RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 PLAGL2Q9UPG8 496 aa4.6□□□□□ -1.67
HMGB1P25-201ENST00000468402 OAS3Q9Y6K5 1087 aaKnown RBP4.6□□□□□ -1.67
HMGB1P25-201ENST00000468402 A0A1W2PQ45 241 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P25-201ENST00000468402 A0A1W2PQY0 241 aa4.59□□□□□ -1.67
HMGB1P25-201ENST00000468402 UBA6A0AVT1 1052 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P25-201ENST00000468402 PRSS38A1L453 326 aa4.59□□□□□ -1.67
HMGB1P25-201ENST00000468402 FAM90A27PA6NNH2 459 aa4.59□□□□□ -1.67
HMGB1P25-201ENST00000468402 ZBED1O96006 694 aa4.59□□□□□ -1.67
HMGB1P25-201ENST00000468402 TGFB1P01137 390 aa4.59□□□□□ -1.67
HMGB1P25-201ENST00000468402 HALP42357 657 aa4.59□□□□□ -1.67
HMGB1P25-201ENST00000468402 MTNR1BP49286 362 aa4.59□□□□□ -1.67
HMGB1P25-201ENST00000468402 GJA9P57773 515 aa4.59□□□□□ -1.67
HMGB1P25-201ENST00000468402 MRPS9P82933 396 aaKnown RBP4.59□□□□□ -1.67
HMGB1P25-201ENST00000468402 ALDH6A1Q02252 535 aaKnown RBP4.59□□□□□ -1.67
HMGB1P25-201ENST00000468402 GRIN1Q05586 938 aa4.59□□□□□ -1.67
HMGB1P25-201ENST00000468402 DUSP4Q13115 394 aa4.59□□□□□ -1.67
HMGB1P25-201ENST00000468402 IFIT5Q13325 482 aaKnown RBP4.59□□□□□ -1.67
HMGB1P25-201ENST00000468402 SLC9A5Q14940 896 aa4.59□□□□□ -1.67
HMGB1P25-201ENST00000468402 PGS1Q32NB8 556 aa4.59□□□□□ -1.67
HMGB1P25-201ENST00000468402 HABP4Q5JVS0 413 aaKnown RBP4.59□□□□□ -1.67
HMGB1P25-201ENST00000468402 CATSPEREQ5SY80 951 aa4.59□□□□□ -1.67
HMGB1P25-201ENST00000468402 PRAMEF9Q5VWM5 478 aa4.59□□□□□ -1.67
HMGB1P25-201ENST00000468402 BICRALQ6AI39 1079 aa4.59□□□□□ -1.67
HMGB1P25-201ENST00000468402 ERAP2Q6P179 960 aa4.59□□□□□ -1.67
HMGB1P25-201ENST00000468402 TOGARAM2Q6ZUX3 1019 aa4.59□□□□□ -1.67
HMGB1P25-201ENST00000468402 MYLK4Q86YV6 388 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P25-201ENST00000468402 RIOX2Q8IUF8 465 aa4.59□□□□□ -1.67
HMGB1P25-201ENST00000468402 DENND1CQ8IV53 801 aa4.59□□□□□ -1.67
HMGB1P25-201ENST00000468402 ASB11Q8WXH4 323 aa4.59□□□□□ -1.67
HMGB1P25-201ENST00000468402 TRIM63Q969Q1 353 aa4.59□□□□□ -1.67
HMGB1P25-201ENST00000468402 MAP6Q96JE9 813 aa4.59□□□□□ -1.67
HMGB1P25-201ENST00000468402 C16orf92Q96LL3 132 aa4.59□□□□□ -1.67
HMGB1P25-201ENST00000468402 ORAI2Q96SN7 254 aa4.59□□□□□ -1.67
HMGB1P25-201ENST00000468402 MYL10Q9BUA6 226 aa4.59□□□□□ -1.67
HMGB1P25-201ENST00000468402 SMOC1Q9H4F8 434 aa4.59□□□□□ -1.67
HMGB1P25-201ENST00000468402 IFT122Q9HBG6 1241 aa4.59□□□□□ -1.67
HMGB1P25-201ENST00000468402 ZNF277Q9NRM2 450 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P25-201ENST00000468402 RTEL1Q9NZ71 1219 aa4.59□□□□□ -1.67
HMGB1P25-201ENST00000468402 IMPACTQ9P2X3 320 aa4.59□□□□□ -1.67
HMGB1P25-201ENST00000468402 MYOTQ9UBF9 498 aa4.59□□□□□ -1.67
HMGB1P25-201ENST00000468402 ANGEL1Q9UNK9 670 aaKnown RBP4.59□□□□□ -1.67
HMGB1P25-201ENST00000468402 PPP2R3BQ9Y5P8 575 aa4.59□□□□□ -1.67
HMGB1P25-201ENST00000468402 TAF6LQ9Y6J9 622 aa4.59□□□□□ -1.67
HMGB1P25-201ENST00000468402 PITPNM2Q9BZ72 1349 aa4.58□□□□□ -1.68
HMGB1P25-201ENST00000468402 PRAMEF22A3QJZ6 481 aa4.58□□□□□ -1.68
HMGB1P25-201ENST00000468402 A6NNZ2 444 aa4.58□□□□□ -1.68
HMGB1P25-201ENST00000468402 FADS2P1A8MWK0 482 aa4.58□□□□□ -1.68
HMGB1P25-201ENST00000468402 NBNO60934 754 aa4.58□□□□□ -1.68
HMGB1P25-201ENST00000468402 USP2O75604 605 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P25-201ENST00000468402 UBXN7O94888 489 aa4.58□□□□□ -1.68
HMGB1P25-201ENST00000468402 PRPF6O94906 941 aaKnown RBP4.58□□□□□ -1.68
HMGB1P25-201ENST00000468402 MMEP08473 750 aa4.58□□□□□ -1.68
HMGB1P25-201ENST00000468402 ZKSCAN1P17029 563 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P25-201ENST00000468402 FNTBP49356 437 aa4.58□□□□□ -1.68
HMGB1P25-201ENST00000468402 MANFP55145 182 aaKnown RBP4.58□□□□□ -1.68
HMGB1P25-201ENST00000468402 LGALS4P56470 323 aa4.58□□□□□ -1.68
HMGB1P25-201ENST00000468402 FAM193AP78312 1265 aa4.58□□□□□ -1.68
HMGB1P25-201ENST00000468402 NFIAQ12857 509 aa4.58□□□□□ -1.68
HMGB1P25-201ENST00000468402 IKZF1Q13422 519 aa4.58□□□□□ -1.68
HMGB1P25-201ENST00000468402 TRIM14Q14142 442 aa4.58□□□□□ -1.68
HMGB1P25-201ENST00000468402 AOC3Q16853 763 aa4.58□□□□□ -1.68
HMGB1P25-201ENST00000468402 PITRM1Q5JRX3 1037 aa4.58□□□□□ -1.68
HMGB1P25-201ENST00000468402 TTC38Q5R3I4 469 aa4.58□□□□□ -1.68
HMGB1P25-201ENST00000468402 RNF220Q5VTB9 566 aa4.58□□□□□ -1.68
HMGB1P25-201ENST00000468402 WDR78Q5VTH9 848 aa4.58□□□□□ -1.68
HMGB1P25-201ENST00000468402 PRAMEF18Q5VWM3 479 aa4.58□□□□□ -1.68
HMGB1P25-201ENST00000468402 MBNL2Q5VZF2 373 aaKnown RBP4.58□□□□□ -1.68
HMGB1P25-201ENST00000468402 XRRA1Q6P2D8 792 aa4.58□□□□□ -1.68
HMGB1P25-201ENST00000468402 OVCH2Q7RTZ1 564 aa4.58□□□□□ -1.68
HMGB1P25-201ENST00000468402 TRIM48Q8IWZ4 208 aa4.58□□□□□ -1.68
HMGB1P25-201ENST00000468402 NUP43Q8NFH3 380 aa4.58□□□□□ -1.68
HMGB1P25-201ENST00000468402 SHKBP1Q8TBC3 707 aa4.58□□□□□ -1.68
HMGB1P25-201ENST00000468402 COA7Q96BR5 231 aa4.58□□□□□ -1.68
HMGB1P25-201ENST00000468402 HHIPL1Q96JK4 782 aa4.58□□□□□ -1.68
HMGB1P25-201ENST00000468402 HRASLS5Q96KN8 279 aa4.58□□□□□ -1.68
HMGB1P25-201ENST00000468402 FMNL2Q96PY5 1086 aa4.58□□□□□ -1.68
HMGB1P25-201ENST00000468402 HERPUD2Q9BSE4 406 aa4.58□□□□□ -1.68
HMGB1P25-201ENST00000468402 MTA3Q9BTC8 594 aa4.58□□□□□ -1.68
HMGB1P25-201ENST00000468402 ACE2Q9BYF1 805 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P25-201ENST00000468402 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P25-201ENST00000468402 AP5M1Q9H0R1 490 aa4.58□□□□□ -1.68
HMGB1P25-201ENST00000468402 KCTD10Q9H3F6 313 aa4.58□□□□□ -1.68
HMGB1P25-201ENST00000468402 PDLIM7Q9NR12 457 aa4.58□□□□□ -1.68
HMGB1P25-201ENST00000468402 SERPINB13Q9UIV8 391 aa4.58□□□□□ -1.68
HMGB1P25-201ENST00000468402 TUBD1Q9UJT1 453 aa4.58□□□□□ -1.68
HMGB1P25-201ENST00000468402 PTPN22Q9Y2R2 807 aa4.58□□□□□ -1.68
HMGB1P25-201ENST00000468402 PCDHB4Q9Y5E5 795 aa4.58□□□□□ -1.68
HMGB1P25-201ENST00000468402 SNX11Q9Y5W9 270 aa4.58□□□□□ -1.68
HMGB1P25-201ENST00000468402 MROH2BQ7Z745 1585 aa4.57□□□□□ -1.68
HMGB1P25-201ENST00000468402 BICRAQ9NZM4 1560 aa4.57□□□□□ -1.68
HMGB1P25-201ENST00000468402 CCDC154A6NI56 674 aa4.57□□□□□ -1.68
HMGB1P25-201ENST00000468402 FAM227AF5H4B4 570 aa4.57□□□□□ -1.68
HMGB1P25-201ENST00000468402 H3BML4 177 aa4.57□□□□□ -1.68
HMGB1P25-201ENST00000468402 MGEA5O60502 916 aa4.57□□□□□ -1.68
HMGB1P25-201ENST00000468402 TUSC2O75896 110 aa4.57□□□□□ -1.68
HMGB1P25-201ENST00000468402 WNT11O96014 354 aa4.57□□□□□ -1.68
HMGB1P25-201ENST00000468402 IGLV1-40P01703 118 aa4.57□□□□□ -1.68
HMGB1P25-201ENST00000468402 C4BPAP04003 597 aaKnown RBP4.57□□□□□ -1.68
HMGB1P25-201ENST00000468402 PRKCAP17252 672 aa4.57□□□□□ -1.68
HMGB1P25-201ENST00000468402 HTR1BP28222 390 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms