RNA–Protein interactions for RNA: ENST00000466742.5

ABCF3-206, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 2,331 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-206ENST00000466742 KIFAP3Q92845 792 aa16.84■□□□□ 0.29
ABCF3-206ENST00000466742 IFT43Q96FT9 208 aa16.84■□□□□ 0.29
ABCF3-206ENST00000466742 FOXP1Q9H334 677 aaPredicted RBP16.84■□□□□ 0.29
ABCF3-206ENST00000466742 SH2D4AQ9H788 454 aa16.84■□□□□ 0.29
ABCF3-206ENST00000466742 TDRD3Q9H7E2 651 aaKnown RBP16.84■□□□□ 0.29
ABCF3-206ENST00000466742 MTMR4Q9NYA4 1195 aa16.84■□□□□ 0.29
ABCF3-206ENST00000466742 MAD2L2Q9UI95 211 aa16.84■□□□□ 0.29
ABCF3-206ENST00000466742 RWDD2AQ9UIY3 292 aa16.84■□□□□ 0.29
ABCF3-206ENST00000466742 CTNND2Q9UQB3 1225 aa16.84■□□□□ 0.29
ABCF3-206ENST00000466742 USO1O60763 962 aaKnown RBP16.83■□□□□ 0.28
ABCF3-206ENST00000466742 AKR1B1P15121 316 aa16.83■□□□□ 0.28
ABCF3-206ENST00000466742 SP100P23497 879 aaPredicted RBP16.83■□□□□ 0.28
ABCF3-206ENST00000466742 DPYDQ12882 1025 aa16.83■□□□□ 0.28
ABCF3-206ENST00000466742 CFAP221Q4G0U5 840 aa16.83■□□□□ 0.28
ABCF3-206ENST00000466742 FAM133BQ5BKY9 247 aaKnown RBP16.83■□□□□ 0.28
ABCF3-206ENST00000466742 CCDC17Q96LX7 622 aa16.83■□□□□ 0.28
ABCF3-206ENST00000466742 ARHGEF3Q9NR81 526 aa16.83■□□□□ 0.28
ABCF3-206ENST00000466742 COL2A1P02458 1487 aaPredicted RBP16.83■□□□□ 0.28
ABCF3-206ENST00000466742 PSME4Q14997 1843 aa16.83■□□□□ 0.28
ABCF3-206ENST00000466742 ATRNL1Q5VV63 1379 aa16.83■□□□□ 0.28
ABCF3-206ENST00000466742 PALM3A6NDB9 673 aaPredicted RBP16.82■□□□□ 0.28
ABCF3-206ENST00000466742 DDTLA6NHG4 134 aaPredicted RBP16.82■□□□□ 0.28
ABCF3-206ENST00000466742 NFKBIEO00221 500 aa16.82■□□□□ 0.28
ABCF3-206ENST00000466742 IGF2BP3O00425 579 aaKnown RBP eCLIP16.82■□□□□ 0.28
ABCF3-206ENST00000466742 MSH2P43246 934 aa16.82■□□□□ 0.28
ABCF3-206ENST00000466742 ATP11AP98196 1134 aa16.82■□□□□ 0.28
ABCF3-206ENST00000466742 CDK17Q00537 523 aa16.82■□□□□ 0.28
ABCF3-206ENST00000466742 TCP10Q12799 353 aa16.82■□□□□ 0.28
ABCF3-206ENST00000466742 UAP1Q16222 522 aaPredicted RBP16.82■□□□□ 0.28
ABCF3-206ENST00000466742 SH3BP5LQ7L8J4 393 aa16.82■□□□□ 0.28
ABCF3-206ENST00000466742 DIS3L2Q8IYB7 885 aaKnown RBP16.82■□□□□ 0.28
ABCF3-206ENST00000466742 LRRC45Q96CN5 670 aa16.82■□□□□ 0.28
ABCF3-206ENST00000466742 LZTS2Q9BRK4 669 aa16.82■□□□□ 0.28
ABCF3-206ENST00000466742 CTNNAL1Q9UBT7 734 aa16.82■□□□□ 0.28
ABCF3-206ENST00000466742 NOVA2Q9UNW9 492 aaKnown RBP16.82■□□□□ 0.28
ABCF3-206ENST00000466742 KCNJ14Q9UNX9 436 aa16.82■□□□□ 0.28
ABCF3-206ENST00000466742 SRPRBQ9Y5M8 271 aaKnown RBP16.82■□□□□ 0.28
ABCF3-206ENST00000466742 LACTBP83111 547 aaPredicted RBP16.82■□□□□ 0.28
ABCF3-206ENST00000466742 LMNB2Q03252 620 aa16.82■□□□□ 0.28
ABCF3-206ENST00000466742 CXCL9Q07325 125 aa16.82■□□□□ 0.28
ABCF3-206ENST00000466742 GALNTL6Q49A17 601 aa16.82■□□□□ 0.28
ABCF3-206ENST00000466742 SESTD1Q86VW0 696 aa16.82■□□□□ 0.28
ABCF3-206ENST00000466742 NOSTRINQ8IVI9 506 aa16.82■□□□□ 0.28
ABCF3-206ENST00000466742 JDP2Q8WYK2 163 aa16.82■□□□□ 0.28
ABCF3-206ENST00000466742 MAF1Q9H063 256 aa16.82■□□□□ 0.28
ABCF3-206ENST00000466742 ZNHIT6Q9NWK9 470 aaKnown RBP16.82■□□□□ 0.28
ABCF3-206ENST00000466742 ATXN10Q9UBB4 475 aa16.82■□□□□ 0.28
ABCF3-206ENST00000466742 LTBP3Q9NS15 1303 aa16.82■□□□□ 0.28
ABCF3-206ENST00000466742 EIF4E1BA6NMX2 242 aaKnown RBP16.81■□□□□ 0.28
ABCF3-206ENST00000466742 BTBD18B2RXH4 712 aa16.81■□□□□ 0.28
ABCF3-206ENST00000466742 CXCR5P32302 372 aa16.81■□□□□ 0.28
ABCF3-206ENST00000466742 POLE2P56282 527 aa16.81■□□□□ 0.28
ABCF3-206ENST00000466742 TRIM68Q6AZZ1 485 aa16.81■□□□□ 0.28
ABCF3-206ENST00000466742 DNAJC14Q6Y2X3 702 aaPredicted RBP16.81■□□□□ 0.28
ABCF3-206ENST00000466742 SMYD4Q8IYR2 804 aaPredicted RBP16.81■□□□□ 0.28
ABCF3-206ENST00000466742 MTMR14Q8NCE2 650 aa16.81■□□□□ 0.28
ABCF3-206ENST00000466742 ZNF507Q8TCN5 953 aa16.81■□□□□ 0.28
ABCF3-206ENST00000466742 PAGE5Q96GU1 130 aa16.81■□□□□ 0.28
ABCF3-206ENST00000466742 PHF20Q9BVI0 1012 aa16.81■□□□□ 0.28
ABCF3-206ENST00000466742 DNAJC18Q9H819 358 aa16.81■□□□□ 0.28
ABCF3-206ENST00000466742 DMAP1Q9NPF5 467 aaPredicted RBP16.81■□□□□ 0.28
ABCF3-206ENST00000466742 LRWD1Q9UFC0 647 aa16.81■□□□□ 0.28
ABCF3-206ENST00000466742 OATP04181 439 aa16.81■□□□□ 0.28
ABCF3-206ENST00000466742 KRT16P08779 473 aa16.81■□□□□ 0.28
ABCF3-206ENST00000466742 DLGAP5Q15398 846 aa16.81■□□□□ 0.28
ABCF3-206ENST00000466742 PFKFB3Q16875 520 aaPredicted RBP16.81■□□□□ 0.28
ABCF3-206ENST00000466742 OR52E8Q6IFG1 317 aa16.81■□□□□ 0.28
ABCF3-206ENST00000466742 TMEM154Q6P9G4 183 aa16.81■□□□□ 0.28
ABCF3-206ENST00000466742 STAG2Q8N3U4 1231 aa16.81■□□□□ 0.28
ABCF3-206ENST00000466742 OR2W6PQ8NHA6 318 aa16.81■□□□□ 0.28
ABCF3-206ENST00000466742 SHISA4Q96DD7 197 aa16.81■□□□□ 0.28
ABCF3-206ENST00000466742 ISCUQ9H1K1 167 aa16.81■□□□□ 0.28
ABCF3-206ENST00000466742 ECT2Q9H8V3 914 aa16.81■□□□□ 0.28
ABCF3-206ENST00000466742 BCS1LQ9Y276 419 aa16.81■□□□□ 0.28
ABCF3-206ENST00000466742 ZNF510Q9Y2H8 683 aa16.81■□□□□ 0.28
ABCF3-206ENST00000466742 SRCAPQ6ZRS2 3230 aa16.81■□□□□ 0.28
ABCF3-206ENST00000466742 BRCA1P38398 1863 aaKnown RBP16.8■□□□□ 0.28
ABCF3-206ENST00000466742 A8MUI8 341 aa16.8■□□□□ 0.28
ABCF3-206ENST00000466742 LGALS16A8MUM7 142 aa16.8■□□□□ 0.28
ABCF3-206ENST00000466742 MYBP10242 640 aa16.8■□□□□ 0.28
ABCF3-206ENST00000466742 SCG2P13521 617 aa16.8■□□□□ 0.28
ABCF3-206ENST00000466742 CTNNA1P35221 906 aaKnown RBP16.8■□□□□ 0.28
ABCF3-206ENST00000466742 TOB1P50616 345 aaPredicted RBP16.8■□□□□ 0.28
ABCF3-206ENST00000466742 MAGOHP61326 146 aaKnown RBP16.8■□□□□ 0.28
ABCF3-206ENST00000466742 CYP27A1Q02318 531 aa16.8■□□□□ 0.28
ABCF3-206ENST00000466742 KLC1Q07866 573 aa16.8■□□□□ 0.28
ABCF3-206ENST00000466742 CIAPIN1Q6FI81 312 aa16.8■□□□□ 0.28
ABCF3-206ENST00000466742 SYCP3Q8IZU3 236 aa16.8■□□□□ 0.28
ABCF3-206ENST00000466742 MAGOHBQ96A72 148 aaKnown RBP16.8■□□□□ 0.28
ABCF3-206ENST00000466742 OPTNQ96CV9 577 aa16.8■□□□□ 0.28
ABCF3-206ENST00000466742 RAB17Q9H0T7 212 aa16.8■□□□□ 0.28
ABCF3-206ENST00000466742 VCXQ9H320 206 aa16.8■□□□□ 0.28
ABCF3-206ENST00000466742 TMEM165Q9HC07 324 aa16.8■□□□□ 0.28
ABCF3-206ENST00000466742 TMOD2Q9NZR1 351 aa16.8■□□□□ 0.28
ABCF3-206ENST00000466742 VPS54Q9P1Q0 977 aa16.8■□□□□ 0.28
ABCF3-206ENST00000466742 ECM29Q5VYK3 1845 aa16.8■□□□□ 0.28
ABCF3-206ENST00000466742 hCG_1642624A0A1W2PR95 340 aa16.8■□□□□ 0.28
ABCF3-206ENST00000466742 ZNF263O14978 683 aa16.8■□□□□ 0.28
ABCF3-206ENST00000466742 CTNND1O60716 968 aaKnown RBP16.8■□□□□ 0.28
ABCF3-206ENST00000466742 HIP1RO75146 1068 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms