RNA–Protein interactions for RNA: ENST00000469641.5

ATP13A1-205, Transcript of ATPase 13A1, human

TSL 2

Gene ATP13A1, Length 4,241 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP13A1-205	ENST00000469641	CDKAL1	Q5VV42	579 aa		11.41	□□□□□ -0.58
ATP13A1-205	ENST00000469641	CCNI2	Q6ZMN8	369 aa	Predicted RBP	11.41	□□□□□ -0.58
ATP13A1-205	ENST00000469641	AK8	Q96MA6	479 aa		11.41	□□□□□ -0.58
ATP13A1-205	ENST00000469641	TSC22D3	Q99576	134 aa		11.41	□□□□□ -0.58
ATP13A1-205	ENST00000469641	DEFB129	Q9H1M3	183 aa		11.41	□□□□□ -0.58
ATP13A1-205	ENST00000469641	VCX3B	Q9H321	246 aa		11.41	□□□□□ -0.58
ATP13A1-205	ENST00000469641	RGL1	Q9NZL6	768 aa		11.41	□□□□□ -0.58
ATP13A1-205	ENST00000469641	PARP2	Q9UGN5	583 aa		11.41	□□□□□ -0.58
ATP13A1-205	ENST00000469641	RABGAP1	Q9Y3P9	1069 aa		11.41	□□□□□ -0.58
ATP13A1-205	ENST00000469641	COL4A3BP	Q9Y5P4	624 aa		11.41	□□□□□ -0.58
ATP13A1-205	ENST00000469641	ARHGAP4	P98171	946 aa		11.41	□□□□□ -0.58
ATP13A1-205	ENST00000469641	ZNF543	Q08ER8	600 aa		11.41	□□□□□ -0.58
ATP13A1-205	ENST00000469641	PHLDB3	Q6NSJ2	640 aa		11.41	□□□□□ -0.58
ATP13A1-205	ENST00000469641	C16orf86	Q6ZW13	317 aa		11.41	□□□□□ -0.58
ATP13A1-205	ENST00000469641	SCYL3	Q8IZE3	742 aa		11.41	□□□□□ -0.58
ATP13A1-205	ENST00000469641	ARHGAP24	Q8N264	748 aa		11.41	□□□□□ -0.58
ATP13A1-205	ENST00000469641	ARMC2	Q8NEN0	867 aa		11.41	□□□□□ -0.58
ATP13A1-205	ENST00000469641	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	11.41	□□□□□ -0.58	3e-6	■■■□□ 15.8
ATP13A1-205	ENST00000469641	CFAP61	Q8NHU2	1237 aa		11.41	□□□□□ -0.58
ATP13A1-205	ENST00000469641	GDAP1	Q8TB36	358 aa		11.41	□□□□□ -0.58
ATP13A1-205	ENST00000469641	MS4A14	Q96JA4	679 aa		11.41	□□□□□ -0.58
ATP13A1-205	ENST00000469641	FMO2	Q99518	471 aa		11.41	□□□□□ -0.58
ATP13A1-205	ENST00000469641	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	11.41	□□□□□ -0.58
ATP13A1-205	ENST00000469641	ABCB11	O95342	1321 aa		11.41	□□□□□ -0.58
ATP13A1-205	ENST00000469641	DLAT	P10515	647 aa	Known RBP	11.4	□□□□□ -0.58
ATP13A1-205	ENST00000469641	SBK1	Q52WX2	424 aa		11.4	□□□□□ -0.58
ATP13A1-205	ENST00000469641	RCSD1	Q6JBY9	416 aa		11.4	□□□□□ -0.58
ATP13A1-205	ENST00000469641	TMEM139	Q8IV31	216 aa		11.4	□□□□□ -0.58
ATP13A1-205	ENST00000469641	PROM2	Q8N271	834 aa		11.4	□□□□□ -0.58
ATP13A1-205	ENST00000469641	SYNC	Q9H7C4	482 aa		11.4	□□□□□ -0.58
ATP13A1-205	ENST00000469641	TBK1	Q9UHD2	729 aa		11.4	□□□□□ -0.58
ATP13A1-205	ENST00000469641	UST	Q9Y2C2	406 aa		11.4	□□□□□ -0.58
ATP13A1-205	ENST00000469641	RIC1	Q4ADV7	1423 aa		11.4	□□□□□ -0.58
ATP13A1-205	ENST00000469641	TARSL2	A2RTX5	802 aa	Known RBP	11.4	□□□□□ -0.58
ATP13A1-205	ENST00000469641	PRPF6	O94906	941 aa	Known RBP	11.4	□□□□□ -0.58
ATP13A1-205	ENST00000469641	PDHA1	P08559	390 aa		11.4	□□□□□ -0.58
ATP13A1-205	ENST00000469641	CAPRIN2	Q6IMN6	1127 aa	Known RBP	11.4	□□□□□ -0.58
ATP13A1-205	ENST00000469641	ZNF449	Q6P9G9	518 aa		11.4	□□□□□ -0.58
ATP13A1-205	ENST00000469641	ATP6V1G3	Q96LB4	118 aa		11.4	□□□□□ -0.58
ATP13A1-205	ENST00000469641	RMDN3	Q96TC7	470 aa		11.4	□□□□□ -0.58
ATP13A1-205	ENST00000469641	MLXIPL	Q9NP71	852 aa		11.4	□□□□□ -0.58
ATP13A1-205	ENST00000469641	IFNB1	P01574	187 aa		11.4	□□□□□ -0.58
ATP13A1-205	ENST00000469641	TROVE2	P10155	538 aa	Known RBP eCLIP	11.4	□□□□□ -0.58
ATP13A1-205	ENST00000469641	ADCY8	P40145	1251 aa		11.4	□□□□□ -0.58
ATP13A1-205	ENST00000469641	SNRNP48	Q6IEG0	339 aa	Known RBP	11.4	□□□□□ -0.58
ATP13A1-205	ENST00000469641	CEP128	Q6ZU80	1094 aa		11.4	□□□□□ -0.58
ATP13A1-205	ENST00000469641	ADSSL1	Q8N142	457 aa		11.4	□□□□□ -0.58
ATP13A1-205	ENST00000469641	NEK9	Q8TD19	979 aa		11.4	□□□□□ -0.58
ATP13A1-205	ENST00000469641	ZNF473	Q8WTR7	871 aa	Known RBP	11.4	□□□□□ -0.58
ATP13A1-205	ENST00000469641	HSD3B7	Q9H2F3	369 aa		11.4	□□□□□ -0.58
ATP13A1-205	ENST00000469641	CNOT10	Q9H9A5	744 aa	Known RBP	11.4	□□□□□ -0.58
ATP13A1-205	ENST00000469641	RAB21	Q9UL25	225 aa		11.4	□□□□□ -0.58
ATP13A1-205	ENST00000469641	LRRIQ4	A6NIV6	560 aa		11.4	□□□□□ -0.59
ATP13A1-205	ENST00000469641	CNGA1	P29973	690 aa		11.4	□□□□□ -0.59
ATP13A1-205	ENST00000469641	HDLBP	Q00341	1268 aa	Known RBP	11.4	□□□□□ -0.59
ATP13A1-205	ENST00000469641	PROCA1	Q8NCQ7	364 aa	Predicted RBP	11.4	□□□□□ -0.59
ATP13A1-205	ENST00000469641	FNBP1	Q96RU3	617 aa		11.4	□□□□□ -0.59
ATP13A1-205	ENST00000469641	AZI2	Q9H6S1	392 aa		11.4	□□□□□ -0.59
ATP13A1-205	ENST00000469641	SNX12	Q9UMY4	172 aa		11.4	□□□□□ -0.59
ATP13A1-205	ENST00000469641		K7ENM7	598 aa		11.39	□□□□□ -0.59
ATP13A1-205	ENST00000469641	ATP2A2	P16615	1042 aa	Known RBP	11.39	□□□□□ -0.59
ATP13A1-205	ENST00000469641	LSP1	P33241	339 aa		11.39	□□□□□ -0.59
ATP13A1-205	ENST00000469641	KLK7	P49862	253 aa		11.39	□□□□□ -0.59
ATP13A1-205	ENST00000469641	SEC23A	Q15436	765 aa		11.39	□□□□□ -0.59
ATP13A1-205	ENST00000469641	ANKRD40	Q6AI12	368 aa		11.39	□□□□□ -0.59
ATP13A1-205	ENST00000469641	ALKBH5	Q6P6C2	394 aa	Known RBP	11.39	□□□□□ -0.59
ATP13A1-205	ENST00000469641	PHLDB2	Q86SQ0	1253 aa		11.39	□□□□□ -0.59
ATP13A1-205	ENST00000469641	KIRREL3	Q8IZU9	778 aa		11.39	□□□□□ -0.59
ATP13A1-205	ENST00000469641	DDX47	Q9H0S4	455 aa	Known RBP	11.39	□□□□□ -0.59
ATP13A1-205	ENST00000469641	EHD2	Q9NZN4	543 aa		11.39	□□□□□ -0.59
ATP13A1-205	ENST00000469641	GGT7	Q9UJ14	662 aa		11.39	□□□□□ -0.59
ATP13A1-205	ENST00000469641	DUSP10	Q9Y6W6	482 aa		11.39	□□□□□ -0.59
ATP13A1-205	ENST00000469641	CHD2	O14647	1828 aa	Known RBP	11.39	□□□□□ -0.59
ATP13A1-205	ENST00000469641	PFDN1	O60925	122 aa		11.39	□□□□□ -0.59
ATP13A1-205	ENST00000469641	SLIT3	O75094	1523 aa		11.39	□□□□□ -0.59
ATP13A1-205	ENST00000469641	GFPT2	O94808	682 aa		11.39	□□□□□ -0.59
ATP13A1-205	ENST00000469641	SERPING1	P05155	500 aa		11.39	□□□□□ -0.59
ATP13A1-205	ENST00000469641	SMTN	P53814	917 aa		11.39	□□□□□ -0.59
ATP13A1-205	ENST00000469641	MESD	Q14696	234 aa		11.39	□□□□□ -0.59
ATP13A1-205	ENST00000469641	PPP2R5E	Q16537	467 aa		11.39	□□□□□ -0.59
ATP13A1-205	ENST00000469641	TEX2	Q8IWB9	1127 aa		11.39	□□□□□ -0.59
ATP13A1-205	ENST00000469641	CNTNAP5	Q8WYK1	1306 aa		11.39	□□□□□ -0.59
ATP13A1-205	ENST00000469641	TEKT3	Q9BXF9	490 aa		11.39	□□□□□ -0.59
ATP13A1-205	ENST00000469641	JMJD4	Q9H9V9	463 aa		11.39	□□□□□ -0.59
ATP13A1-205	ENST00000469641	MYOZ2	Q9NPC6	264 aa		11.39	□□□□□ -0.59
ATP13A1-205	ENST00000469641	DNAJC17	Q9NVM6	304 aa	Known RBP	11.39	□□□□□ -0.59
ATP13A1-205	ENST00000469641	TRPC6	Q9Y210	931 aa		11.39	□□□□□ -0.59
ATP13A1-205	ENST00000469641	RGPD1	P0DJD0	1748 aa		11.39	□□□□□ -0.59
ATP13A1-205	ENST00000469641	MAP2K7	O14733	419 aa		11.39	□□□□□ -0.59
ATP13A1-205	ENST00000469641	LRRN2	O75325	713 aa		11.39	□□□□□ -0.59
ATP13A1-205	ENST00000469641	PLA2G4B	P0C869	781 aa		11.39	□□□□□ -0.59
ATP13A1-205	ENST00000469641	HHIPL2	Q6UWX4	724 aa		11.39	□□□□□ -0.59
ATP13A1-205	ENST00000469641	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	11.39	□□□□□ -0.59
ATP13A1-205	ENST00000469641	AGBL1	Q96MI9	1066 aa		11.39	□□□□□ -0.59
ATP13A1-205	ENST00000469641	NPHP3-ACAD11	A0A0J9YXS1	232 aa		11.38	□□□□□ -0.59
ATP13A1-205	ENST00000469641	ARHGAP42	A6NI28	874 aa		11.38	□□□□□ -0.59
ATP13A1-205	ENST00000469641	RASGRF2	O14827	1237 aa		11.38	□□□□□ -0.59
ATP13A1-205	ENST00000469641	DDN	O94850	711 aa	Predicted RBP	11.38	□□□□□ -0.59
ATP13A1-205	ENST00000469641	TM4SF1	P30408	202 aa		11.38	□□□□□ -0.59
ATP13A1-205	ENST00000469641	PPP4C	P60510	307 aa		11.38	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms