RNA–Protein interactions for RNA: ENST00000467514.1

PRPF3-203, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 3

Gene PRPF3, Length 1,097 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-203ENST00000467514 SMIM10L2AP0DMW4 78 aa12.4□□□□□ -0.42
PRPF3-203ENST00000467514 SMIM10L2BP0DMW5 78 aa12.4□□□□□ -0.42
PRPF3-203ENST00000467514 BMPR1AP36894 532 aa12.4□□□□□ -0.42
PRPF3-203ENST00000467514 ADCY7P51828 1080 aa12.4□□□□□ -0.42
PRPF3-203ENST00000467514 GSE1Q14687 1217 aa12.4□□□□□ -0.42
PRPF3-203ENST00000467514 CTC1Q2NKJ3 1217 aa12.4□□□□□ -0.42
PRPF3-203ENST00000467514 ZSCAN23Q3MJ62 389 aa12.4□□□□□ -0.42
PRPF3-203ENST00000467514 TTC38Q5R3I4 469 aa12.4□□□□□ -0.42
PRPF3-203ENST00000467514 KCNV1Q6PIU1 500 aa12.4□□□□□ -0.42
PRPF3-203ENST00000467514 REXO1Q8N1G1 1221 aaKnown RBP12.4□□□□□ -0.42
PRPF3-203ENST00000467514 C4orf32Q8N8J7 132 aa12.4□□□□□ -0.42
PRPF3-203ENST00000467514 TBC1D5Q92609 795 aa12.4□□□□□ -0.42
PRPF3-203ENST00000467514 RPGRIP1Q96KN7 1286 aa12.4□□□□□ -0.42
PRPF3-203ENST00000467514 AMNQ9BXJ7 453 aa12.4□□□□□ -0.42
PRPF3-203ENST00000467514 ALG13Q9NP73 1137 aaKnown RBP12.4□□□□□ -0.42
PRPF3-203ENST00000467514 PXMP2Q9NR77 195 aa12.4□□□□□ -0.42
PRPF3-203ENST00000467514 PCDHA1Q9Y5I3 950 aa12.4□□□□□ -0.42
PRPF3-203ENST00000467514 KAT6AQ92794 2004 aa12.4□□□□□ -0.42
PRPF3-203ENST00000467514 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.39□□□□□ -0.43
PRPF3-203ENST00000467514 H3BRB1 525 aa12.39□□□□□ -0.43
PRPF3-203ENST00000467514 TREHO43280 583 aa12.39□□□□□ -0.43
PRPF3-203ENST00000467514 CAND2O75155 1236 aa12.39□□□□□ -0.43
PRPF3-203ENST00000467514 CMA1P23946 247 aa12.39□□□□□ -0.43
PRPF3-203ENST00000467514 MARCKSP29966 332 aaPredicted RBP12.39□□□□□ -0.43
PRPF3-203ENST00000467514 ATP2C1P98194 919 aaPredicted RBP12.39□□□□□ -0.43
PRPF3-203ENST00000467514 SIGLEC14Q08ET2 396 aa12.39□□□□□ -0.43
PRPF3-203ENST00000467514 SNW1Q13573 536 aaKnown RBP12.39□□□□□ -0.43
PRPF3-203ENST00000467514 HSDL1Q3SXM5 330 aa12.39□□□□□ -0.43
PRPF3-203ENST00000467514 CELF3Q5SZQ8 465 aaKnown RBP12.39□□□□□ -0.43
PRPF3-203ENST00000467514 CCDC183Q5T5S1 534 aa12.39□□□□□ -0.43
PRPF3-203ENST00000467514 SHC4Q6S5L8 630 aa12.39□□□□□ -0.43
PRPF3-203ENST00000467514 ZNF579Q8NAF0 562 aaKnown RBP12.39□□□□□ -0.43
PRPF3-203ENST00000467514 MRPS27Q92552 414 aaKnown RBP12.39□□□□□ -0.43
PRPF3-203ENST00000467514 GLT8D2Q9H1C3 349 aa12.39□□□□□ -0.43
PRPF3-203ENST00000467514 TUT1Q9H6E5 874 aaKnown RBP12.39□□□□□ -0.43
PRPF3-203ENST00000467514 TMEM260Q9NX78 707 aa12.39□□□□□ -0.43
PRPF3-203ENST00000467514 COL20A1Q9P218 1284 aa12.39□□□□□ -0.43
PRPF3-203ENST00000467514 CEP131Q9UPN4 1083 aa12.39□□□□□ -0.43
PRPF3-203ENST00000467514 HPSEQ9Y251 543 aa12.39□□□□□ -0.43
PRPF3-203ENST00000467514 SRPRBQ9Y5M8 271 aaKnown RBP12.39□□□□□ -0.43
PRPF3-203ENST00000467514 CCDC194A0A1B0GVG4 234 aa12.38□□□□□ -0.43
PRPF3-203ENST00000467514 FSD2A1L4K1 749 aa12.38□□□□□ -0.43
PRPF3-203ENST00000467514 GOLGA6L4A6NEF3 574 aa12.38□□□□□ -0.43
PRPF3-203ENST00000467514 C5orf67F2Z3F1 127 aa12.38□□□□□ -0.43
PRPF3-203ENST00000467514 H0Y858 1186 aa12.38□□□□□ -0.43
PRPF3-203ENST00000467514 MEIS2O14770 477 aa12.38□□□□□ -0.43
PRPF3-203ENST00000467514 NR1I2O75469 434 aa12.38□□□□□ -0.43
PRPF3-203ENST00000467514 GHRP10912 638 aa12.38□□□□□ -0.43
PRPF3-203ENST00000467514 IBSPP21815 317 aaPredicted RBP12.38□□□□□ -0.43
PRPF3-203ENST00000467514 NRIP1P48552 1158 aa12.38□□□□□ -0.43
PRPF3-203ENST00000467514 VCPP55072 806 aaKnown RBP12.38□□□□□ -0.43
PRPF3-203ENST00000467514 ARHGAP4P98171 946 aa12.38□□□□□ -0.43
PRPF3-203ENST00000467514 FAM160A1Q05DH4 1040 aa12.38□□□□□ -0.43
PRPF3-203ENST00000467514 TRAF1Q13077 416 aa12.38□□□□□ -0.43
PRPF3-203ENST00000467514 HIC1Q14526 733 aa12.38□□□□□ -0.43
PRPF3-203ENST00000467514 NONOQ15233 471 aaKnown RBP eCLIP12.38□□□□□ -0.43
PRPF3-203ENST00000467514 INF2Q27J81 1249 aa12.38□□□□□ -0.43
PRPF3-203ENST00000467514 RESP18Q5W5W9 173 aa12.38□□□□□ -0.43
PRPF3-203ENST00000467514 RBM43Q6ZSC3 357 aaKnown RBP12.38□□□□□ -0.43
PRPF3-203ENST00000467514 RBM23Q86U06 439 aaKnown RBP12.38□□□□□ -0.43
PRPF3-203ENST00000467514 FMR1NBQ8N0W7 255 aaPredicted RBP12.38□□□□□ -0.43
PRPF3-203ENST00000467514 KRI1Q8N9T8 703 aaKnown RBP12.38□□□□□ -0.43
PRPF3-203ENST00000467514 FSIP1Q8NA03 581 aa12.38□□□□□ -0.43
PRPF3-203ENST00000467514 CUL5Q93034 780 aa12.38□□□□□ -0.43
PRPF3-203ENST00000467514 SYAP1Q96A49 352 aaPredicted RBP12.38□□□□□ -0.43
PRPF3-203ENST00000467514 CLSTN2Q9H4D0 955 aa12.38□□□□□ -0.43
PRPF3-203ENST00000467514 PSTPIP2Q9H939 334 aa12.38□□□□□ -0.43
PRPF3-203ENST00000467514 TLR9Q9NR96 1032 aa12.38□□□□□ -0.43
PRPF3-203ENST00000467514 DDX19AQ9NUU7 478 aaKnown RBP12.38□□□□□ -0.43
PRPF3-203ENST00000467514 DACT1Q9NYF0 836 aa12.38□□□□□ -0.43
PRPF3-203ENST00000467514 ZNF215Q9UL58 517 aaPredicted RBP12.38□□□□□ -0.43
PRPF3-203ENST00000467514 PIK3CDO00329 1044 aa12.37□□□□□ -0.43
PRPF3-203ENST00000467514 LGALS2P05162 132 aa12.37□□□□□ -0.43
PRPF3-203ENST00000467514 ATP2B1P20020 1258 aa12.37□□□□□ -0.43
PRPF3-203ENST00000467514 UBA1P22314 1058 aaKnown RBP12.37□□□□□ -0.43
PRPF3-203ENST00000467514 GHRHRQ02643 423 aa12.37□□□□□ -0.43
PRPF3-203ENST00000467514 GRIN1Q05586 938 aa12.37□□□□□ -0.43
PRPF3-203ENST00000467514 ORC2Q13416 577 aaPredicted RBP12.37□□□□□ -0.43
PRPF3-203ENST00000467514 ADAM15Q13444 863 aa12.37□□□□□ -0.43
PRPF3-203ENST00000467514 ZNF174Q15697 407 aa12.37□□□□□ -0.43
PRPF3-203ENST00000467514 SPOUT1Q5T280 376 aaKnown RBP12.37□□□□□ -0.43
PRPF3-203ENST00000467514 JAKMIP3Q5VZ66 844 aa12.37□□□□□ -0.43
PRPF3-203ENST00000467514 RSPH3Q86UC2 560 aa12.37□□□□□ -0.43
PRPF3-203ENST00000467514 GAS2L3Q86XJ1 694 aa12.37□□□□□ -0.43
PRPF3-203ENST00000467514 MICAL1Q8TDZ2 1067 aa12.37□□□□□ -0.43
PRPF3-203ENST00000467514 CRYGNQ8WXF5 182 aa12.37□□□□□ -0.43
PRPF3-203ENST00000467514 CLIC6Q96NY7 704 aa12.37□□□□□ -0.43
PRPF3-203ENST00000467514 PLVAPQ9BX97 442 aa12.37□□□□□ -0.43
PRPF3-203ENST00000467514 MAF1Q9H063 256 aa12.37□□□□□ -0.43
PRPF3-203ENST00000467514 RNPEPQ9H4A4 650 aa12.37□□□□□ -0.43
PRPF3-203ENST00000467514 SETD4Q9NVD3 440 aa12.37□□□□□ -0.43
PRPF3-203ENST00000467514 BARX2Q9UMQ3 279 aaPredicted RBP12.37□□□□□ -0.43
PRPF3-203ENST00000467514 USP15Q9Y4E8 981 aaPredicted RBP12.37□□□□□ -0.43
PRPF3-203ENST00000467514 SPTBN4Q9H254 2564 aa12.37□□□□□ -0.43
PRPF3-203ENST00000467514 LOC730098B7Z3J9 87 aa12.36□□□□□ -0.43
PRPF3-203ENST00000467514 SRGAP2BP0DMP2 458 aa12.36□□□□□ -0.43
PRPF3-203ENST00000467514 SP100P23497 879 aaPredicted RBP12.36□□□□□ -0.43
PRPF3-203ENST00000467514 CCND2P30279 289 aa12.36□□□□□ -0.43
PRPF3-203ENST00000467514 AVPR2P30518 371 aa12.36□□□□□ -0.43
PRPF3-203ENST00000467514 NDUFA8P51970 172 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms