RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 ZNF174Q15697 407 aa15.86■□□□□ 0.13
TOP3B-215ENST00000470338 TTC38Q5R3I4 469 aa15.86■□□□□ 0.13
TOP3B-215ENST00000470338 RTN4RL1Q86UN2 441 aaPredicted RBP15.86■□□□□ 0.13
TOP3B-215ENST00000470338 MYOCDQ8IZQ8 938 aa15.86■□□□□ 0.13
TOP3B-215ENST00000470338 LRRC71Q8N4P6 559 aa15.86■□□□□ 0.13
TOP3B-215ENST00000470338 DYDC2Q96IM9 177 aa15.86■□□□□ 0.13
TOP3B-215ENST00000470338 LXNQ9BS40 222 aa15.86■□□□□ 0.13
TOP3B-215ENST00000470338 FTHL17Q9BXU8 183 aa15.86■□□□□ 0.13
TOP3B-215ENST00000470338 SMC3Q9UQE7 1217 aa15.86■□□□□ 0.13
TOP3B-215ENST00000470338 INSL6Q9Y581 213 aa15.86■□□□□ 0.13
TOP3B-215ENST00000470338 EYSQ5T1H1 3165 aa15.85■□□□□ 0.13
TOP3B-215ENST00000470338 LCHNA4D1U4 455 aa15.85■□□□□ 0.13
TOP3B-215ENST00000470338 MAFO75444 373 aaPredicted RBP15.85■□□□□ 0.13
TOP3B-215ENST00000470338 ARHGEF15O94989 841 aa15.85■□□□□ 0.13
TOP3B-215ENST00000470338 TOB1P50616 345 aaPredicted RBP15.85■□□□□ 0.13
TOP3B-215ENST00000470338 NLRP11P59045 1033 aaKnown RBP15.85■□□□□ 0.13
TOP3B-215ENST00000470338 PAK2Q13177 524 aa15.85■□□□□ 0.13
TOP3B-215ENST00000470338 KIZQ2M2Z5 673 aa15.85■□□□□ 0.13
TOP3B-215ENST00000470338 C4orf32Q8N8J7 132 aa15.85■□□□□ 0.13
TOP3B-215ENST00000470338 TMEM40Q8WWA1 233 aa15.85■□□□□ 0.13
TOP3B-215ENST00000470338 MAP7D2Q96T17 732 aa15.85■□□□□ 0.13
TOP3B-215ENST00000470338 EIF2AK1Q9BQI3 630 aaKnown RBP15.85■□□□□ 0.13
TOP3B-215ENST00000470338 SH2D3AQ9BRG2 576 aa15.85■□□□□ 0.13
TOP3B-215ENST00000470338 ADAMTS10Q9H324 1103 aa15.85■□□□□ 0.13
TOP3B-215ENST00000470338 PRDM12Q9H4Q4 367 aa15.85■□□□□ 0.13
TOP3B-215ENST00000470338 ZSWIM4Q9H7M6 989 aa15.85■□□□□ 0.13
TOP3B-215ENST00000470338 SUGCTQ9HAC7 445 aa15.85■□□□□ 0.13
TOP3B-215ENST00000470338 CYP26B1Q9NR63 512 aa15.85■□□□□ 0.13
TOP3B-215ENST00000470338 NOL7Q9UMY1 257 aaKnown RBP15.85■□□□□ 0.13
TOP3B-215ENST00000470338 AKT3Q9Y243 479 aa15.85■□□□□ 0.13
TOP3B-215ENST00000470338 GINS2Q9Y248 185 aa15.85■□□□□ 0.13
TOP3B-215ENST00000470338 NOC2LQ9Y3T9 749 aaKnown RBP15.85■□□□□ 0.13
TOP3B-215ENST00000470338 PPME1Q9Y570 386 aa15.85■□□□□ 0.13
TOP3B-215ENST00000470338 RPS6KA5O75582 802 aa15.84■□□□□ 0.13
TOP3B-215ENST00000470338 LYPLA2O95372 231 aa15.84■□□□□ 0.13
TOP3B-215ENST00000470338 NPEPPSP55786 919 aa15.84■□□□□ 0.13
TOP3B-215ENST00000470338 CDC42EP1Q00587 391 aa15.84■□□□□ 0.13
TOP3B-215ENST00000470338 CYP4A11Q02928 519 aa15.84■□□□□ 0.13
TOP3B-215ENST00000470338 CTTNQ14247 550 aaKnown RBP15.84■□□□□ 0.13
TOP3B-215ENST00000470338 ODR4Q5SWX8 454 aa15.84■□□□□ 0.13
TOP3B-215ENST00000470338 PLA2G4FQ68DD2 849 aa15.84■□□□□ 0.13
TOP3B-215ENST00000470338 FAM117BQ6P1L5 589 aa15.84■□□□□ 0.13
TOP3B-215ENST00000470338 TPH2Q8IWU9 490 aa15.84■□□□□ 0.13
TOP3B-215ENST00000470338 ZNF579Q8NAF0 562 aaKnown RBP15.84■□□□□ 0.13
TOP3B-215ENST00000470338 NEK9Q8TD19 979 aa15.84■□□□□ 0.13
TOP3B-215ENST00000470338 LINC01599Q8WXQ3 324 aa15.84■□□□□ 0.13
TOP3B-215ENST00000470338 OSMRQ99650 979 aa15.84■□□□□ 0.13
TOP3B-215ENST00000470338 TSPYL2Q9H2G4 693 aaPredicted RBP15.84■□□□□ 0.13
TOP3B-215ENST00000470338 TMX1Q9H3N1 280 aa15.84■□□□□ 0.13
TOP3B-215ENST00000470338 ERVK-5Q9HDB9 667 aa15.84■□□□□ 0.13
TOP3B-215ENST00000470338 NLRC5Q86WI3 1866 aa15.84■□□□□ 0.13
TOP3B-215ENST00000470338 COL4A6Q14031 1691 aa15.83■□□□□ 0.13
TOP3B-215ENST00000470338 ZBTB39O15060 712 aa15.83■□□□□ 0.12
TOP3B-215ENST00000470338 GPR182O15218 404 aa15.83■□□□□ 0.12
TOP3B-215ENST00000470338 UPP2O95045 317 aa15.83■□□□□ 0.12
TOP3B-215ENST00000470338 OR52Z1P0C646 297 aa15.83■□□□□ 0.12
TOP3B-215ENST00000470338 FOSL2P15408 326 aa15.83■□□□□ 0.12
TOP3B-215ENST00000470338 YWHABP31946 246 aaKnown RBP15.83■□□□□ 0.12
TOP3B-215ENST00000470338 DNM2P50570 870 aa15.83■□□□□ 0.12
TOP3B-215ENST00000470338 GPC3P51654 580 aa15.83■□□□□ 0.12
TOP3B-215ENST00000470338 DRP2Q13474 957 aa15.83■□□□□ 0.12
TOP3B-215ENST00000470338 TMEM266Q2M3C6 531 aa15.83■□□□□ 0.12
TOP3B-215ENST00000470338 OTUD6AQ7L8S5 288 aa15.83■□□□□ 0.12
TOP3B-215ENST00000470338 EXOC8Q8IYI6 725 aa15.83■□□□□ 0.12
TOP3B-215ENST00000470338 CRIPAKQ8N1N5 446 aa15.83■□□□□ 0.12
TOP3B-215ENST00000470338 SP7Q8TDD2 431 aaPredicted RBP15.83■□□□□ 0.12
TOP3B-215ENST00000470338 CEP170P1Q96L14 293 aa15.83■□□□□ 0.12
TOP3B-215ENST00000470338 PPP1R16BQ96T49 567 aa15.83■□□□□ 0.12
TOP3B-215ENST00000470338 JPH2Q9BR39 696 aaPredicted RBP15.83■□□□□ 0.12
TOP3B-215ENST00000470338 DHX33Q9H6R0 707 aaKnown RBP15.83■□□□□ 0.12
TOP3B-215ENST00000470338 ST3GAL5Q9UNP4 418 aa15.83■□□□□ 0.12
TOP3B-215ENST00000470338 PRUNE2Q8WUY3 3088 aa15.82■□□□□ 0.12
TOP3B-215ENST00000470338 LINC01553A4QN01 128 aa15.82■□□□□ 0.12
TOP3B-215ENST00000470338 POTEMA6NI47 508 aa15.82■□□□□ 0.12
TOP3B-215ENST00000470338 H3BQV1 296 aa15.82■□□□□ 0.12
TOP3B-215ENST00000470338 EIF4BP23588 611 aaKnown RBP15.82■□□□□ 0.12
TOP3B-215ENST00000470338 TECP42680 631 aa15.82■□□□□ 0.12
TOP3B-215ENST00000470338 NFX1Q12986 1120 aaKnown RBP15.82■□□□□ 0.12
TOP3B-215ENST00000470338 NBR1Q14596 966 aa15.82■□□□□ 0.12
TOP3B-215ENST00000470338 LARP1BQ659C4 914 aaKnown RBP15.82■□□□□ 0.12
TOP3B-215ENST00000470338 MCTP1Q6DN14 999 aa15.82■□□□□ 0.12
TOP3B-215ENST00000470338 FAM228AQ86W67 206 aa15.82■□□□□ 0.12
TOP3B-215ENST00000470338 GAS2L1Q99501 681 aaPredicted RBP15.82■□□□□ 0.12
TOP3B-215ENST00000470338 PCDHB6Q9Y5E3 794 aa15.82■□□□□ 0.12
TOP3B-215ENST00000470338 RALGAPA2Q2PPJ7 1873 aa15.82■□□□□ 0.12
TOP3B-215ENST00000470338 MGEA5O60502 916 aa15.81■□□□□ 0.12
TOP3B-215ENST00000470338 SPATA31C1P0DKV0 1188 aa15.81■□□□□ 0.12
TOP3B-215ENST00000470338 XRCC6P12956 609 aaKnown RBP eCLIP15.81■□□□□ 0.12
TOP3B-215ENST00000470338 RFC5P40937 340 aa15.81■□□□□ 0.12
TOP3B-215ENST00000470338 FXR2P51116 673 aaKnown RBP eCLIP15.81■□□□□ 0.12
TOP3B-215ENST00000470338 ERVK-21P61565 698 aa15.81■□□□□ 0.12
TOP3B-215ENST00000470338 ADGRE1Q14246 886 aa15.81■□□□□ 0.12
TOP3B-215ENST00000470338 FNDC1Q4ZHG4 1894 aaPredicted RBP15.81■□□□□ 0.12
TOP3B-215ENST00000470338 RILPL1Q5EBL4 403 aa15.81■□□□□ 0.12
TOP3B-215ENST00000470338 XKR9Q5GH70 373 aa15.81■□□□□ 0.12
TOP3B-215ENST00000470338 SPRED2Q7Z698 418 aa15.81■□□□□ 0.12
TOP3B-215ENST00000470338 SLC7A3Q8WY07 619 aa15.81■□□□□ 0.12
TOP3B-215ENST00000470338 POLR3CQ9BUI4 534 aaPredicted RBP15.81■□□□□ 0.12
TOP3B-215ENST00000470338 RC3H2Q9HBD1 1191 aaKnown RBP15.81■□□□□ 0.12
TOP3B-215ENST00000470338 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms