RNA–Protein interactions for RNA: ENST00000467182.1

COL4A1-202, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 3

Gene COL4A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-202ENST00000467182 PSMA7O14818 248 aa14.39□□□□□ -0.11
COL4A1-202ENST00000467182 PPFIA4O75335 1185 aa14.39□□□□□ -0.11
COL4A1-202ENST00000467182 DGAT1O75907 488 aa14.39□□□□□ -0.11
COL4A1-202ENST00000467182 MYBP10242 640 aa14.39□□□□□ -0.11
COL4A1-202ENST00000467182 HSPA6P17066 643 aa14.39□□□□□ -0.11
COL4A1-202ENST00000467182 SLC26A2P50443 739 aa14.39□□□□□ -0.11
COL4A1-202ENST00000467182 IRX5P78411 483 aaPredicted RBP14.39□□□□□ -0.11
COL4A1-202ENST00000467182 BMT2Q1RMZ1 405 aa14.39□□□□□ -0.11
COL4A1-202ENST00000467182 ZCWPW2Q504Y3 356 aa14.39□□□□□ -0.11
COL4A1-202ENST00000467182 CDKAL1Q5VV42 579 aa14.39□□□□□ -0.11
COL4A1-202ENST00000467182 CENPPQ6IPU0 288 aa14.39□□□□□ -0.11
COL4A1-202ENST00000467182 SARM1Q6SZW1 724 aa14.39□□□□□ -0.11
COL4A1-202ENST00000467182 MAEAQ7L5Y9 396 aa14.39□□□□□ -0.11
COL4A1-202ENST00000467182 MYCT1Q8N699 235 aa14.39□□□□□ -0.11
COL4A1-202ENST00000467182 ZNF507Q8TCN5 953 aa14.39□□□□□ -0.11
COL4A1-202ENST00000467182 ZNF296Q8WUU4 475 aaPredicted RBP14.39□□□□□ -0.11
COL4A1-202ENST00000467182 GLG1Q92896 1179 aa14.39□□□□□ -0.11
COL4A1-202ENST00000467182 CCDC43Q96MW1 224 aaKnown RBP14.39□□□□□ -0.11
COL4A1-202ENST00000467182 ZHX3Q9H4I2 956 aa14.39□□□□□ -0.11
COL4A1-202ENST00000467182 SAMSN1Q9NSI8 373 aaKnown RBP14.39□□□□□ -0.11
COL4A1-202ENST00000467182 NRBP2Q9NSY0 501 aa14.39□□□□□ -0.11
COL4A1-202ENST00000467182 FAM184BQ9ULE4 1060 aa14.39□□□□□ -0.11
COL4A1-202ENST00000467182 Q9Y3F1 56 aa14.39□□□□□ -0.11
COL4A1-202ENST00000467182 NFE2L3Q9Y4A8 694 aa14.39□□□□□ -0.11
COL4A1-202ENST00000467182 SIP14410 1827 aa14.38□□□□□ -0.11
COL4A1-202ENST00000467182 DYNC1LI2O43237 492 aaPredicted RBP14.38□□□□□ -0.11
COL4A1-202ENST00000467182 FKTNO75072 461 aa14.38□□□□□ -0.11
COL4A1-202ENST00000467182 PPP1R37O75864 691 aa14.38□□□□□ -0.11
COL4A1-202ENST00000467182 MAPTP10636 758 aaKnown RBP14.38□□□□□ -0.11
COL4A1-202ENST00000467182 PLS3P13797 630 aa14.38□□□□□ -0.11
COL4A1-202ENST00000467182 AKR1A1P14550 325 aa14.38□□□□□ -0.11
COL4A1-202ENST00000467182 MARK3P27448 753 aa14.38□□□□□ -0.11
COL4A1-202ENST00000467182 NMT1P30419 496 aaKnown RBP14.38□□□□□ -0.11
COL4A1-202ENST00000467182 SOX10P56693 466 aa14.38□□□□□ -0.11
COL4A1-202ENST00000467182 CACNB2Q08289 660 aaPredicted RBP14.38□□□□□ -0.11
COL4A1-202ENST00000467182 STIM1Q13586 685 aa14.38□□□□□ -0.11
COL4A1-202ENST00000467182 EMC2Q15006 297 aa14.38□□□□□ -0.11
COL4A1-202ENST00000467182 MFSD14CQ5VZR4 134 aa14.38□□□□□ -0.11
COL4A1-202ENST00000467182 ANKRD40Q6AI12 368 aa14.38□□□□□ -0.11
COL4A1-202ENST00000467182 FOXR2Q6PJQ5 311 aa14.38□□□□□ -0.11
COL4A1-202ENST00000467182 ZNF720Q7Z2F6 126 aa14.38□□□□□ -0.11
COL4A1-202ENST00000467182 TLK2Q86UE8 772 aa14.38□□□□□ -0.11
COL4A1-202ENST00000467182 MYOCDQ8IZQ8 938 aa14.38□□□□□ -0.11
COL4A1-202ENST00000467182 BSNDQ8WZ55 320 aa14.38□□□□□ -0.11
COL4A1-202ENST00000467182 ERO1AQ96HE7 468 aa14.38□□□□□ -0.11
COL4A1-202ENST00000467182 KCTD10Q9H3F6 313 aa14.38□□□□□ -0.11
COL4A1-202ENST00000467182 RNPEPQ9H4A4 650 aa14.38□□□□□ -0.11
COL4A1-202ENST00000467182 ATP6V0A4Q9HBG4 840 aa14.38□□□□□ -0.11
COL4A1-202ENST00000467182 PPME1Q9Y570 386 aa14.38□□□□□ -0.11
COL4A1-202ENST00000467182 ZMYM2Q9UBW7 1377 aa14.37□□□□□ -0.11
COL4A1-202ENST00000467182 IGKV6-21A0A0C4DH24 114 aa14.37□□□□□ -0.11
COL4A1-202ENST00000467182 MAFO75444 373 aaPredicted RBP14.37□□□□□ -0.11
COL4A1-202ENST00000467182 GNRH1P01148 92 aa14.37□□□□□ -0.11
COL4A1-202ENST00000467182 ZNF286BP0CG31 522 aa14.37□□□□□ -0.11
COL4A1-202ENST00000467182 ATP1A3P13637 1013 aa14.37□□□□□ -0.11
COL4A1-202ENST00000467182 ELNP15502 786 aa14.37□□□□□ -0.11
COL4A1-202ENST00000467182 HOXD10P28358 340 aa14.37□□□□□ -0.11
COL4A1-202ENST00000467182 RFC5P40937 340 aa14.37□□□□□ -0.11
COL4A1-202ENST00000467182 NCKAP1LP55160 1127 aa14.37□□□□□ -0.11
COL4A1-202ENST00000467182 RTP1P59025 263 aa14.37□□□□□ -0.11
COL4A1-202ENST00000467182 NKX3-2P78367 333 aa14.37□□□□□ -0.11
COL4A1-202ENST00000467182 FAM102BQ5T8I3 360 aa14.37□□□□□ -0.11
COL4A1-202ENST00000467182 MAP3K21Q5TCX8 1036 aa14.37□□□□□ -0.11
COL4A1-202ENST00000467182 IRF2BP1Q8IU81 584 aa14.37□□□□□ -0.11
COL4A1-202ENST00000467182 MCPH1Q8NEM0 835 aa14.37□□□□□ -0.11
COL4A1-202ENST00000467182 PDLIM2Q96JY6 352 aa14.37□□□□□ -0.11
COL4A1-202ENST00000467182 DRC1Q96MC2 740 aa14.37□□□□□ -0.11
COL4A1-202ENST00000467182 MRPL44Q9H9J2 332 aaKnown RBP14.37□□□□□ -0.11
COL4A1-202ENST00000467182 ERAP1Q9NZ08 941 aa14.37□□□□□ -0.11
COL4A1-202ENST00000467182 EIF3DO15371 548 aaKnown RBP eCLIP14.36□□□□□ -0.11
COL4A1-202ENST00000467182 HBP1O60381 514 aa14.36□□□□□ -0.11
COL4A1-202ENST00000467182 DUSP11O75319 330 aaKnown RBP14.36□□□□□ -0.11
COL4A1-202ENST00000467182 PRPF6O94906 941 aaKnown RBP14.36□□□□□ -0.11
COL4A1-202ENST00000467182 ARL2P36404 184 aa14.36□□□□□ -0.11
COL4A1-202ENST00000467182 C1QTNF8P60827 252 aa14.36□□□□□ -0.11
COL4A1-202ENST00000467182 KCNA1Q09470 495 aa14.36□□□□□ -0.11
COL4A1-202ENST00000467182 MKRN4PQ13434 485 aaPredicted RBP14.36□□□□□ -0.11
COL4A1-202ENST00000467182 DGKDQ16760 1214 aa14.36□□□□□ -0.11
COL4A1-202ENST00000467182 ZC2HC1CQ53FD0 456 aaPredicted RBP14.36□□□□□ -0.11
COL4A1-202ENST00000467182 ODR4Q5SWX8 454 aa14.36□□□□□ -0.11
COL4A1-202ENST00000467182 APTXQ7Z2E3 356 aaKnown RBP14.36□□□□□ -0.11
COL4A1-202ENST00000467182 ZC3H3Q8IXZ2 948 aaKnown RBP14.36□□□□□ -0.11
COL4A1-202ENST00000467182 KAT2BQ92831 832 aa14.36□□□□□ -0.11
COL4A1-202ENST00000467182 KIFAP3Q92845 792 aa14.36□□□□□ -0.11
COL4A1-202ENST00000467182 NTPCRQ9BSD7 190 aaKnown RBP14.36□□□□□ -0.11
COL4A1-202ENST00000467182 UPF3AQ9H1J1 476 aaKnown RBP14.36□□□□□ -0.11
COL4A1-202ENST00000467182 ST6GALNAC4Q9H4F1 302 aa14.36□□□□□ -0.11
COL4A1-202ENST00000467182 UBE4BO95155 1302 aa14.36□□□□□ -0.11
COL4A1-202ENST00000467182 BICDL2A1A5D9 508 aa14.35□□□□□ -0.11
COL4A1-202ENST00000467182 MYADML2A6NDP7 307 aa14.35□□□□□ -0.11
COL4A1-202ENST00000467182 H3BRB1 525 aa14.35□□□□□ -0.11
COL4A1-202ENST00000467182 SEPT4O43236 478 aa14.35□□□□□ -0.11
COL4A1-202ENST00000467182 ADCY3O60266 1144 aa14.35□□□□□ -0.11
COL4A1-202ENST00000467182 GCNT3O95395 438 aa14.35□□□□□ -0.11
COL4A1-202ENST00000467182 ADCY5O95622 1261 aa14.35□□□□□ -0.11
COL4A1-202ENST00000467182 F2P00734 622 aa14.35□□□□□ -0.11
COL4A1-202ENST00000467182 CCND3P30281 292 aaPredicted RBP14.35□□□□□ -0.11
COL4A1-202ENST00000467182 ZNF75DP51815 510 aa14.35□□□□□ -0.11
COL4A1-202ENST00000467182 POLGP54098 1239 aaPredicted RBP14.35□□□□□ -0.11
COL4A1-202ENST00000467182 GJA9P57773 515 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms