RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 HBP1O60381 514 aa21.71■■□□□ 1.07
SORT1-203ENST00000471996 ATG7O95352 703 aa21.71■■□□□ 1.07
SORT1-203ENST00000471996 NPR3P17342 541 aa21.71■■□□□ 1.07
SORT1-203ENST00000471996 CRYBB1P53674 252 aaPredicted RBP21.71■■□□□ 1.07
SORT1-203ENST00000471996 ATAT1Q5SQI0 421 aa21.71■■□□□ 1.07
SORT1-203ENST00000471996 RARS2Q5T160 578 aaKnown RBP21.71■■□□□ 1.07
SORT1-203ENST00000471996 C12orf76Q8N812 135 aaPredicted RBP21.71■■□□□ 1.07
SORT1-203ENST00000471996 CTCFLQ8NI51 663 aaPredicted RBP21.71■■□□□ 1.07
SORT1-203ENST00000471996 MXRA8Q9BRK3 442 aa21.71■■□□□ 1.07
SORT1-203ENST00000471996 LZTS2Q9BRK4 669 aa21.71■■□□□ 1.07
SORT1-203ENST00000471996 DBR1Q9UK59 544 aaKnown RBP21.71■■□□□ 1.07
SORT1-203ENST00000471996 U3KPZ7 1027 aaPredicted RBP21.71■■□□□ 1.07
SORT1-203ENST00000471996 DNAH14Q0VDD8 3507 aa21.71■■□□□ 1.07
SORT1-203ENST00000471996 LOXHD1Q8IVV2 1947 aa21.7■■□□□ 1.07
SORT1-203ENST00000471996 MYO10Q9HD67 2058 aa21.7■■□□□ 1.06
SORT1-203ENST00000471996 MED19A0JLT2 244 aaPredicted RBP21.7■■□□□ 1.06
SORT1-203ENST00000471996 EOMESO95936 686 aa21.7■■□□□ 1.06
SORT1-203ENST00000471996 CYP21A2P08686 494 aa21.7■■□□□ 1.06
SORT1-203ENST00000471996 KIF5BP33176 963 aa21.7■■□□□ 1.06
SORT1-203ENST00000471996 KIZQ2M2Z5 673 aa21.7■■□□□ 1.06
SORT1-203ENST00000471996 RALYLQ86SE5 291 aaKnown RBP21.7■■□□□ 1.06
SORT1-203ENST00000471996 SLC39A11Q8N1S5 342 aa21.7■■□□□ 1.06
SORT1-203ENST00000471996 DTWD2Q8NBA8 298 aa21.7■■□□□ 1.06
SORT1-203ENST00000471996 IGDCC4Q8TDY8 1250 aa21.7■■□□□ 1.06
SORT1-203ENST00000471996 RMDN1Q96DB5 314 aa21.7■■□□□ 1.06
SORT1-203ENST00000471996 OSMRQ99650 979 aa21.7■■□□□ 1.06
SORT1-203ENST00000471996 CYP26B1Q9NR63 512 aa21.7■■□□□ 1.06
SORT1-203ENST00000471996 DZANK1Q9NVP4 752 aa21.7■■□□□ 1.06
SORT1-203ENST00000471996 IGKV6D-21A0A0A0MT36 114 aa21.69■■□□□ 1.06
SORT1-203ENST00000471996 ARP10275 920 aa21.69■■□□□ 1.06
SORT1-203ENST00000471996 B4GALNT3Q6L9W6 998 aa21.69■■□□□ 1.06
SORT1-203ENST00000471996 ABI1Q8IZP0 508 aa21.69■■□□□ 1.06
SORT1-203ENST00000471996 NCOA7Q8NI08 942 aa21.69■■□□□ 1.06
SORT1-203ENST00000471996 CYP2W1Q8TAV3 490 aa21.69■■□□□ 1.06
SORT1-203ENST00000471996 PPP1R16BQ96T49 567 aa21.69■■□□□ 1.06
SORT1-203ENST00000471996 RTP3Q9BQQ7 232 aa21.69■■□□□ 1.06
SORT1-203ENST00000471996 COL1A2P08123 1366 aa21.69■■□□□ 1.06
SORT1-203ENST00000471996 DDAH1O94760 285 aa21.68■■□□□ 1.06
SORT1-203ENST00000471996 CXCL14O95715 111 aa21.68■■□□□ 1.06
SORT1-203ENST00000471996 ITGB3BPQ13352 177 aaPredicted RBP21.68■■□□□ 1.06
SORT1-203ENST00000471996 BMS1Q14692 1282 aaKnown RBP21.68■■□□□ 1.06
SORT1-203ENST00000471996 ZNF484Q5JVG2 852 aa21.68■■□□□ 1.06
SORT1-203ENST00000471996 KANK3Q6NY19 840 aa21.68■■□□□ 1.06
SORT1-203ENST00000471996 DGLUCYQ7Z3D6 616 aa21.68■■□□□ 1.06
SORT1-203ENST00000471996 SMC5Q8IY18 1101 aa21.68■■□□□ 1.06
SORT1-203ENST00000471996 ZNF654Q8IZM8 581 aa21.68■■□□□ 1.06
SORT1-203ENST00000471996 SRBD1Q8N5C6 995 aaKnown RBP21.68■■□□□ 1.06
SORT1-203ENST00000471996 MYL10Q9BUA6 226 aa21.68■■□□□ 1.06
SORT1-203ENST00000471996 SEMA4AQ9H3S1 761 aa21.68■■□□□ 1.06
SORT1-203ENST00000471996 ZBTB42B2RXF5 422 aa21.67■■□□□ 1.06
SORT1-203ENST00000471996 GPR32O75388 356 aa21.67■■□□□ 1.06
SORT1-203ENST00000471996 PLEKHA8P1O95397 391 aa21.67■■□□□ 1.06
SORT1-203ENST00000471996 LMNAP02545 664 aaKnown RBP21.67■■□□□ 1.06
SORT1-203ENST00000471996 CA8P35219 290 aa21.67■■□□□ 1.06
SORT1-203ENST00000471996 GNAQP50148 359 aa21.67■■□□□ 1.06
SORT1-203ENST00000471996 ANTXR2P58335 489 aa21.67■■□□□ 1.06
SORT1-203ENST00000471996 TDGQ13569 410 aa21.67■■□□□ 1.06
SORT1-203ENST00000471996 CHD1LQ86WJ1 897 aa21.67■■□□□ 1.06
SORT1-203ENST00000471996 KCNG4Q8TDN1 519 aa21.67■■□□□ 1.06
SORT1-203ENST00000471996 AGO4Q9HCK5 861 aaKnown RBP21.67■■□□□ 1.06
SORT1-203ENST00000471996 TAF6LQ9Y6J9 622 aa21.67■■□□□ 1.06
SORT1-203ENST00000471996 E7EWF7 191 aa21.66■■□□□ 1.06
SORT1-203ENST00000471996 BACH1O14867 736 aa21.66■■□□□ 1.06
SORT1-203ENST00000471996 CLLU1OSQ5K130 101 aa21.66■■□□□ 1.06
SORT1-203ENST00000471996 FAM160B1Q5W0V3 765 aa21.66■■□□□ 1.06
SORT1-203ENST00000471996 DIEXFQ68CQ4 756 aaKnown RBP21.66■■□□□ 1.06
SORT1-203ENST00000471996 ABHD15Q6UXT9 468 aa21.66■■□□□ 1.06
SORT1-203ENST00000471996 ECHDC2Q86YB7 292 aa21.66■■□□□ 1.06
SORT1-203ENST00000471996 ACSF2Q96CM8 615 aaPredicted RBP21.66■■□□□ 1.06
SORT1-203ENST00000471996 C22orf31O95567 290 aa21.65■■□□□ 1.06
SORT1-203ENST00000471996 CCNE2O96020 404 aa21.65■■□□□ 1.06
SORT1-203ENST00000471996 VTNP04004 478 aa21.65■■□□□ 1.06
SORT1-203ENST00000471996 EPCAMP16422 314 aa21.65■■□□□ 1.06
SORT1-203ENST00000471996 ZSCAN20P17040 1043 aaPredicted RBP21.65■■□□□ 1.06
SORT1-203ENST00000471996 CEP55Q53EZ4 464 aa21.65■■□□□ 1.06
SORT1-203ENST00000471996 CMTR1Q8N1G2 835 aaKnown RBP21.65■■□□□ 1.06
SORT1-203ENST00000471996 TMEM87AQ8NBN3 555 aa21.65■■□□□ 1.06
SORT1-203ENST00000471996 LY9Q9HBG7 655 aa21.65■■□□□ 1.06
SORT1-203ENST00000471996 FBXL21Q9UKT6 434 aa21.65■■□□□ 1.06
SORT1-203ENST00000471996 DUSP12Q9UNI6 340 aa21.65■■□□□ 1.06
SORT1-203ENST00000471996 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.64■■□□□ 1.05
SORT1-203ENST00000471996 ALDH7A1P49419 539 aaKnown RBP21.64■■□□□ 1.05
SORT1-203ENST00000471996 PDXDC2PQ6P474 469 aa21.64■■□□□ 1.05
SORT1-203ENST00000471996 OTOP3Q7RTS5 596 aa21.64■■□□□ 1.05
SORT1-203ENST00000471996 CCDC60Q8IWA6 550 aaPredicted RBP21.64■■□□□ 1.05
SORT1-203ENST00000471996 SIX5Q8N196 739 aa21.64■■□□□ 1.05
SORT1-203ENST00000471996 SLC22A17Q8WUG5 538 aa21.64■■□□□ 1.05
SORT1-203ENST00000471996 TMEM169Q96HH4 297 aa21.64■■□□□ 1.05
SORT1-203ENST00000471996 ZBP1Q9H171 429 aa21.64■■□□□ 1.05
SORT1-203ENST00000471996 ZNF302Q9NR11 478 aa21.64■■□□□ 1.05
SORT1-203ENST00000471996 IRAK3Q9Y616 596 aa21.64■■□□□ 1.05
SORT1-203ENST00000471996 ZNF292O60281 2723 aa21.63■■□□□ 1.05
SORT1-203ENST00000471996 NT5C1B-RDH14C9J2C7 533 aa21.63■■□□□ 1.05
SORT1-203ENST00000471996 ATP4AP20648 1035 aa21.63■■□□□ 1.05
SORT1-203ENST00000471996 METAP2P50579 478 aaKnown RBP eCLIP21.63■■□□□ 1.05
SORT1-203ENST00000471996 BCAR1P56945 870 aa21.63■■□□□ 1.05
SORT1-203ENST00000471996 NUCB1Q02818 461 aa21.63■■□□□ 1.05
SORT1-203ENST00000471996 PTH1RQ03431 593 aa21.63■■□□□ 1.05
SORT1-203ENST00000471996 PUM1Q14671 1186 aaKnown RBP eCLIP21.63■■□□□ 1.05
SORT1-203ENST00000471996 TMC5Q6UXY8 1006 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms