RNA–Protein interactions for RNA: ENST00000469415.1

MCF2L-221, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 3,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-221ENST00000469415 COL20A1Q9P218 1284 aa19.48■□□□□ 0.71
MCF2L-221ENST00000469415 TMX2Q9Y320 296 aa19.48■□□□□ 0.71
MCF2L-221ENST00000469415 TMEM110-MUSTN1A8MSY1 372 aa19.47■□□□□ 0.71
MCF2L-221ENST00000469415 K7ENM7 598 aa19.47■□□□□ 0.71
MCF2L-221ENST00000469415 ATP1A2P50993 1020 aa19.47■□□□□ 0.71
MCF2L-221ENST00000469415 DLG4P78352 724 aa19.47■□□□□ 0.71
MCF2L-221ENST00000469415 HDLBPQ00341 1268 aaKnown RBP19.47■□□□□ 0.71
MCF2L-221ENST00000469415 EPHA7Q15375 998 aa19.47■□□□□ 0.71
MCF2L-221ENST00000469415 ZNF746Q6NUN9 644 aaPredicted RBP19.47■□□□□ 0.71
MCF2L-221ENST00000469415 RSBN1LQ6PCB5 846 aaPredicted RBP19.47■□□□□ 0.71
MCF2L-221ENST00000469415 NSMFQ6X4W1 530 aa19.47■□□□□ 0.71
MCF2L-221ENST00000469415 DAAM2Q86T65 1068 aa19.47■□□□□ 0.71
MCF2L-221ENST00000469415 AFAP1L1Q8TED9 768 aa19.47■□□□□ 0.71
MCF2L-221ENST00000469415 CALCOCO1Q9P1Z2 691 aa19.47■□□□□ 0.71
MCF2L-221ENST00000469415 LCMT1Q9UIC8 334 aa19.47■□□□□ 0.71
MCF2L-221ENST00000469415 TBX3O15119 743 aa19.47■□□□□ 0.71
MCF2L-221ENST00000469415 HIP1RO75146 1068 aa19.47■□□□□ 0.71
MCF2L-221ENST00000469415 PSMD10O75832 226 aa19.47■□□□□ 0.71
MCF2L-221ENST00000469415 ITGB5P18084 799 aa19.47■□□□□ 0.71
MCF2L-221ENST00000469415 PRELPP51888 382 aa19.47■□□□□ 0.71
MCF2L-221ENST00000469415 SOX10P56693 466 aa19.47■□□□□ 0.71
MCF2L-221ENST00000469415 MKRN4PQ13434 485 aaPredicted RBP19.47■□□□□ 0.71
MCF2L-221ENST00000469415 STYK1Q6J9G0 422 aa19.47■□□□□ 0.71
MCF2L-221ENST00000469415 C1orf186Q6ZWK4 172 aa19.47■□□□□ 0.71
MCF2L-221ENST00000469415 FRMD5Q7Z6J6 570 aa19.47■□□□□ 0.71
MCF2L-221ENST00000469415 RUFY1Q96T51 708 aa19.47■□□□□ 0.71
MCF2L-221ENST00000469415 KIFC3Q9BVG8 833 aa19.47■□□□□ 0.71
MCF2L-221ENST00000469415 DDX47Q9H0S4 455 aaKnown RBP19.47■□□□□ 0.71
MCF2L-221ENST00000469415 DNAJC12Q9UKB3 198 aa19.47■□□□□ 0.71
MCF2L-221ENST00000469415 PJA2O43164 708 aa19.46■□□□□ 0.71
MCF2L-221ENST00000469415 CLSTN1O94985 981 aa19.46■□□□□ 0.71
MCF2L-221ENST00000469415 EPM2AIP1Q7L775 607 aaPredicted RBP19.46■□□□□ 0.71
MCF2L-221ENST00000469415 PALB2Q86YC2 1186 aa19.46■□□□□ 0.71
MCF2L-221ENST00000469415 C7orf43Q8WVR3 580 aa19.46■□□□□ 0.71
MCF2L-221ENST00000469415 EVI5O60447 810 aa19.46■□□□□ 0.71
MCF2L-221ENST00000469415 MCM3P25205 808 aa19.46■□□□□ 0.71
MCF2L-221ENST00000469415 DRAP1Q14919 205 aaPredicted RBP19.46■□□□□ 0.71
MCF2L-221ENST00000469415 TAF3Q5VWG9 929 aa19.46■□□□□ 0.71
MCF2L-221ENST00000469415 FLAD1Q8NFF5 587 aa19.46■□□□□ 0.71
MCF2L-221ENST00000469415 CHURC1Q8WUH1 139 aa19.46■□□□□ 0.71
MCF2L-221ENST00000469415 ARL8AQ96BM9 186 aa19.46■□□□□ 0.71
MCF2L-221ENST00000469415 AIPL1Q9NZN9 384 aa19.46■□□□□ 0.71
MCF2L-221ENST00000469415 CIITAP33076 1130 aa19.46■□□□□ 0.71
MCF2L-221ENST00000469415 MIER3Q7Z3K6 550 aa19.46■□□□□ 0.71
MCF2L-221ENST00000469415 MMGT1Q8N4V1 131 aa19.46■□□□□ 0.71
MCF2L-221ENST00000469415 NUCKS1Q9H1E3 243 aaKnown RBP19.46■□□□□ 0.71
MCF2L-221ENST00000469415 VCPKMTQ9H867 229 aa19.46■□□□□ 0.71
MCF2L-221ENST00000469415 USP20Q9Y2K6 914 aa19.46■□□□□ 0.71
MCF2L-221ENST00000469415 TARSL2A2RTX5 802 aaKnown RBP19.45■□□□□ 0.7
MCF2L-221ENST00000469415 GOLGA6CA6NDK9 693 aa19.45■□□□□ 0.7
MCF2L-221ENST00000469415 GOLGA6DP0CG33 693 aa19.45■□□□□ 0.7
MCF2L-221ENST00000469415 ITGA4P13612 1032 aa19.45■□□□□ 0.7
MCF2L-221ENST00000469415 PSMC2P35998 433 aaKnown RBP19.45■□□□□ 0.7
MCF2L-221ENST00000469415 GCLMP48507 274 aa19.45■□□□□ 0.7
MCF2L-221ENST00000469415 MOXD1Q6UVY6 613 aa19.45■□□□□ 0.7
MCF2L-221ENST00000469415 PPP4R3CPQ6ZMV5 832 aa19.45■□□□□ 0.7
MCF2L-221ENST00000469415 CCDC127Q96BQ5 260 aa19.45■□□□□ 0.7
MCF2L-221ENST00000469415 KCNH7Q9NS40 1196 aa19.45■□□□□ 0.7
MCF2L-221ENST00000469415 GOLGA6AQ9NYA3 693 aa19.45■□□□□ 0.7
MCF2L-221ENST00000469415 TAS2R14Q9NYV8 317 aa19.45■□□□□ 0.7
MCF2L-221ENST00000469415 ASTN2O75129 1339 aaPredicted RBP19.45■□□□□ 0.7
MCF2L-221ENST00000469415 DDX3XO00571 662 aaKnown RBP eCLIP19.45■□□□□ 0.7
MCF2L-221ENST00000469415 TUBBP07437 444 aa19.45■□□□□ 0.7
MCF2L-221ENST00000469415 NPEPPSP55786 919 aa19.45■□□□□ 0.7
MCF2L-221ENST00000469415 ZNF211Q13398 564 aaPredicted RBP19.45■□□□□ 0.7
MCF2L-221ENST00000469415 PEX26Q7Z412 305 aa19.45■□□□□ 0.7
MCF2L-221ENST00000469415 EDEM3Q9BZQ6 932 aa19.45■□□□□ 0.7
MCF2L-221ENST00000469415 FRMD4BQ9Y2L6 1034 aa19.45■□□□□ 0.7
MCF2L-221ENST00000469415 RAD51CO43502 376 aa19.44■□□□□ 0.7
MCF2L-221ENST00000469415 PPP1R12BO60237 982 aaPredicted RBP19.44■□□□□ 0.7
MCF2L-221ENST00000469415 DPEP1P16444 411 aa19.44■□□□□ 0.7
MCF2L-221ENST00000469415 ACTN2P35609 894 aa19.44■□□□□ 0.7
MCF2L-221ENST00000469415 PLA2G4FQ68DD2 849 aa19.44■□□□□ 0.7
MCF2L-221ENST00000469415 PADI6Q6TGC4 694 aa19.44■□□□□ 0.7
MCF2L-221ENST00000469415 FAM151AQ8WW52 585 aa19.44■□□□□ 0.7
MCF2L-221ENST00000469415 POLR3CQ9BUI4 534 aaPredicted RBP19.44■□□□□ 0.7
MCF2L-221ENST00000469415 SIX2Q9NPC8 291 aa19.44■□□□□ 0.7
MCF2L-221ENST00000469415 TCEAL9Q9UHQ7 104 aa19.44■□□□□ 0.7
MCF2L-221ENST00000469415 MRPL11Q9Y3B7 192 aaKnown RBP19.44■□□□□ 0.7
MCF2L-221ENST00000469415 TESPA1A2RU30 521 aaPredicted RBP19.44■□□□□ 0.7
MCF2L-221ENST00000469415 STAT1P42224 750 aa19.44■□□□□ 0.7
MCF2L-221ENST00000469415 SLC15A2Q16348 729 aa19.44■□□□□ 0.7
MCF2L-221ENST00000469415 ZNF720Q7Z2F6 126 aa19.44■□□□□ 0.7
MCF2L-221ENST00000469415 RNF10Q8N5U6 811 aaKnown RBP19.44■□□□□ 0.7
MCF2L-221ENST00000469415 TTLL6Q8N841 843 aa19.44■□□□□ 0.7
MCF2L-221ENST00000469415 AENQ8WTP8 325 aaKnown RBP19.44■□□□□ 0.7
MCF2L-221ENST00000469415 CBWD1Q9BRT8 395 aa19.44■□□□□ 0.7
MCF2L-221ENST00000469415 TEKT3Q9BXF9 490 aa19.44■□□□□ 0.7
MCF2L-221ENST00000469415 AGPAT3Q9NRZ7 376 aa19.44■□□□□ 0.7
MCF2L-221ENST00000469415 HERC5Q9UII4 1024 aaKnown RBP19.44■□□□□ 0.7
MCF2L-221ENST00000469415 TRIM66O15016 1216 aa19.43■□□□□ 0.7
MCF2L-221ENST00000469415 CALCAP01258 141 aa19.43■□□□□ 0.7
MCF2L-221ENST00000469415 H2AFZP0C0S5 128 aa19.43■□□□□ 0.7
MCF2L-221ENST00000469415 GALCP54803 685 aa19.43■□□□□ 0.7
MCF2L-221ENST00000469415 PRKG1Q13976 671 aa19.43■□□□□ 0.7
MCF2L-221ENST00000469415 MEI1Q5TIA1 1274 aa19.43■□□□□ 0.7
MCF2L-221ENST00000469415 BTNL9Q6UXG8 535 aa19.43■□□□□ 0.7
MCF2L-221ENST00000469415 H2AFVQ71UI9 128 aa19.43■□□□□ 0.7
MCF2L-221ENST00000469415 DEFB132Q7Z7B7 95 aa19.43■□□□□ 0.7
MCF2L-221ENST00000469415 C10orf67Q8IYJ2 551 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms