RNA–Protein interactions for RNA: ENST00000468963.1

SDCCAG3-209, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 2

Gene SDCCAG3, Length 686 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-209ENST00000468963 MMP1P03956 469 aa16.72■□□□□ 0.27
SDCCAG3-209ENST00000468963 ITGB1P05556 798 aa16.72■□□□□ 0.27
SDCCAG3-209ENST00000468963 PAN2Q504Q3 1202 aaKnown RBP16.72■□□□□ 0.27
SDCCAG3-209ENST00000468963 EFCAB12Q6NXP0 572 aa16.72■□□□□ 0.27
SDCCAG3-209ENST00000468963 B3GNT9Q6UX72 402 aa16.72■□□□□ 0.27
SDCCAG3-209ENST00000468963 BLIDQ8IZY5 108 aa16.72■□□□□ 0.27
SDCCAG3-209ENST00000468963 FAM177A1Q8N128 213 aaPredicted RBP16.72■□□□□ 0.27
SDCCAG3-209ENST00000468963 GJD3Q8N144 294 aa16.72■□□□□ 0.27
SDCCAG3-209ENST00000468963 KLHL23Q8NBE8 558 aa16.72■□□□□ 0.27
SDCCAG3-209ENST00000468963 GJA10Q969M2 543 aa16.72■□□□□ 0.27
SDCCAG3-209ENST00000468963 MBOAT7Q96N66 472 aa16.72■□□□□ 0.27
SDCCAG3-209ENST00000468963 AIFM3Q96NN9 605 aa16.72■□□□□ 0.27
SDCCAG3-209ENST00000468963 OSMRQ99650 979 aa16.72■□□□□ 0.27
SDCCAG3-209ENST00000468963 C22orf23Q9BZE7 217 aa16.72■□□□□ 0.27
SDCCAG3-209ENST00000468963 UPF3BQ9BZI7 483 aaKnown RBP16.72■□□□□ 0.27
SDCCAG3-209ENST00000468963 ADAMTS10Q9H324 1103 aa16.72■□□□□ 0.27
SDCCAG3-209ENST00000468963 UNC45AQ9H3U1 944 aa16.72■□□□□ 0.27
SDCCAG3-209ENST00000468963 C1orf112Q9NSG2 853 aa16.72■□□□□ 0.27
SDCCAG3-209ENST00000468963 CLDND1Q9NY35 253 aa16.72■□□□□ 0.27
SDCCAG3-209ENST00000468963 TCEAL9Q9UHQ7 104 aa16.72■□□□□ 0.27
SDCCAG3-209ENST00000468963 RAPGEFL1Q9UHV5 662 aa16.72■□□□□ 0.27
SDCCAG3-209ENST00000468963 LRFN2Q9ULH4 789 aa16.72■□□□□ 0.27
SDCCAG3-209ENST00000468963 ATG2AQ2TAZ0 1938 aa16.71■□□□□ 0.27
SDCCAG3-209ENST00000468963 PI4K2BG5E9Z4 385 aa16.71■□□□□ 0.27
SDCCAG3-209ENST00000468963 GAS7O60861 476 aa16.71■□□□□ 0.27
SDCCAG3-209ENST00000468963 STBD1O95210 358 aa16.71■□□□□ 0.27
SDCCAG3-209ENST00000468963 OATP04181 439 aa16.71■□□□□ 0.27
SDCCAG3-209ENST00000468963 CLCN3P51790 818 aa16.71■□□□□ 0.27
SDCCAG3-209ENST00000468963 DLX2Q07687 328 aaPredicted RBP16.71■□□□□ 0.27
SDCCAG3-209ENST00000468963 TARBP2Q15633 366 aaKnown RBP16.71■□□□□ 0.27
SDCCAG3-209ENST00000468963 UGCGQ16739 394 aa16.71■□□□□ 0.27
SDCCAG3-209ENST00000468963 FAM102BQ5T8I3 360 aa16.71■□□□□ 0.27
SDCCAG3-209ENST00000468963 LRCH2Q5VUJ6 765 aa16.71■□□□□ 0.27
SDCCAG3-209ENST00000468963 GALNT17Q6IS24 598 aa16.71■□□□□ 0.27
SDCCAG3-209ENST00000468963 DAGLBQ8NCG7 672 aa16.71■□□□□ 0.27
SDCCAG3-209ENST00000468963 PPP1R16BQ96T49 567 aa16.71■□□□□ 0.27
SDCCAG3-209ENST00000468963 TEKT3Q9BXF9 490 aa16.71■□□□□ 0.27
SDCCAG3-209ENST00000468963 PDRG1Q9NUG6 133 aa16.71■□□□□ 0.27
SDCCAG3-209ENST00000468963 DENND3A2RUS2 1198 aa16.7■□□□□ 0.26
SDCCAG3-209ENST00000468963 CPLX1O14810 134 aa16.7■□□□□ 0.26
SDCCAG3-209ENST00000468963 TDP2O95551 362 aa16.7■□□□□ 0.26
SDCCAG3-209ENST00000468963 TMOD1P28289 359 aa16.7■□□□□ 0.26
SDCCAG3-209ENST00000468963 SFNP31947 248 aa16.7■□□□□ 0.26
SDCCAG3-209ENST00000468963 GTF2F1P35269 517 aaKnown RBP eCLIP16.7■□□□□ 0.26
SDCCAG3-209ENST00000468963 NLRP11P59045 1033 aaKnown RBP16.7■□□□□ 0.26
SDCCAG3-209ENST00000468963 STK3Q13188 491 aa16.7■□□□□ 0.26
SDCCAG3-209ENST00000468963 ADAM15Q13444 863 aa16.7■□□□□ 0.26
SDCCAG3-209ENST00000468963 EP400NLQ6ZTU2 488 aa16.7■□□□□ 0.26
SDCCAG3-209ENST00000468963 ZNF710Q8N1W2 664 aa16.7■□□□□ 0.26
SDCCAG3-209ENST00000468963 LRRC71Q8N4P6 559 aa16.7■□□□□ 0.26
SDCCAG3-209ENST00000468963 RDM1Q8NG50 284 aa16.7■□□□□ 0.26
SDCCAG3-209ENST00000468963 CEP89Q96ST8 783 aa16.7■□□□□ 0.26
SDCCAG3-209ENST00000468963 LRFN3Q9BTN0 628 aa16.7■□□□□ 0.26
SDCCAG3-209ENST00000468963 NIFKQ9BYG3 293 aaKnown RBP16.7■□□□□ 0.26
SDCCAG3-209ENST00000468963 ELAC1Q9H777 363 aaKnown RBP16.7■□□□□ 0.26
SDCCAG3-209ENST00000468963 RNF216Q9NWF9 866 aaPredicted RBP16.7■□□□□ 0.26
SDCCAG3-209ENST00000468963 EIF4BP23588 611 aaKnown RBP16.69■□□□□ 0.26
SDCCAG3-209ENST00000468963 IRS1P35568 1242 aa16.69■□□□□ 0.26
SDCCAG3-209ENST00000468963 JAK3P52333 1124 aa16.69■□□□□ 0.26
SDCCAG3-209ENST00000468963 PRKCEQ02156 737 aa16.69■□□□□ 0.26
SDCCAG3-209ENST00000468963 CPLX2Q6PUV4 134 aaKnown RBP16.69■□□□□ 0.26
SDCCAG3-209ENST00000468963 MOXD1Q6UVY6 613 aa16.69■□□□□ 0.26
SDCCAG3-209ENST00000468963 ETNPPLQ8TBG4 499 aa16.69■□□□□ 0.26
SDCCAG3-209ENST00000468963 POF1BQ8WVV4 589 aa16.69■□□□□ 0.26
SDCCAG3-209ENST00000468963 C11orf16Q9NQ32 467 aa16.69■□□□□ 0.26
SDCCAG3-209ENST00000468963 TMEM161AQ9NX61 479 aa16.69■□□□□ 0.26
SDCCAG3-209ENST00000468963 TRIOO75962 3097 aa16.69■□□□□ 0.26
SDCCAG3-209ENST00000468963 FNDC1Q4ZHG4 1894 aaPredicted RBP16.68■□□□□ 0.26
SDCCAG3-209ENST00000468963 TBKBP1A7MCY6 615 aa16.68■□□□□ 0.26
SDCCAG3-209ENST00000468963 CHMP2AO43633 222 aa16.68■□□□□ 0.26
SDCCAG3-209ENST00000468963 GPR37L1O60883 481 aa16.68■□□□□ 0.26
SDCCAG3-209ENST00000468963 IBSPP21815 317 aaPredicted RBP16.68■□□□□ 0.26
SDCCAG3-209ENST00000468963 SCRN1Q12765 414 aa16.68■□□□□ 0.26
SDCCAG3-209ENST00000468963 MIER3Q7Z3K6 550 aa16.68■□□□□ 0.26
SDCCAG3-209ENST00000468963 MAP7D2Q96T17 732 aa16.68■□□□□ 0.26
SDCCAG3-209ENST00000468963 IGFLR1Q9H665 355 aa16.68■□□□□ 0.26
SDCCAG3-209ENST00000468963 CWH43Q9H720 699 aa16.68■□□□□ 0.26
SDCCAG3-209ENST00000468963 TYW1Q9NV66 732 aaKnown RBP16.68■□□□□ 0.26
SDCCAG3-209ENST00000468963 KCNJ14Q9UNX9 436 aa16.68■□□□□ 0.26
SDCCAG3-209ENST00000468963 AKT3Q9Y243 479 aa16.68■□□□□ 0.26
SDCCAG3-209ENST00000468963 IGKV6-21A0A0C4DH24 114 aa16.67■□□□□ 0.26
SDCCAG3-209ENST00000468963 C19orf67A6NJJ6 358 aa16.67■□□□□ 0.26
SDCCAG3-209ENST00000468963 LINC01565O15544 149 aa16.67■□□□□ 0.26
SDCCAG3-209ENST00000468963 GPC3P51654 580 aa16.67■□□□□ 0.26
SDCCAG3-209ENST00000468963 NONOQ15233 471 aaKnown RBP eCLIP16.67■□□□□ 0.26
SDCCAG3-209ENST00000468963 XKR3Q5GH77 459 aa16.67■□□□□ 0.26
SDCCAG3-209ENST00000468963 ADGRD2Q7Z7M1 963 aa16.67■□□□□ 0.26
SDCCAG3-209ENST00000468963 ZNF668Q96K58 619 aaPredicted RBP16.67■□□□□ 0.26
SDCCAG3-209ENST00000468963 PHF20Q9BVI0 1012 aa16.67■□□□□ 0.26
SDCCAG3-209ENST00000468963 ATP6V0A4Q9HBG4 840 aa16.67■□□□□ 0.26
SDCCAG3-209ENST00000468963 RNF19AQ9NV58 838 aa16.67■□□□□ 0.26
SDCCAG3-209ENST00000468963 PRKAG3Q9UGI9 489 aa16.67■□□□□ 0.26
SDCCAG3-209ENST00000468963 TPCN1Q9ULQ1 816 aa16.67■□□□□ 0.26
SDCCAG3-209ENST00000468963 FAM50BQ9Y247 325 aa16.67■□□□□ 0.26
SDCCAG3-209ENST00000468963 PCDHB12Q9Y5F1 795 aa16.67■□□□□ 0.26
SDCCAG3-209ENST00000468963 KIAA1671Q9BY89 1806 aa16.67■□□□□ 0.26
SDCCAG3-209ENST00000468963 MBTPS2O43462 519 aa16.66■□□□□ 0.26
SDCCAG3-209ENST00000468963 PFKFB2O60825 505 aa16.66■□□□□ 0.26
SDCCAG3-209ENST00000468963 TBX10O75333 385 aa16.66■□□□□ 0.26
SDCCAG3-209ENST00000468963 CSPG5O95196 566 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms