RNA–Protein interactions for RNA: ENST00000468380.1

LINC00888-201, long intergenic non-protein coding RNA 888, humanhuman

TSL 2

Gene LINC00888, Length 1,241 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-201ENST00000468380 KIZQ2M2Z5 673 aa21.31■■□□□ 1
LINC00888-201ENST00000468380 ABHD15Q6UXT9 468 aa21.31■■□□□ 1
LINC00888-201ENST00000468380 FAM43BQ6ZT52 329 aaPredicted RBP21.31■■□□□ 1
LINC00888-201ENST00000468380 PGBD1Q96JS3 809 aa21.31■■□□□ 1
LINC00888-201ENST00000468380 OSMRQ99650 979 aa21.31■■□□□ 1
LINC00888-201ENST00000468380 TMEM117Q9H0C3 514 aa21.31■■□□□ 1
LINC00888-201ENST00000468380 ELAC1Q9H777 363 aaKnown RBP21.31■■□□□ 1
LINC00888-201ENST00000468380 RNF216Q9NWF9 866 aaPredicted RBP21.31■■□□□ 1
LINC00888-201ENST00000468380 HCFC2Q9Y5Z7 792 aa21.31■■□□□ 1
LINC00888-201ENST00000468380 GPR32O75388 356 aa21.3■■□□□ 1
LINC00888-201ENST00000468380 ASGR2P07307 311 aa21.3■■□□□ 1
LINC00888-201ENST00000468380 CHMLP26374 656 aa21.3■■□□□ 1
LINC00888-201ENST00000468380 CRYBB1P53674 252 aaPredicted RBP21.3■■□□□ 1
LINC00888-201ENST00000468380 KANK3Q6NY19 840 aa21.3■■□□□ 1
LINC00888-201ENST00000468380 TMC7Q7Z402 723 aa21.3■■□□□ 1
LINC00888-201ENST00000468380 RAB11FIP4Q86YS3 637 aa21.3■■□□□ 1
LINC00888-201ENST00000468380 MRPL43Q8N983 215 aaKnown RBP21.3■■□□□ 1
LINC00888-201ENST00000468380 CASP10Q92851 521 aa21.3■■□□□ 1
LINC00888-201ENST00000468380 MEIS1O00470 390 aa21.29■■□□□ 1
LINC00888-201ENST00000468380 SLC26A2P50443 739 aa21.29■■□□□ 1
LINC00888-201ENST00000468380 CEP55Q53EZ4 464 aa21.29■■□□□ 1
LINC00888-201ENST00000468380 ASTLQ6HA08 431 aaPredicted RBP21.29■■□□□ 1
LINC00888-201ENST00000468380 FRMD5Q7Z6J6 570 aa21.29■■□□□ 1
LINC00888-201ENST00000468380 CCDC60Q8IWA6 550 aaPredicted RBP21.29■■□□□ 1
LINC00888-201ENST00000468380 FEZF2Q8TBJ5 459 aa21.29■■□□□ 1
LINC00888-201ENST00000468380 LIMD1Q9UGP4 676 aa21.29■■□□□ 1
LINC00888-201ENST00000468380 GVINP1Q7Z2Y8 2422 aa21.28■■□□□ 1
LINC00888-201ENST00000468380 C2orf71A6NGG8 1288 aa21.28■■□□□ 1
LINC00888-201ENST00000468380 DDX39AO00148 427 aaKnown RBP21.28■■□□□ 1
LINC00888-201ENST00000468380 PRC1O43663 620 aa21.28■■□□□ 1
LINC00888-201ENST00000468380 CLASP2O75122 1294 aaKnown RBP21.28■■□□□ 1
LINC00888-201ENST00000468380 VTNP04004 478 aa21.28■■□□□ 1
LINC00888-201ENST00000468380 TPRNQ4KMQ1 711 aa21.28■■□□□ 1
LINC00888-201ENST00000468380 ZNF484Q5JVG2 852 aa21.28■■□□□ 1
LINC00888-201ENST00000468380 ODR4Q5SWX8 454 aa21.28■■□□□ 1
LINC00888-201ENST00000468380 TTC22Q5TAA0 569 aa21.28■■□□□ 1
LINC00888-201ENST00000468380 TYW1BQ6NUM6 668 aa21.28■■□□□ 1
LINC00888-201ENST00000468380 HEATR3Q7Z4Q2 680 aa21.28■■□□□ 1
LINC00888-201ENST00000468380 C12orf76Q8N812 135 aaPredicted RBP21.28■■□□□ 1
LINC00888-201ENST00000468380 ZNF558Q96NG5 402 aa21.28■■□□□ 1
LINC00888-201ENST00000468380 NECTIN4Q96NY8 510 aa21.28■■□□□ 1
LINC00888-201ENST00000468380 SPG21Q9NZD8 308 aa21.28■■□□□ 1
LINC00888-201ENST00000468380 SH2B2O14492 632 aaPredicted RBP21.27■■□□□ 1
LINC00888-201ENST00000468380 BACH1O14867 736 aa21.27■■□□□ 1
LINC00888-201ENST00000468380 C22orf31O95567 290 aa21.27■■□□□ 1
LINC00888-201ENST00000468380 KRT17Q04695 432 aa21.27■■□□□ 1
LINC00888-201ENST00000468380 ITIH3Q06033 890 aa21.27■■□□□ 1
LINC00888-201ENST00000468380 AAMPQ13685 434 aa21.27■■□□□ 1
LINC00888-201ENST00000468380 CES5AQ6NT32 575 aa21.27■■□□□ 1
LINC00888-201ENST00000468380 NFXL1Q6ZNB6 911 aa21.27■■□□□ 1
LINC00888-201ENST00000468380 RUFY2Q8WXA3 655 aa21.27■■□□□ 1
LINC00888-201ENST00000468380 MAP4K1Q92918 833 aa21.27■■□□□ 1
LINC00888-201ENST00000468380 WDR87Q6ZQQ6 2873 aa21.26■□□□□ 0.99
LINC00888-201ENST00000468380 COL1A2P08123 1366 aa21.26■□□□□ 0.99
LINC00888-201ENST00000468380 DHX15O43143 795 aaKnown RBP21.26■□□□□ 0.99
LINC00888-201ENST00000468380 SGSM2O43147 1006 aa21.26■□□□□ 0.99
LINC00888-201ENST00000468380 WWC2Q6AWC2 1192 aa21.26■□□□□ 0.99
LINC00888-201ENST00000468380 SWSAP1Q6NVH7 229 aa21.26■□□□□ 0.99
LINC00888-201ENST00000468380 PDXDC2PQ6P474 469 aa21.26■□□□□ 0.99
LINC00888-201ENST00000468380 CASC1Q6TDU7 716 aa21.26■□□□□ 0.99
LINC00888-201ENST00000468380 TMTC3Q6ZXV5 915 aa21.26■□□□□ 0.99
LINC00888-201ENST00000468380 SLC39A11Q8N1S5 342 aa21.26■□□□□ 0.99
LINC00888-201ENST00000468380 MTA3Q9BTC8 594 aa21.26■□□□□ 0.99
LINC00888-201ENST00000468380 ZNF302Q9NR11 478 aa21.26■□□□□ 0.99
LINC00888-201ENST00000468380 CCDC69A6NI79 296 aa21.25■□□□□ 0.99
LINC00888-201ENST00000468380 PI15O43692 258 aa21.25■□□□□ 0.99
LINC00888-201ENST00000468380 PPM1AP35813 382 aa21.25■□□□□ 0.99
LINC00888-201ENST00000468380 CLCN5P51795 746 aa21.25■□□□□ 0.99
LINC00888-201ENST00000468380 SMC1AQ14683 1233 aaKnown RBP21.25■□□□□ 0.99
LINC00888-201ENST00000468380 CLLU1OSQ5K130 101 aa21.25■□□□□ 0.99
LINC00888-201ENST00000468380 RARS2Q5T160 578 aaKnown RBP21.25■□□□□ 0.99
LINC00888-201ENST00000468380 FAM160B1Q5W0V3 765 aa21.25■□□□□ 0.99
LINC00888-201ENST00000468380 ECHDC2Q86YB7 292 aa21.25■□□□□ 0.99
LINC00888-201ENST00000468380 ZDHHC14Q8IZN3 488 aa21.25■□□□□ 0.99
LINC00888-201ENST00000468380 TMTC2Q8N394 836 aa21.25■□□□□ 0.99
LINC00888-201ENST00000468380 FANCBQ8NB91 859 aa21.25■□□□□ 0.99
LINC00888-201ENST00000468380 NKD2Q969F2 451 aaPredicted RBP21.25■□□□□ 0.99
LINC00888-201ENST00000468380 ANO3Q9BYT9 981 aa21.25■□□□□ 0.99
LINC00888-201ENST00000468380 RIC8AQ9NPQ8 531 aa21.25■□□□□ 0.99
LINC00888-201ENST00000468380 RBM8AQ9Y5S9 174 aaKnown RBP21.25■□□□□ 0.99
LINC00888-201ENST00000468380 NT5C1B-RDH14C9J2C7 533 aa21.24■□□□□ 0.99
LINC00888-201ENST00000468380 MTHFRP42898 656 aa21.24■□□□□ 0.99
LINC00888-201ENST00000468380 TRMT1LQ7Z2T5 733 aaKnown RBP21.24■□□□□ 0.99
LINC00888-201ENST00000468380 ADSSL1Q8N142 457 aa21.24■□□□□ 0.99
LINC00888-201ENST00000468380 LRRC43Q8N309 656 aa21.24■□□□□ 0.99
LINC00888-201ENST00000468380 METTL13Q8N6R0 699 aa21.24■□□□□ 0.99
LINC00888-201ENST00000468380 ADAMTS10Q9H324 1103 aa21.24■□□□□ 0.99
LINC00888-201ENST00000468380 HOXA2O43364 376 aa21.23■□□□□ 0.99
LINC00888-201ENST00000468380 CXCL14O95715 111 aa21.23■□□□□ 0.99
LINC00888-201ENST00000468380 NPR3P17342 541 aa21.23■□□□□ 0.99
LINC00888-201ENST00000468380 LIFRP42702 1097 aa21.23■□□□□ 0.99
LINC00888-201ENST00000468380 NLRP11P59045 1033 aaKnown RBP21.23■□□□□ 0.99
LINC00888-201ENST00000468380 CWF19L1Q69YN2 538 aaKnown RBP21.23■□□□□ 0.99
LINC00888-201ENST00000468380 ERMP1Q7Z2K6 904 aa21.23■□□□□ 0.99
LINC00888-201ENST00000468380 TMEM87BQ96K49 555 aa21.23■□□□□ 0.99
LINC00888-201ENST00000468380 LRRC2Q9BYS8 371 aa21.23■□□□□ 0.99
LINC00888-201ENST00000468380 FAM86B1E9PN63 330 aa21.22■□□□□ 0.99
LINC00888-201ENST00000468380 FOSP01100 380 aaPredicted RBP21.22■□□□□ 0.99
LINC00888-201ENST00000468380 FAM86B2P0C5J1 330 aa21.22■□□□□ 0.99
LINC00888-201ENST00000468380 CALM1P0DP23 149 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms