RNA–Protein interactions for RNA: ENST00000469670.1

TTC28-205, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-205ENST00000469670 OSMRQ99650 979 aa20.81■□□□□ 0.92
TTC28-205ENST00000469670 AGO4Q9HCK5 861 aaKnown RBP20.81■□□□□ 0.92
TTC28-205ENST00000469670 HCFC2Q9Y5Z7 792 aa20.81■□□□□ 0.92
TTC28-205ENST00000469670 BACH1O14867 736 aa20.8■□□□□ 0.92
TTC28-205ENST00000469670 HOXA2O43364 376 aa20.8■□□□□ 0.92
TTC28-205ENST00000469670 RXRAP19793 462 aa20.8■□□□□ 0.92
TTC28-205ENST00000469670 PBX3P40426 434 aa20.8■□□□□ 0.92
TTC28-205ENST00000469670 DSC3Q14574 896 aa20.8■□□□□ 0.92
TTC28-205ENST00000469670 ZNF484Q5JVG2 852 aa20.8■□□□□ 0.92
TTC28-205ENST00000469670 FAM160B1Q5W0V3 765 aa20.8■□□□□ 0.92
TTC28-205ENST00000469670 CASC1Q6TDU7 716 aa20.8■□□□□ 0.92
TTC28-205ENST00000469670 NFXL1Q6ZNB6 911 aa20.8■□□□□ 0.92
TTC28-205ENST00000469670 FRMD5Q7Z6J6 570 aa20.8■□□□□ 0.92
TTC28-205ENST00000469670 COL1A2P08123 1366 aa20.8■□□□□ 0.92
TTC28-205ENST00000469670 LOXHD1Q8IVV2 1947 aa20.8■□□□□ 0.92
TTC28-205ENST00000469670 DMDP11532 3685 aa20.8■□□□□ 0.92
TTC28-205ENST00000469670 CCNE2O96020 404 aa20.79■□□□□ 0.92
TTC28-205ENST00000469670 ASGR2P07307 311 aa20.79■□□□□ 0.92
TTC28-205ENST00000469670 MTHFRP42898 656 aa20.79■□□□□ 0.92
TTC28-205ENST00000469670 SMC1AQ14683 1233 aaKnown RBP20.79■□□□□ 0.92
TTC28-205ENST00000469670 CEP55Q53EZ4 464 aa20.79■□□□□ 0.92
TTC28-205ENST00000469670 ABHD15Q6UXT9 468 aa20.79■□□□□ 0.92
TTC28-205ENST00000469670 ERMP1Q7Z2K6 904 aa20.79■□□□□ 0.92
TTC28-205ENST00000469670 HEATR3Q7Z4Q2 680 aa20.79■□□□□ 0.92
TTC28-205ENST00000469670 LRRC43Q8N309 656 aa20.79■□□□□ 0.92
TTC28-205ENST00000469670 CCDC82Q8N4S0 544 aa20.79■□□□□ 0.92
TTC28-205ENST00000469670 MRPL43Q8N983 215 aaKnown RBP20.79■□□□□ 0.92
TTC28-205ENST00000469670 NKD2Q969F2 451 aaPredicted RBP20.79■□□□□ 0.92
TTC28-205ENST00000469670 MFSD1Q9H3U5 465 aa20.79■□□□□ 0.92
TTC28-205ENST00000469670 RNF19AQ9NV58 838 aa20.79■□□□□ 0.92
TTC28-205ENST00000469670 SPG21Q9NZD8 308 aa20.79■□□□□ 0.92
TTC28-205ENST00000469670 C2orf71A6NGG8 1288 aa20.78■□□□□ 0.92
TTC28-205ENST00000469670 CCDC69A6NI79 296 aa20.78■□□□□ 0.92
TTC28-205ENST00000469670 ZBTB42B2RXF5 422 aa20.78■□□□□ 0.92
TTC28-205ENST00000469670 DDX39AO00148 427 aaKnown RBP20.78■□□□□ 0.92
TTC28-205ENST00000469670 PRC1O43663 620 aa20.78■□□□□ 0.92
TTC28-205ENST00000469670 GSPT1P15170 499 aaKnown RBP20.78■□□□□ 0.92
TTC28-205ENST00000469670 MCTP2Q6DN12 878 aa20.78■□□□□ 0.92
TTC28-205ENST00000469670 PDXDC2PQ6P474 469 aa20.78■□□□□ 0.92
TTC28-205ENST00000469670 CCDC60Q8IWA6 550 aaPredicted RBP20.78■□□□□ 0.92
TTC28-205ENST00000469670 ABI1Q8IZP0 508 aa20.78■□□□□ 0.92
TTC28-205ENST00000469670 TMTC2Q8N394 836 aa20.78■□□□□ 0.92
TTC28-205ENST00000469670 PGBD1Q96JS3 809 aa20.78■□□□□ 0.92
TTC28-205ENST00000469670 MTA3Q9BTC8 594 aa20.78■□□□□ 0.92
TTC28-205ENST00000469670 ZNF302Q9NR11 478 aa20.78■□□□□ 0.92
TTC28-205ENST00000469670 RIF1Q5UIP0 2472 aaKnown RBP20.78■□□□□ 0.92
TTC28-205ENST00000469670 CLASP2O75122 1294 aaKnown RBP20.77■□□□□ 0.92
TTC28-205ENST00000469670 GPR32O75388 356 aa20.77■□□□□ 0.92
TTC28-205ENST00000469670 VTNP04004 478 aa20.77■□□□□ 0.92
TTC28-205ENST00000469670 WEE2P0C1S8 567 aa20.77■□□□□ 0.92
TTC28-205ENST00000469670 CALM1P0DP23 149 aa20.77■□□□□ 0.92
TTC28-205ENST00000469670 CALM2P0DP24 149 aa20.77■□□□□ 0.92
TTC28-205ENST00000469670 CALM3P0DP25 149 aa20.77■□□□□ 0.92
TTC28-205ENST00000469670 CHMLP26374 656 aa20.77■□□□□ 0.92
TTC28-205ENST00000469670 ID4P47928 161 aa20.77■□□□□ 0.92
TTC28-205ENST00000469670 CLCN5P51795 746 aa20.77■□□□□ 0.92
TTC28-205ENST00000469670 ZDHHC14Q8IZN3 488 aa20.77■□□□□ 0.92
TTC28-205ENST00000469670 TDRD5Q8NAT2 981 aaKnown RBP20.77■□□□□ 0.92
TTC28-205ENST00000469670 LIMD1Q9UGP4 676 aa20.77■□□□□ 0.92
TTC28-205ENST00000469670 MEIS1O00470 390 aa20.76■□□□□ 0.91
TTC28-205ENST00000469670 SH2B2O14492 632 aaPredicted RBP20.76■□□□□ 0.91
TTC28-205ENST00000469670 C22orf31O95567 290 aa20.76■□□□□ 0.91
TTC28-205ENST00000469670 CA8P35219 290 aa20.76■□□□□ 0.91
TTC28-205ENST00000469670 RARS2Q5T160 578 aaKnown RBP20.76■□□□□ 0.91
TTC28-205ENST00000469670 TTC22Q5TAA0 569 aa20.76■□□□□ 0.91
TTC28-205ENST00000469670 TMTC3Q6ZXV5 915 aa20.76■□□□□ 0.91
TTC28-205ENST00000469670 RAB11FIP4Q86YS3 637 aa20.76■□□□□ 0.91
TTC28-205ENST00000469670 ADSSL1Q8N142 457 aa20.76■□□□□ 0.91
TTC28-205ENST00000469670 SLC39A11Q8N1S5 342 aa20.76■□□□□ 0.91
TTC28-205ENST00000469670 FOSP01100 380 aaPredicted RBP20.75■□□□□ 0.91
TTC28-205ENST00000469670 ZSCAN20P17040 1043 aaPredicted RBP20.75■□□□□ 0.91
TTC28-205ENST00000469670 ATP4AP20648 1035 aa20.75■□□□□ 0.91
TTC28-205ENST00000469670 KIAA1841Q6NSI8 718 aa20.75■□□□□ 0.91
TTC28-205ENST00000469670 SWSAP1Q6NVH7 229 aa20.75■□□□□ 0.91
TTC28-205ENST00000469670 MIS18BP1Q6P0N0 1132 aa20.75■□□□□ 0.91
TTC28-205ENST00000469670 ECHDC2Q86YB7 292 aa20.75■□□□□ 0.91
TTC28-205ENST00000469670 PLCD3Q8N3E9 789 aa20.75■□□□□ 0.91
TTC28-205ENST00000469670 METTL13Q8N6R0 699 aa20.75■□□□□ 0.91
TTC28-205ENST00000469670 C12orf76Q8N812 135 aaPredicted RBP20.75■□□□□ 0.91
TTC28-205ENST00000469670 TMEM87BQ96K49 555 aa20.75■□□□□ 0.91
TTC28-205ENST00000469670 ANO3Q9BYT9 981 aa20.75■□□□□ 0.91
TTC28-205ENST00000469670 FAM186AA6NE01 2351 aa20.75■□□□□ 0.91
TTC28-205ENST00000469670 MCM5P33992 734 aa20.74■□□□□ 0.91
TTC28-205ENST00000469670 BMS1Q14692 1282 aaKnown RBP20.74■□□□□ 0.91
TTC28-205ENST00000469670 ATAT1Q5SQI0 421 aa20.74■□□□□ 0.91
TTC28-205ENST00000469670 WWC2Q6AWC2 1192 aa20.74■□□□□ 0.91
TTC28-205ENST00000469670 CKAP2LQ8IYA6 745 aa20.74■□□□□ 0.91
TTC28-205ENST00000469670 RNF169Q8NCN4 708 aa20.74■□□□□ 0.91
TTC28-205ENST00000469670 FLCNQ8NFG4 579 aa20.74■□□□□ 0.91
TTC28-205ENST00000469670 MAP4K1Q92918 833 aa20.74■□□□□ 0.91
TTC28-205ENST00000469670 RIC8AQ9NPQ8 531 aa20.74■□□□□ 0.91
TTC28-205ENST00000469670 DZANK1Q9NVP4 752 aa20.74■□□□□ 0.91
TTC28-205ENST00000469670 DBR1Q9UK59 544 aaKnown RBP20.74■□□□□ 0.91
TTC28-205ENST00000469670 USTQ9Y2C2 406 aa20.74■□□□□ 0.91
TTC28-205ENST00000469670 RBM8AQ9Y5S9 174 aaKnown RBP20.74■□□□□ 0.91
TTC28-205ENST00000469670 SGSM2O43147 1006 aa20.73■□□□□ 0.91
TTC28-205ENST00000469670 CXCL14O95715 111 aa20.73■□□□□ 0.91
TTC28-205ENST00000469670 ZNF76P36508 570 aa20.73■□□□□ 0.91
TTC28-205ENST00000469670 LIFRP42702 1097 aa20.73■□□□□ 0.91
TTC28-205ENST00000469670 NAPAP54920 295 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms