RNA–Protein interactions for RNA: ENST00000470600.1

TGFBR3-206, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 2

Gene TGFBR3, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-206ENST00000470600 PDIA4P13667 645 aaKnown RBP9.69□□□□□ -0.86
TGFBR3-206ENST00000470600 ARL2P36404 184 aa9.69□□□□□ -0.86
TGFBR3-206ENST00000470600 LONP1P36776 959 aaKnown RBP9.69□□□□□ -0.86
TGFBR3-206ENST00000470600 CCL23P55773 120 aa9.69□□□□□ -0.86
TGFBR3-206ENST00000470600 IGBP1P78318 339 aa9.69□□□□□ -0.86
TGFBR3-206ENST00000470600 BECN1Q14457 450 aa9.69□□□□□ -0.86
TGFBR3-206ENST00000470600 LPIN1Q14693 890 aa9.69□□□□□ -0.86
TGFBR3-206ENST00000470600 KARSQ15046 597 aaKnown RBP9.69□□□□□ -0.86
TGFBR3-206ENST00000470600 AMHR2Q16671 573 aa9.69□□□□□ -0.86
TGFBR3-206ENST00000470600 MTERF2Q49AM1 385 aa9.69□□□□□ -0.86
TGFBR3-206ENST00000470600 PLEKHG4Q58EX7 1191 aa9.69□□□□□ -0.86
TGFBR3-206ENST00000470600 FAM47CQ5HY64 1035 aa9.69□□□□□ -0.86
TGFBR3-206ENST00000470600 FBXO47Q5MNV8 452 aa9.69□□□□□ -0.86
TGFBR3-206ENST00000470600 PRPF38BQ5VTL8 546 aaKnown RBP9.69□□□□□ -0.86
TGFBR3-206ENST00000470600 DTHD1Q6ZMT9 781 aa9.69□□□□□ -0.86
TGFBR3-206ENST00000470600 C1orf186Q6ZWK4 172 aa9.69□□□□□ -0.86
TGFBR3-206ENST00000470600 LRRC8DQ7L1W4 858 aa9.69□□□□□ -0.86
TGFBR3-206ENST00000470600 IFNLR1Q8IU57 520 aaPredicted RBP9.69□□□□□ -0.86
TGFBR3-206ENST00000470600 ASAP3Q8TDY4 903 aa9.69□□□□□ -0.86
TGFBR3-206ENST00000470600 SNX29Q8TEQ0 813 aa9.69□□□□□ -0.86
TGFBR3-206ENST00000470600 DNAJB3Q8WWF6 145 aa9.69□□□□□ -0.86
TGFBR3-206ENST00000470600 SYMPKQ92797 1274 aaKnown RBP9.69□□□□□ -0.86
TGFBR3-206ENST00000470600 KCNN1Q92952 543 aa9.69□□□□□ -0.86
TGFBR3-206ENST00000470600 AK8Q96MA6 479 aa9.69□□□□□ -0.86
TGFBR3-206ENST00000470600 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.69□□□□□ -0.861e-28■□□□□ 9.8
TGFBR3-206ENST00000470600 RUSC1Q9BVN2 902 aa9.69□□□□□ -0.86
TGFBR3-206ENST00000470600 TMX1Q9H3N1 280 aa9.69□□□□□ -0.86
TGFBR3-206ENST00000470600 AZI2Q9H6S1 392 aa9.69□□□□□ -0.86
TGFBR3-206ENST00000470600 MINDY3Q9H8M7 445 aa9.69□□□□□ -0.86
TGFBR3-206ENST00000470600 RC3H2Q9HBD1 1191 aaKnown RBP9.69□□□□□ -0.86
TGFBR3-206ENST00000470600 IFT122Q9HBG6 1241 aa9.69□□□□□ -0.86
TGFBR3-206ENST00000470600 TMEM39AQ9NV64 488 aa9.69□□□□□ -0.86
TGFBR3-206ENST00000470600 CXXC1Q9P0U4 656 aaPredicted RBP9.69□□□□□ -0.86
TGFBR3-206ENST00000470600 SEPT9Q9UHD8 586 aaPredicted RBP9.69□□□□□ -0.86
TGFBR3-206ENST00000470600 CIZ1Q9ULV3 898 aaPredicted RBP9.69□□□□□ -0.86
TGFBR3-206ENST00000470600 PCDHA7Q9UN72 937 aa9.69□□□□□ -0.86
TGFBR3-206ENST00000470600 TRPC6Q9Y210 931 aa9.69□□□□□ -0.86
TGFBR3-206ENST00000470600 FNDC1Q4ZHG4 1894 aaPredicted RBP9.68□□□□□ -0.86
TGFBR3-206ENST00000470600 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.68□□□□□ -0.86
TGFBR3-206ENST00000470600 SPTLC2O15270 562 aa9.68□□□□□ -0.86
TGFBR3-206ENST00000470600 SLC26A4O43511 780 aa9.68□□□□□ -0.86
TGFBR3-206ENST00000470600 EYA4O95677 639 aa9.68□□□□□ -0.86
TGFBR3-206ENST00000470600 BMP15O95972 392 aa9.68□□□□□ -0.86
TGFBR3-206ENST00000470600 LINC00271P0C7V0 271 aa9.68□□□□□ -0.86
TGFBR3-206ENST00000470600 XRCC6P12956 609 aaKnown RBP eCLIP9.68□□□□□ -0.86
TGFBR3-206ENST00000470600 SELPP16109 830 aa9.68□□□□□ -0.86
TGFBR3-206ENST00000470600 PLCG1P19174 1290 aa9.68□□□□□ -0.86
TGFBR3-206ENST00000470600 GPC3P51654 580 aa9.68□□□□□ -0.86
TGFBR3-206ENST00000470600 MDM2Q00987 491 aaPredicted RBP9.68□□□□□ -0.86
TGFBR3-206ENST00000470600 CEBPZQ03701 1054 aaKnown RBP9.68□□□□□ -0.86
TGFBR3-206ENST00000470600 GNL2Q13823 731 aaKnown RBP9.68□□□□□ -0.86
TGFBR3-206ENST00000470600 DSC3Q14574 896 aa9.68□□□□□ -0.86
TGFBR3-206ENST00000470600 FOXD4L6Q3SYB3 417 aaPredicted RBP9.68□□□□□ -0.86
TGFBR3-206ENST00000470600 ATL3Q6DD88 541 aa9.68□□□□□ -0.86
TGFBR3-206ENST00000470600 FAM109BQ6ICB4 259 aaPredicted RBP9.68□□□□□ -0.86
TGFBR3-206ENST00000470600 TAF2Q6P1X5 1199 aa9.68□□□□□ -0.86
TGFBR3-206ENST00000470600 FOXD4L3Q6VB84 417 aaPredicted RBP9.68□□□□□ -0.86
TGFBR3-206ENST00000470600 CLEC17AQ6ZS10 378 aa9.68□□□□□ -0.86
TGFBR3-206ENST00000470600 TAS1R3Q7RTX0 852 aa9.68□□□□□ -0.86
TGFBR3-206ENST00000470600 RTN4RL1Q86UN2 441 aaPredicted RBP9.68□□□□□ -0.86
TGFBR3-206ENST00000470600 DPF3Q92784 378 aa9.68□□□□□ -0.86
TGFBR3-206ENST00000470600 GOLPH3LQ9H4A5 285 aa9.68□□□□□ -0.86
TGFBR3-206ENST00000470600 GPRC5CQ9NQ84 441 aa9.68□□□□□ -0.86
TGFBR3-206ENST00000470600 DDX19AQ9NUU7 478 aaKnown RBP9.68□□□□□ -0.86
TGFBR3-206ENST00000470600 SAMM50Q9Y512 469 aa9.68□□□□□ -0.86
TGFBR3-206ENST00000470600 PPME1Q9Y570 386 aa9.68□□□□□ -0.86
TGFBR3-206ENST00000470600 CDY2AQ9Y6F7 541 aa9.68□□□□□ -0.86
TGFBR3-206ENST00000470600 TTLL13PA6NNM8 815 aa9.67□□□□□ -0.86
TGFBR3-206ENST00000470600 HAX1O00165 279 aa9.67□□□□□ -0.86
TGFBR3-206ENST00000470600 TLR3O15455 904 aaKnown RBP9.67□□□□□ -0.86
TGFBR3-206ENST00000470600 ARHGEF15O94989 841 aa9.67□□□□□ -0.86
TGFBR3-206ENST00000470600 VTNP04004 478 aa9.67□□□□□ -0.86
TGFBR3-206ENST00000470600 CTSHP09668 335 aa9.67□□□□□ -0.86
TGFBR3-206ENST00000470600 ACRP10323 421 aa9.67□□□□□ -0.86
TGFBR3-206ENST00000470600 GLRA2P23416 452 aa9.67□□□□□ -0.86
TGFBR3-206ENST00000470600 MRPS6P82932 125 aaKnown RBP9.67□□□□□ -0.86
TGFBR3-206ENST00000470600 TMEM62Q0P6H9 643 aa9.67□□□□□ -0.86
TGFBR3-206ENST00000470600 CAPSQ13938 189 aa9.67□□□□□ -0.86
TGFBR3-206ENST00000470600 EMC2Q15006 297 aa9.67□□□□□ -0.86
TGFBR3-206ENST00000470600 RESP18Q5W5W9 173 aa9.67□□□□□ -0.86
TGFBR3-206ENST00000470600 CDCA2Q69YH5 1023 aaPredicted RBP9.67□□□□□ -0.86
TGFBR3-206ENST00000470600 EFCAB12Q6NXP0 572 aa9.67□□□□□ -0.86
TGFBR3-206ENST00000470600 CABP7Q86V35 215 aa9.67□□□□□ -0.86
TGFBR3-206ENST00000470600 FAM228AQ86W67 206 aa9.67□□□□□ -0.86
TGFBR3-206ENST00000470600 KSR1Q8IVT5 923 aa9.67□□□□□ -0.86
TGFBR3-206ENST00000470600 TPH2Q8IWU9 490 aa9.67□□□□□ -0.86
TGFBR3-206ENST00000470600 KRI1Q8N9T8 703 aaKnown RBP9.67□□□□□ -0.86
TGFBR3-206ENST00000470600 TMEM87AQ8NBN3 555 aa9.67□□□□□ -0.86
TGFBR3-206ENST00000470600 VTI1AQ96AJ9 217 aa9.67□□□□□ -0.86
TGFBR3-206ENST00000470600 GDPD2Q9HCC8 539 aa9.67□□□□□ -0.86
TGFBR3-206ENST00000470600 ERVK-5Q9HDB9 667 aa9.67□□□□□ -0.86
TGFBR3-206ENST00000470600 IL23AQ9NPF7 189 aa9.67□□□□□ -0.86
TGFBR3-206ENST00000470600 PRDM5Q9NQX1 630 aaPredicted RBP9.67□□□□□ -0.86
TGFBR3-206ENST00000470600 KIAA1024Q9UPX6 916 aa9.67□□□□□ -0.86
TGFBR3-206ENST00000470600 COLQQ9Y215 455 aaPredicted RBP9.67□□□□□ -0.86
TGFBR3-206ENST00000470600 PDCD11Q14690 1871 aaKnown RBP9.66□□□□□ -0.86
TGFBR3-206ENST00000470600 FRMD3A2A2Y4 597 aa9.66□□□□□ -0.86
TGFBR3-206ENST00000470600 DDX11L8A8MPP1 907 aa9.66□□□□□ -0.86
TGFBR3-206ENST00000470600 RSPH10B2B2RC85 870 aa9.66□□□□□ -0.86
TGFBR3-206ENST00000470600 SOX1O00570 391 aaPredicted RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms