RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 B4GALT3O60512 393 aa5.85□□□□□ -1.47
COL9A1-206ENST00000470652 MPIG6BO95866 241 aa5.85□□□□□ -1.47
COL9A1-206ENST00000470652 IL13RA1P78552 427 aa5.85□□□□□ -1.47
COL9A1-206ENST00000470652 GIMAP6Q6P9H5 292 aa5.85□□□□□ -1.47
COL9A1-206ENST00000470652 E2F7Q96AV8 911 aa5.85□□□□□ -1.47
COL9A1-206ENST00000470652 OR10A5Q9H207 317 aa5.85□□□□□ -1.47
COL9A1-206ENST00000470652 IFT57Q9NWB7 429 aa5.85□□□□□ -1.47
COL9A1-206ENST00000470652 EEA1Q15075 1411 aa5.84□□□□□ -1.47
COL9A1-206ENST00000470652 DVL2O14641 736 aa5.84□□□□□ -1.47
COL9A1-206ENST00000470652 KPNA6O60684 536 aa5.84□□□□□ -1.47
COL9A1-206ENST00000470652 GAS7O60861 476 aa5.84□□□□□ -1.47
COL9A1-206ENST00000470652 F2P00734 622 aa5.84□□□□□ -1.47
COL9A1-206ENST00000470652 PLATP00750 562 aa5.84□□□□□ -1.47
COL9A1-206ENST00000470652 HSD3B2P26439 372 aa5.84□□□□□ -1.47
COL9A1-206ENST00000470652 TOP3AQ13472 1001 aaPredicted RBP5.84□□□□□ -1.47
COL9A1-206ENST00000470652 NME9Q86XW9 330 aa5.84□□□□□ -1.47
COL9A1-206ENST00000470652 IFNL2Q8IZJ0 200 aa5.84□□□□□ -1.47
COL9A1-206ENST00000470652 KIAA1958Q8N8K9 716 aa5.84□□□□□ -1.47
COL9A1-206ENST00000470652 ERCC4Q92889 916 aaPredicted RBP5.84□□□□□ -1.47
COL9A1-206ENST00000470652 TARS2Q9BW92 718 aaKnown RBP5.84□□□□□ -1.47
COL9A1-206ENST00000470652 CARD11Q9BXL7 1154 aa5.84□□□□□ -1.47
COL9A1-206ENST00000470652 MTFR1LQ9H019 292 aa5.84□□□□□ -1.47
COL9A1-206ENST00000470652 CLASP1Q7Z460 1538 aa5.84□□□□□ -1.48
COL9A1-206ENST00000470652 GOLGA3Q08378 1498 aa5.83□□□□□ -1.48
COL9A1-206ENST00000470652 FAM83GA6ND36 823 aa5.83□□□□□ -1.48
COL9A1-206ENST00000470652 LAMTOR5O43504 91 aa5.83□□□□□ -1.48
COL9A1-206ENST00000470652 B4GALT4O60513 344 aa5.83□□□□□ -1.48
COL9A1-206ENST00000470652 CSF2RBP32927 897 aa5.83□□□□□ -1.48
COL9A1-206ENST00000470652 PPP2CBP62714 309 aa5.83□□□□□ -1.48
COL9A1-206ENST00000470652 PPP2CAP67775 309 aa5.83□□□□□ -1.48
COL9A1-206ENST00000470652 ZNF827Q17R98 1081 aa5.83□□□□□ -1.48
COL9A1-206ENST00000470652 TBC1D10BQ4KMP7 808 aaPredicted RBP5.83□□□□□ -1.48
COL9A1-206ENST00000470652 KANK2Q63ZY3 851 aa5.83□□□□□ -1.48
COL9A1-206ENST00000470652 SDE2Q6IQ49 451 aa5.83□□□□□ -1.48
COL9A1-206ENST00000470652 LRSAM1Q6UWE0 723 aa5.83□□□□□ -1.48
COL9A1-206ENST00000470652 ARHGEF18Q6ZSZ5 1173 aa5.83□□□□□ -1.48
COL9A1-206ENST00000470652 RALYLQ86SE5 291 aaKnown RBP5.83□□□□□ -1.48
COL9A1-206ENST00000470652 RTN4RL1Q86UN2 441 aaPredicted RBP5.83□□□□□ -1.48
COL9A1-206ENST00000470652 FOXRED1Q96CU9 486 aaPredicted RBP5.83□□□□□ -1.48
COL9A1-206ENST00000470652 FOXB1Q99853 325 aa5.83□□□□□ -1.48
COL9A1-206ENST00000470652 CNOT11Q9UKZ1 510 aaKnown RBP5.83□□□□□ -1.48
COL9A1-206ENST00000470652 SPO11Q9Y5K1 396 aa5.83□□□□□ -1.48
COL9A1-206ENST00000470652 NUP160Q12769 1436 aa5.82□□□□□ -1.48
COL9A1-206ENST00000470652 ZNF536O15090 1300 aa5.82□□□□□ -1.48
COL9A1-206ENST00000470652 TTBK1Q5TCY1 1321 aaPredicted RBP5.82□□□□□ -1.48
COL9A1-206ENST00000470652 ATP2A2P16615 1042 aaKnown RBP5.82□□□□□ -1.48
COL9A1-206ENST00000470652 APEX1P27695 318 aaKnown RBP5.82□□□□□ -1.48
COL9A1-206ENST00000470652 SCNN1BP51168 640 aa5.82□□□□□ -1.48
COL9A1-206ENST00000470652 GYS2P54840 703 aa5.82□□□□□ -1.48
COL9A1-206ENST00000470652 CD83Q01151 205 aa5.82□□□□□ -1.48
COL9A1-206ENST00000470652 ALDH6A1Q02252 535 aaKnown RBP5.82□□□□□ -1.48
COL9A1-206ENST00000470652 USP10Q14694 798 aaKnown RBP5.82□□□□□ -1.48
COL9A1-206ENST00000470652 SART3Q15020 963 aaKnown RBP5.82□□□□□ -1.48
COL9A1-206ENST00000470652 EIF4HQ15056 248 aaKnown RBP5.82□□□□□ -1.48
COL9A1-206ENST00000470652 OTOP2Q7RTS6 562 aa5.82□□□□□ -1.48
COL9A1-206ENST00000470652 SCYL1Q96KG9 808 aa5.82□□□□□ -1.48
COL9A1-206ENST00000470652 ZDHHC5Q9C0B5 715 aa5.82□□□□□ -1.48
COL9A1-206ENST00000470652 SLKQ9H2G2 1235 aaPredicted RBP5.82□□□□□ -1.48
COL9A1-206ENST00000470652 OXSMQ9NWU1 459 aa5.82□□□□□ -1.48
COL9A1-206ENST00000470652 IQGAP2Q13576 1575 aa5.81□□□□□ -1.48
COL9A1-206ENST00000470652 A0A0G2JNJ9 132 aa5.81□□□□□ -1.48
COL9A1-206ENST00000470652 MAFO75444 373 aaPredicted RBP5.81□□□□□ -1.48
COL9A1-206ENST00000470652 CLSTN1O94985 981 aa5.81□□□□□ -1.48
COL9A1-206ENST00000470652 ITGB3P05106 788 aa5.81□□□□□ -1.48
COL9A1-206ENST00000470652 SLC9A1P19634 815 aa5.81□□□□□ -1.48
COL9A1-206ENST00000470652 ADCY8P40145 1251 aa5.81□□□□□ -1.48
COL9A1-206ENST00000470652 ETV4P43268 484 aa5.81□□□□□ -1.48
COL9A1-206ENST00000470652 DSG1Q02413 1049 aa5.81□□□□□ -1.48
COL9A1-206ENST00000470652 ROM1Q03395 351 aa5.81□□□□□ -1.48
COL9A1-206ENST00000470652 ADCY1Q08828 1119 aa5.81□□□□□ -1.48
COL9A1-206ENST00000470652 MAP3K12Q12852 859 aa5.81□□□□□ -1.48
COL9A1-206ENST00000470652 MOGSQ13724 837 aa5.81□□□□□ -1.48
COL9A1-206ENST00000470652 PCBP1Q15365 356 aaKnown RBP eCLIP5.81□□□□□ -1.48
COL9A1-206ENST00000470652 EPHA7Q15375 998 aa5.81□□□□□ -1.48
COL9A1-206ENST00000470652 ZNF568Q3ZCX4 644 aa5.81□□□□□ -1.48
COL9A1-206ENST00000470652 TTC38Q5R3I4 469 aa5.81□□□□□ -1.48
COL9A1-206ENST00000470652 GRAMD4Q6IC98 578 aa5.81□□□□□ -1.48
COL9A1-206ENST00000470652 ZZZ3Q8IYH5 903 aa5.81□□□□□ -1.48
COL9A1-206ENST00000470652 NXPE1Q8N323 547 aa5.81□□□□□ -1.48
COL9A1-206ENST00000470652 EFHBQ8N7U6 833 aa5.81□□□□□ -1.48
COL9A1-206ENST00000470652 C16orf92Q96LL3 132 aa5.81□□□□□ -1.48
COL9A1-206ENST00000470652 ELF4Q99607 663 aaPredicted RBP5.81□□□□□ -1.48
COL9A1-206ENST00000470652 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.81□□□□□ -1.48
COL9A1-206ENST00000470652 JADE2Q9NQC1 790 aa5.81□□□□□ -1.48
COL9A1-206ENST00000470652 Q9UFV3 132 aa5.81□□□□□ -1.48
COL9A1-206ENST00000470652 A0A087X0B3 334 aa5.8□□□□□ -1.48
COL9A1-206ENST00000470652 UBA6A0AVT1 1052 aaPredicted RBP5.8□□□□□ -1.48
COL9A1-206ENST00000470652 GSG1L2A8MUP6 293 aa5.8□□□□□ -1.48
COL9A1-206ENST00000470652 AKAP8O43823 692 aaKnown RBP5.8□□□□□ -1.48
COL9A1-206ENST00000470652 PRLP01236 227 aa5.8□□□□□ -1.48
COL9A1-206ENST00000470652 HMGCRP04035 888 aa5.8□□□□□ -1.48
COL9A1-206ENST00000470652 MYCLP1P12525 358 aaPredicted RBP5.8□□□□□ -1.48
COL9A1-206ENST00000470652 PTX3P26022 381 aaPredicted RBP5.8□□□□□ -1.48
COL9A1-206ENST00000470652 MAGEA10P43363 369 aaPredicted RBP5.8□□□□□ -1.48
COL9A1-206ENST00000470652 KCNQ1P51787 676 aa5.8□□□□□ -1.48
COL9A1-206ENST00000470652 EPHB4P54760 987 aa5.8□□□□□ -1.48
COL9A1-206ENST00000470652 OCRLQ01968 901 aa5.8□□□□□ -1.48
COL9A1-206ENST00000470652 ZMAT1Q5H9K5 638 aa5.8□□□□□ -1.48
COL9A1-206ENST00000470652 CREB3L3Q68CJ9 461 aa5.8□□□□□ -1.48
COL9A1-206ENST00000470652 TMEM200BQ69YZ2 307 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms