R2P41236 205 aa14.45□□□□□ -0.1
SCAMP4-207ENST00000472442 TRAF1Q13077 416 aa14.45□□□□□ -0.1
SCAMP4-207ENST00000472442 LRRC41Q15345 812 aa14.45□□□□□ -0.1
SCAMP4-207ENST00000472442 TRADDQ15628 312 aa14.45□□□□□ -0.1
SCAMP4-207ENST00000472442 CEP85LQ5SZL2 805 aa14.45□□□□□ -0.1
SCAMP4-207ENST00000472442 FGFBP2Q9BYJ0 223 aa14.45□□□□□ -0.1
SCAMP4-207ENST00000472442 LRRC27Q9C0I9 530 aa14.45□□□□□ -0.1
SCAMP4-207ENST00000472442 LRRC53A6NM62 1247 aa14.45□□□□□ -0.1
SCAMP4-207ENST00000472442 SSBP05455 408 aaKnown RBP eCLIP14.45□□□□□ -0.1
SCAMP4-207ENST00000472442 CYP11B2P19099 503 aa14.45□□□□□ -0.1
SCAMP4-207ENST00000472442 ELF1P32519 619 aa14.45□□□□□ -0.1
SCAMP4-207ENST00000472442 SLC12A3P55017 1021 aa14.45□□□□□ -0.1
SCAMP4-207ENST00000472442 GFPT1Q06210 699 aaPredicted RBP14.45□□□□□ -0.1
SCAMP4-207ENST00000472442 COASYQ13057 564 aa14.45□□□□□ -0.1
SCAMP4-207ENST00000472442 ITGB3BPQ13352 177 aaPredicted RBP14.45□□□□□ -0.1
SCAMP4-207ENST00000472442 PREPLQ4J6C6 727 aaPredicted RBP14.45□□□□□ -0.1
SCAMP4-207ENST00000472442 ARSHQ5FYA8 562 aa14.45□□□□□ -0.1
SCAMP4-207ENST00000472442 EMC10Q5UCC4 262 aa14.45□□□□□ -0.1
SCAMP4-207ENST00000472442 GUF1Q8N442 669 aaKnown RBP14.45□□□□□ -0.1
SCAMP4-207ENST00000472442 CASKIN2Q8WXE0 1202 aa14.45□□□□□ -0.1
SCAMP4-207ENST00000472442 MRPL11Q9Y3B7 192 aaKnown RBP14.45□□□□□ -0.1
SCAMP4-207ENST00000472442 CTNND1O60716 968 aaKnown RBP14.44□□□□□ -0.1
SCAMP4-207ENST00000472442 LCA5LO95447 670 aa14.44□□□□□ -0.1
SCAMP4-207ENST00000472442 RPA1P27694 616 aa14.44□□□□□ -0.1
SCAMP4-207ENST00000472442 ZNF76P36508 570 aa14.44□□□□□ -0.1
SCAMP4-207ENST00000472442 CACNB1Q02641 598 aaPredicted RBP14.44□□□□□ -0.1
SCAMP4-207ENST00000472442 PLCB4Q15147 1175 aa14.44□□□□□ -0.1
SCAMP4-207ENST00000472442 RRAGAQ7L523 313 aa14.44□□□□□ -0.1
SCAMP4-207ENST00000472442 CD302Q8IX05 232 aa14.44□□□□□ -0.1
SCAMP4-207ENST00000472442 MREGQ8N565 214 aa14.44□□□□□ -0.1
SCAMP4-207ENST00000472442 CYFIP2Q96F07 1278 aa14.44□□□□□ -0.1
SCAMP4-207ENST00000472442 NOX5Q96PH1 765 aa14.44□□□□□ -0.1
SCAMP4-207ENST00000472442 KRT12Q99456 494 aa14.44□□□□□ -0.1
SCAMP4-207ENST00000472442 KIAA1683Q9H0B3 1180 aa14.44□□□□□ -0.1
SCAMP4-207ENST00000472442 MMRN2Q9H8L6 949 aa14.44□□□□□ -0.1
SCAMP4-207ENST00000472442 PCDHA2Q9Y5H9 948 aa14.44□□□□□ -0.1
SCAMP4-207ENST00000472442 HMGB1P1B2RPK0 211 aaPredicted RBP14.44□□□□□ -0.1
SCAMP4-207ENST00000472442 EML1O00423 815 aa14.44□□□□□ -0.1
SCAMP4-207ENST00000472442 MEIS1O00470 390 aa14.44□□□□□ -0.1
SCAMP4-207ENST00000472442 SLC26A4O43511 780 aa14.44□□□□□ -0.1
SCAMP4-207ENST00000472442 CDR1P51861 262 aa14.44□□□□□ -0.1
SCAMP4-207ENST00000472442 C6orf89Q6UWU4 347 aa14.44□□□□□ -0.1
SCAMP4-207ENST00000472442 N4BP2L2Q92802 583 aaPredicted RBP14.44□□□□□ -0.1
SCAMP4-207ENST00000472442 CCDC114Q96M63 670 aa14.44□□□□□ -0.1
SCAMP4-207ENST00000472442 PANK4Q9NVE7 773 aa14.44□□□□□ -0.1
SCAMP4-207ENST00000472442 PLAAQ9Y263 795 aa14.44□□□□□ -0.1
SCAMP4-207ENST00000472442 ICAM1P05362 532 aa14.43□□□□□ -0.1
SCAMP4-207ENST00000472442 SCP2P22307 547 aa14.43□□□□□ -0.1
SCAMP4-207ENST00000472442 NF2P35240 595 aa14.43□□□□□ -0.1
SCAMP4-207ENST00000472442 PSMD2Q13200 908 aa14.43□□□□□ -0.1
SCAMP4-207ENST00000472442 SPRED3Q2MJR0 410 aa14.43□□□□□ -0.1
SCAMP4-207ENST00000472442 CCDC121Q6ZUS5 278 aa14.43□□□□□ -0.1
SCAMP4-207ENST00000472442 GPBP1Q86WP2 473 aa14.43□□□□□ -0.1
SCAMP4-207ENST00000472442 TACO1Q9BSH4 297 aaKnown RBP14.43□□□□□ -0.1
SCAMP4-207ENST00000472442 SIK3Q9Y2K2 1263 aa14.43□□□□□ -0.1
SCAMP4-207ENST00000472442 ABCB11O95342 1321 aa14.43□□□□□ -0.1
SCAMP4-207ENST00000472442 SRCAPQ6ZRS2 3230 aa14.43□□□□□ -0.1
SCAMP4-207ENST00000472442 RNASE9P60153 205 aaKnown RBP14.43□□□□□ -0.1
SCAMP4-207ENST00000472442 PRAMEF18Q5VWM3 479 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms