RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 ARHGAP1Q07960 439 aa9.13□□□□□ -0.95
BRCA1-208ENST00000468300 KCNJ12Q14500 433 aa9.13□□□□□ -0.95
BRCA1-208ENST00000468300 TAF1CQ15572 869 aaPredicted RBP9.13□□□□□ -0.95
BRCA1-208ENST00000468300 TARBP2Q15633 366 aaKnown RBP9.13□□□□□ -0.95
BRCA1-208ENST00000468300 ZC2HC1CQ53FD0 456 aaPredicted RBP9.13□□□□□ -0.95
BRCA1-208ENST00000468300 GJC2Q5T442 439 aaPredicted RBP9.13□□□□□ -0.95
BRCA1-208ENST00000468300 ZNF720Q7Z2F6 126 aa9.13□□□□□ -0.95
BRCA1-208ENST00000468300 KSR1Q8IVT5 923 aa9.13□□□□□ -0.95
BRCA1-208ENST00000468300 VSTM4Q8IW00 320 aa9.13□□□□□ -0.95
BRCA1-208ENST00000468300 MYOCDQ8IZQ8 938 aa9.13□□□□□ -0.95
BRCA1-208ENST00000468300 CCDC102AQ96A19 550 aa9.13□□□□□ -0.95
BRCA1-208ENST00000468300 BMP2KQ9NSY1 1161 aaPredicted RBP9.13□□□□□ -0.95
BRCA1-208ENST00000468300 THSD7BQ9C0I4 1608 aa9.13□□□□□ -0.95
BRCA1-208ENST00000468300 ARHGEF35A5YM69 484 aa9.13□□□□□ -0.95
BRCA1-208ENST00000468300 ASB14A6NK59 587 aa9.13□□□□□ -0.95
BRCA1-208ENST00000468300 SOX10P56693 466 aa9.13□□□□□ -0.95
BRCA1-208ENST00000468300 NEDD9Q14511 834 aa9.13□□□□□ -0.95
BRCA1-208ENST00000468300 MIS18BP1Q6P0N0 1132 aa9.13□□□□□ -0.95
BRCA1-208ENST00000468300 DNAJC14Q6Y2X3 702 aaPredicted RBP9.13□□□□□ -0.95
BRCA1-208ENST00000468300 BSNDQ8WZ55 320 aa9.13□□□□□ -0.95
BRCA1-208ENST00000468300 NIFKQ9BYG3 293 aaKnown RBP9.13□□□□□ -0.95
BRCA1-208ENST00000468300 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.13□□□□□ -0.95
BRCA1-208ENST00000468300 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.13□□□□□ -0.95
BRCA1-208ENST00000468300 PRPF6O94906 941 aaKnown RBP9.13□□□□□ -0.95
BRCA1-208ENST00000468300 PPP1R2P41236 205 aa9.13□□□□□ -0.95
BRCA1-208ENST00000468300 CEP135Q66GS9 1140 aa9.13□□□□□ -0.95
BRCA1-208ENST00000468300 PARVGQ9HBI0 331 aa9.13□□□□□ -0.95
BRCA1-208ENST00000468300 ABT1Q9ULW3 272 aaKnown RBP9.13□□□□□ -0.95
BRCA1-208ENST00000468300 TRAF3IP3Q9Y228 551 aa9.13□□□□□ -0.95
BRCA1-208ENST00000468300 COL4A3BPQ9Y5P4 624 aa9.13□□□□□ -0.95
BRCA1-208ENST00000468300 DNAH12Q6ZR08 3092 aa9.12□□□□□ -0.95
BRCA1-208ENST00000468300 RASSF10A6NK89 507 aa9.12□□□□□ -0.95
BRCA1-208ENST00000468300 AOC2O75106 756 aa9.12□□□□□ -0.95
BRCA1-208ENST00000468300 SERPINC1P01008 464 aa9.12□□□□□ -0.95
BRCA1-208ENST00000468300 HOXC6P09630 235 aa9.12□□□□□ -0.95
BRCA1-208ENST00000468300 GAP43P17677 238 aa9.12□□□□□ -0.95
BRCA1-208ENST00000468300 TCF7P36402 384 aaPredicted RBP9.12□□□□□ -0.95
BRCA1-208ENST00000468300 LRRC63Q05C16 580 aa9.12□□□□□ -0.95
BRCA1-208ENST00000468300 CCDC181Q5TID7 509 aa9.12□□□□□ -0.95
BRCA1-208ENST00000468300 ARMCX5Q6P1M9 558 aa9.12□□□□□ -0.95
BRCA1-208ENST00000468300 KCNV1Q6PIU1 500 aa9.12□□□□□ -0.95
BRCA1-208ENST00000468300 CCDC186Q7Z3E2 898 aa9.12□□□□□ -0.95
BRCA1-208ENST00000468300 NELFCDQ8IXH7 590 aa9.12□□□□□ -0.95
BRCA1-208ENST00000468300 CSGALNACT2Q8N6G5 542 aa9.12□□□□□ -0.95
BRCA1-208ENST00000468300 CCDC47Q96A33 483 aaKnown RBP9.12□□□□□ -0.95
BRCA1-208ENST00000468300 ZNF302Q9NR11 478 aa9.12□□□□□ -0.95
BRCA1-208ENST00000468300 CYP26B1Q9NR63 512 aa9.12□□□□□ -0.95
BRCA1-208ENST00000468300 BICDL2A1A5D9 508 aa9.12□□□□□ -0.95
BRCA1-208ENST00000468300 RIOK3O14730 519 aaKnown RBP9.12□□□□□ -0.95
BRCA1-208ENST00000468300 USO1O60763 962 aaKnown RBP9.12□□□□□ -0.95
BRCA1-208ENST00000468300 KRT18P05783 430 aaKnown RBP9.12□□□□□ -0.95
BRCA1-208ENST00000468300 ADCYAP1R1P41586 468 aa9.12□□□□□ -0.95
BRCA1-208ENST00000468300 TPM4P67936 248 aa9.12□□□□□ -0.95
BRCA1-208ENST00000468300 STIM1Q13586 685 aa9.12□□□□□ -0.95
BRCA1-208ENST00000468300 CCL14Q16627 93 aa9.12□□□□□ -0.95
BRCA1-208ENST00000468300 MAEAQ7L5Y9 396 aa9.12□□□□□ -0.95
BRCA1-208ENST00000468300 TRMT1LQ7Z2T5 733 aaKnown RBP9.12□□□□□ -0.95
BRCA1-208ENST00000468300 CACTINQ8WUQ7 758 aaKnown RBP9.12□□□□□ -0.95
BRCA1-208ENST00000468300 ATP6V0A1Q93050 837 aa9.12□□□□□ -0.95
BRCA1-208ENST00000468300 EMID1Q96A84 441 aaPredicted RBP9.12□□□□□ -0.95
BRCA1-208ENST00000468300 TRIM47Q96LD4 638 aa9.12□□□□□ -0.95
BRCA1-208ENST00000468300 ARHGAP39Q9C0H5 1083 aa9.12□□□□□ -0.95
BRCA1-208ENST00000468300 VTA1Q9NP79 307 aa9.12□□□□□ -0.95
BRCA1-208ENST00000468300 ADGRA3Q8IWK6 1321 aa9.11□□□□□ -0.95
BRCA1-208ENST00000468300 EIF3DO15371 548 aaKnown RBP eCLIP9.11□□□□□ -0.95
BRCA1-208ENST00000468300 OATP04181 439 aa9.11□□□□□ -0.95
BRCA1-208ENST00000468300 TXNP10599 105 aaKnown RBP9.11□□□□□ -0.95
BRCA1-208ENST00000468300 SMPD1P17405 629 aa9.11□□□□□ -0.95
BRCA1-208ENST00000468300 COPB1P53618 953 aaKnown RBP9.11□□□□□ -0.95
BRCA1-208ENST00000468300 NCKAP1LP55160 1127 aa9.11□□□□□ -0.95
BRCA1-208ENST00000468300 LRMPQ12912 555 aa9.11□□□□□ -0.95
BRCA1-208ENST00000468300 KNOP1Q1ED39 458 aaKnown RBP9.11□□□□□ -0.95
BRCA1-208ENST00000468300 XKR9Q5GH70 373 aa9.11□□□□□ -0.95
BRCA1-208ENST00000468300 TRIM50Q86XT4 487 aa9.11□□□□□ -0.95
BRCA1-208ENST00000468300 MYCT1Q8N699 235 aa9.11□□□□□ -0.95
BRCA1-208ENST00000468300 SEPT1Q8WYJ6 367 aa9.11□□□□□ -0.95
BRCA1-208ENST00000468300 TINF2Q9BSI4 451 aa9.11□□□□□ -0.95
BRCA1-208ENST00000468300 DHX33Q9H6R0 707 aaKnown RBP9.11□□□□□ -0.95
BRCA1-208ENST00000468300 MRPL44Q9H9J2 332 aaKnown RBP9.11□□□□□ -0.95
BRCA1-208ENST00000468300 TAB2Q9NYJ8 693 aa9.11□□□□□ -0.95
BRCA1-208ENST00000468300 SEL1LQ9UBV2 794 aa9.11□□□□□ -0.95
BRCA1-208ENST00000468300 EMSYQ7Z589 1322 aa9.11□□□□□ -0.95
BRCA1-208ENST00000468300 GOLGA6CA6NDK9 693 aa9.11□□□□□ -0.95
BRCA1-208ENST00000468300 GOLGA6BA6NDN3 693 aa9.11□□□□□ -0.95
BRCA1-208ENST00000468300 RNF225M0QZC1 329 aaPredicted RBP9.11□□□□□ -0.95
BRCA1-208ENST00000468300 CA12O43570 354 aa9.11□□□□□ -0.95
BRCA1-208ENST00000468300 GOLGA6DP0CG33 693 aa9.11□□□□□ -0.95
BRCA1-208ENST00000468300 PLS3P13797 630 aa9.11□□□□□ -0.95
BRCA1-208ENST00000468300 EEF1GP26641 437 aaKnown RBP9.11□□□□□ -0.95
BRCA1-208ENST00000468300 MAP2K5Q13163 448 aa9.11□□□□□ -0.95
BRCA1-208ENST00000468300 XKR3Q5GH77 459 aa9.11□□□□□ -0.95
BRCA1-208ENST00000468300 MICAL1Q8TDZ2 1067 aa9.11□□□□□ -0.95
BRCA1-208ENST00000468300 BORCS6Q96GS4 357 aa9.11□□□□□ -0.95
BRCA1-208ENST00000468300 ST6GALNAC4Q9H4F1 302 aa9.11□□□□□ -0.95
BRCA1-208ENST00000468300 ZHX3Q9H4I2 956 aa9.11□□□□□ -0.95
BRCA1-208ENST00000468300 GOLGA6AQ9NYA3 693 aa9.11□□□□□ -0.95
BRCA1-208ENST00000468300 B4DLN1 442 aa9.11□□□□□ -0.95
BRCA1-208ENST00000468300 TBCAO75347 108 aaKnown RBP9.11□□□□□ -0.95
BRCA1-208ENST00000468300 ZNF865P0CJ78 1059 aaPredicted RBP9.11□□□□□ -0.95
BRCA1-208ENST00000468300 HOXD8P13378 290 aaPredicted RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms