RNA–Protein interactions for RNA: ENST00000470942.1

HDAC6-218, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-218ENST00000470942 STBD1O95210 358 aa17.61■□□□□ 0.41
HDAC6-218ENST00000470942 TXKP42681 527 aa17.61■□□□□ 0.41
HDAC6-218ENST00000470942 CRYBB1P53674 252 aaPredicted RBP17.61■□□□□ 0.41
HDAC6-218ENST00000470942 NLRP11P59045 1033 aaKnown RBP17.61■□□□□ 0.41
HDAC6-218ENST00000470942 TARBP2Q15633 366 aaKnown RBP17.61■□□□□ 0.41
HDAC6-218ENST00000470942 CCDC85BQ15834 202 aaPredicted RBP17.61■□□□□ 0.41
HDAC6-218ENST00000470942 ODR4Q5SWX8 454 aa17.61■□□□□ 0.41
HDAC6-218ENST00000470942 MICALL1Q8N3F8 863 aa17.61■□□□□ 0.41
HDAC6-218ENST00000470942 LINC01465Q8N7H1 131 aa17.61■□□□□ 0.41
HDAC6-218ENST00000470942 TMX3Q96JJ7 454 aa17.61■□□□□ 0.41
HDAC6-218ENST00000470942 TGS1Q96RS0 853 aaKnown RBP17.61■□□□□ 0.41
HDAC6-218ENST00000470942 FOXP1Q9H334 677 aaPredicted RBP17.61■□□□□ 0.41
HDAC6-218ENST00000470942 PCDHA12Q9UN75 941 aa17.61■□□□□ 0.41
HDAC6-218ENST00000470942 GTPBP6O43824 516 aaPredicted RBP17.6■□□□□ 0.41
HDAC6-218ENST00000470942 GPR32O75388 356 aa17.6■□□□□ 0.41
HDAC6-218ENST00000470942 CD2BP2O95400 341 aaKnown RBP17.6■□□□□ 0.41
HDAC6-218ENST00000470942 IBSPP21815 317 aaPredicted RBP17.6■□□□□ 0.41
HDAC6-218ENST00000470942 MCM7P33993 719 aa17.6■□□□□ 0.41
HDAC6-218ENST00000470942 ERVK-21P61565 698 aa17.6■□□□□ 0.41
HDAC6-218ENST00000470942 PLA2G4FQ68DD2 849 aa17.6■□□□□ 0.41
HDAC6-218ENST00000470942 ANO5Q75V66 913 aa17.6■□□□□ 0.41
HDAC6-218ENST00000470942 RTN4RL1Q86UN2 441 aaPredicted RBP17.6■□□□□ 0.41
HDAC6-218ENST00000470942 TMEM40Q8WWA1 233 aa17.6■□□□□ 0.41
HDAC6-218ENST00000470942 LINC01599Q8WXQ3 324 aa17.6■□□□□ 0.41
HDAC6-218ENST00000470942 DYDC2Q96IM9 177 aa17.6■□□□□ 0.41
HDAC6-218ENST00000470942 ZNF668Q96K58 619 aaPredicted RBP17.6■□□□□ 0.41
HDAC6-218ENST00000470942 SCLT1Q96NL6 688 aa17.6■□□□□ 0.41
HDAC6-218ENST00000470942 TTC12Q9H892 705 aaPredicted RBP17.6■□□□□ 0.41
HDAC6-218ENST00000470942 RGL1Q9NZL6 768 aa17.6■□□□□ 0.41
HDAC6-218ENST00000470942 ST3GAL5Q9UNP4 418 aa17.6■□□□□ 0.41
HDAC6-218ENST00000470942 KIF3AQ9Y496 699 aa17.6■□□□□ 0.41
HDAC6-218ENST00000470942 NLRC5Q86WI3 1866 aa17.6■□□□□ 0.41
HDAC6-218ENST00000470942 GPR182O15218 404 aa17.59■□□□□ 0.41
HDAC6-218ENST00000470942 MCM2P49736 904 aa17.59■□□□□ 0.41
HDAC6-218ENST00000470942 DNM2P50570 870 aa17.59■□□□□ 0.41
HDAC6-218ENST00000470942 CYP4A11Q02928 519 aa17.59■□□□□ 0.41
HDAC6-218ENST00000470942 SPIRE1Q08AE8 756 aa17.59■□□□□ 0.41
HDAC6-218ENST00000470942 CTTNQ14247 550 aaKnown RBP17.59■□□□□ 0.41
HDAC6-218ENST00000470942 ZNF174Q15697 407 aa17.59■□□□□ 0.41
HDAC6-218ENST00000470942 SP7Q8TDD2 431 aaPredicted RBP17.59■□□□□ 0.41
HDAC6-218ENST00000470942 LXNQ9BS40 222 aa17.59■□□□□ 0.41
HDAC6-218ENST00000470942 TMX1Q9H3N1 280 aa17.59■□□□□ 0.41
HDAC6-218ENST00000470942 ERVK-5Q9HDB9 667 aa17.59■□□□□ 0.41
HDAC6-218ENST00000470942 COL4A4P53420 1690 aaPredicted RBP17.58■□□□□ 0.41
HDAC6-218ENST00000470942 DENND3A2RUS2 1198 aa17.58■□□□□ 0.4
HDAC6-218ENST00000470942 MAFO75444 373 aaPredicted RBP17.58■□□□□ 0.4
HDAC6-218ENST00000470942 NPEPPSP55786 919 aa17.58■□□□□ 0.4
HDAC6-218ENST00000470942 GRB10Q13322 594 aa17.58■□□□□ 0.4
HDAC6-218ENST00000470942 NOSTRINQ8IVI9 506 aa17.58■□□□□ 0.4
HDAC6-218ENST00000470942 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.58■□□□□ 0.4
HDAC6-218ENST00000470942 TPH2Q8IWU9 490 aa17.58■□□□□ 0.4
HDAC6-218ENST00000470942 ZNF710Q8N1W2 664 aa17.58■□□□□ 0.4
HDAC6-218ENST00000470942 FIBCD1Q8N539 461 aa17.58■□□□□ 0.4
HDAC6-218ENST00000470942 NLRP7Q8WX94 980 aa17.58■□□□□ 0.4
HDAC6-218ENST00000470942 CEP170P1Q96L14 293 aa17.58■□□□□ 0.4
HDAC6-218ENST00000470942 MTMR9Q96QG7 549 aa17.58■□□□□ 0.4
HDAC6-218ENST00000470942 CEP89Q96ST8 783 aa17.58■□□□□ 0.4
HDAC6-218ENST00000470942 EIF2AK1Q9BQI3 630 aaKnown RBP17.58■□□□□ 0.4
HDAC6-218ENST00000470942 JPH2Q9BR39 696 aaPredicted RBP17.58■□□□□ 0.4
HDAC6-218ENST00000470942 C17orf80Q9BSJ5 609 aa17.58■□□□□ 0.4
HDAC6-218ENST00000470942 TSPYL2Q9H2G4 693 aaPredicted RBP17.58■□□□□ 0.4
HDAC6-218ENST00000470942 TMEM60Q9H2L4 133 aa17.58■□□□□ 0.4
HDAC6-218ENST00000470942 ADAMTS10Q9H324 1103 aa17.58■□□□□ 0.4
HDAC6-218ENST00000470942 ZSWIM4Q9H7M6 989 aa17.58■□□□□ 0.4
HDAC6-218ENST00000470942 CYP26B1Q9NR63 512 aa17.58■□□□□ 0.4
HDAC6-218ENST00000470942 WRAP73Q9P2S5 460 aaPredicted RBP17.58■□□□□ 0.4
HDAC6-218ENST00000470942 LRFN2Q9ULH4 789 aa17.58■□□□□ 0.4
HDAC6-218ENST00000470942 NOL7Q9UMY1 257 aaKnown RBP17.58■□□□□ 0.4
HDAC6-218ENST00000470942 STAG3L1P0CL83 205 aa17.57■□□□□ 0.4
HDAC6-218ENST00000470942 GPC3P51654 580 aa17.57■□□□□ 0.4
HDAC6-218ENST00000470942 DRP2Q13474 957 aa17.57■□□□□ 0.4
HDAC6-218ENST00000470942 TTC38Q5R3I4 469 aa17.57■□□□□ 0.4
HDAC6-218ENST00000470942 OTUD6AQ7L8S5 288 aa17.57■□□□□ 0.4
HDAC6-218ENST00000470942 FAM228AQ86W67 206 aa17.57■□□□□ 0.4
HDAC6-218ENST00000470942 C4orf19Q8IY42 314 aa17.57■□□□□ 0.4
HDAC6-218ENST00000470942 FBXO22Q8NEZ5 403 aa17.57■□□□□ 0.4
HDAC6-218ENST00000470942 GDPD5Q8WTR4 605 aa17.57■□□□□ 0.4
HDAC6-218ENST00000470942 ADAM2Q99965 735 aa17.57■□□□□ 0.4
HDAC6-218ENST00000470942 BACH2Q9BYV9 841 aa17.57■□□□□ 0.4
HDAC6-218ENST00000470942 SUCLA2Q9P2R7 463 aaPredicted RBP17.57■□□□□ 0.4
HDAC6-218ENST00000470942 MTCH2Q9Y6C9 303 aa17.57■□□□□ 0.4
HDAC6-218ENST00000470942 PRRC2BQ5JSZ5 2229 aaKnown RBP17.57■□□□□ 0.4
HDAC6-218ENST00000470942 EYSQ5T1H1 3165 aa17.57■□□□□ 0.4
HDAC6-218ENST00000470942 ARID2Q68CP9 1835 aa17.56■□□□□ 0.4
HDAC6-218ENST00000470942 IGKV6-21A0A0C4DH24 114 aa17.56■□□□□ 0.4
HDAC6-218ENST00000470942 MGEA5O60502 916 aa17.56■□□□□ 0.4
HDAC6-218ENST00000470942 SLITRK3O94933 977 aa17.56■□□□□ 0.4
HDAC6-218ENST00000470942 EIF4BP23588 611 aaKnown RBP17.56■□□□□ 0.4
HDAC6-218ENST00000470942 GJB2P29033 226 aa17.56■□□□□ 0.4
HDAC6-218ENST00000470942 YWHABP31946 246 aaKnown RBP17.56■□□□□ 0.4
HDAC6-218ENST00000470942 POLGP54098 1239 aaPredicted RBP17.56■□□□□ 0.4
HDAC6-218ENST00000470942 CDC42EP1Q00587 391 aa17.56■□□□□ 0.4
HDAC6-218ENST00000470942 BTG3Q14201 252 aaPredicted RBP17.56■□□□□ 0.4
HDAC6-218ENST00000470942 XKR9Q5GH70 373 aa17.56■□□□□ 0.4
HDAC6-218ENST00000470942 MCTP1Q6DN14 999 aa17.56■□□□□ 0.4
HDAC6-218ENST00000470942 FAM43BQ6ZT52 329 aaPredicted RBP17.56■□□□□ 0.4
HDAC6-218ENST00000470942 RHPN2Q8IUC4 686 aa17.56■□□□□ 0.4
HDAC6-218ENST00000470942 NPAS4Q8IUM7 802 aa17.56■□□□□ 0.4
HDAC6-218ENST00000470942 EXOC8Q8IYI6 725 aa17.56■□□□□ 0.4
HDAC6-218ENST00000470942 ZNF579Q8NAF0 562 aaKnown RBP17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms