RNA–Protein interactions for RNA: ENST00000466454.1

CLCA3P-202, Transcript of chloride channel accessory 3, pseudogene, humanhuman

TSL 1 (best) BASIC

Gene CLCA3P, Length 3,412 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3P-202ENST00000466454 NMIQ13287 307 aaPredicted RBP4.89□□□□□ -1.63
CLCA3P-202ENST00000466454 SEMA3AQ14563 771 aa4.89□□□□□ -1.63
CLCA3P-202ENST00000466454 PPA1Q15181 289 aa4.89□□□□□ -1.63
CLCA3P-202ENST00000466454 NXPE4Q6UWF7 544 aa4.89□□□□□ -1.63
CLCA3P-202ENST00000466454 CWC27Q6UX04 472 aaKnown RBP4.89□□□□□ -1.63
CLCA3P-202ENST00000466454 NEK10Q6ZWH5 1172 aa4.89□□□□□ -1.63
CLCA3P-202ENST00000466454 ANKRD18AQ8IVF6 992 aa4.89□□□□□ -1.63
CLCA3P-202ENST00000466454 SLFN12Q8IYM2 578 aa4.89□□□□□ -1.63
CLCA3P-202ENST00000466454 ASB12Q8WXK4 309 aa4.89□□□□□ -1.63
CLCA3P-202ENST00000466454 CENPIQ92674 756 aaPredicted RBP4.89□□□□□ -1.63
CLCA3P-202ENST00000466454 HDAC2Q92769 488 aaKnown RBP4.89□□□□□ -1.63
CLCA3P-202ENST00000466454 TTC17Q96AE7 1141 aa4.89□□□□□ -1.63
CLCA3P-202ENST00000466454 NACC2Q96BF6 587 aa4.89□□□□□ -1.63
CLCA3P-202ENST00000466454 HIC2Q96JB3 615 aa4.89□□□□□ -1.63
CLCA3P-202ENST00000466454 PGBD1Q96JS3 809 aa4.89□□□□□ -1.63
CLCA3P-202ENST00000466454 TMEM74Q96NL1 305 aa4.89□□□□□ -1.63
CLCA3P-202ENST00000466454 MYLK2Q9H1R3 596 aa4.89□□□□□ -1.63
CLCA3P-202ENST00000466454 CBX8Q9HC52 389 aa4.89□□□□□ -1.63
CLCA3P-202ENST00000466454 AGO4Q9HCK5 861 aaKnown RBP4.89□□□□□ -1.63
CLCA3P-202ENST00000466454 INCENPQ9NQS7 918 aa4.89□□□□□ -1.63
CLCA3P-202ENST00000466454 PLSCR4Q9NRQ2 329 aa4.89□□□□□ -1.63
CLCA3P-202ENST00000466454 IRAK4Q9NWZ3 460 aa4.89□□□□□ -1.63
CLCA3P-202ENST00000466454 PCSK1NQ9UHG2 260 aa4.89□□□□□ -1.63
CLCA3P-202ENST00000466454 PARP3Q9Y6F1 533 aa4.89□□□□□ -1.63
CLCA3P-202ENST00000466454 SQORQ9Y6N5 450 aa4.89□□□□□ -1.63
CLCA3P-202ENST00000466454 ZNF609O15014 1411 aa4.89□□□□□ -1.63
CLCA3P-202ENST00000466454 CPDO75976 1380 aa4.88□□□□□ -1.63
CLCA3P-202ENST00000466454 NEURL1BA8MQ27 555 aa4.88□□□□□ -1.63
CLCA3P-202ENST00000466454 HOXC11O43248 304 aaPredicted RBP4.88□□□□□ -1.63
CLCA3P-202ENST00000466454 XPOTO43592 962 aaKnown RBP4.88□□□□□ -1.63
CLCA3P-202ENST00000466454 APBA3O96018 575 aa4.88□□□□□ -1.63
CLCA3P-202ENST00000466454 PDGFAP04085 211 aa4.88□□□□□ -1.63
CLCA3P-202ENST00000466454 GRIK1P39086 918 aa4.88□□□□□ -1.63
CLCA3P-202ENST00000466454 PRPHP41219 470 aa4.88□□□□□ -1.63
CLCA3P-202ENST00000466454 DCAF7P61962 342 aa4.88□□□□□ -1.63
CLCA3P-202ENST00000466454 MLLT1Q03111 559 aaPredicted RBP4.88□□□□□ -1.63
CLCA3P-202ENST00000466454 GABPB1Q06547 395 aaPredicted RBP4.88□□□□□ -1.63
CLCA3P-202ENST00000466454 SNW1Q13573 536 aaKnown RBP4.88□□□□□ -1.63
CLCA3P-202ENST00000466454 PCBP2Q15366 365 aaKnown RBP eCLIP4.88□□□□□ -1.63
CLCA3P-202ENST00000466454 PKDCCQ504Y2 493 aa4.88□□□□□ -1.63
CLCA3P-202ENST00000466454 BLOC1S2Q6QNY1 142 aa4.88□□□□□ -1.63
CLCA3P-202ENST00000466454 CCDC83Q8IWF9 413 aa4.88□□□□□ -1.63
CLCA3P-202ENST00000466454 SPATA5Q8NB90 893 aa4.88□□□□□ -1.63
CLCA3P-202ENST00000466454 SCG3Q8WXD2 468 aaKnown RBP4.88□□□□□ -1.63
CLCA3P-202ENST00000466454 SUCLG2Q96I99 432 aa4.88□□□□□ -1.63
CLCA3P-202ENST00000466454 MTRQ99707 1265 aa4.88□□□□□ -1.63
CLCA3P-202ENST00000466454 KRTAP3-3Q9BYR6 98 aa4.88□□□□□ -1.63
CLCA3P-202ENST00000466454 KRTAP3-2Q9BYR7 98 aa4.88□□□□□ -1.63
CLCA3P-202ENST00000466454 DACT1Q9NYF0 836 aa4.88□□□□□ -1.63
CLCA3P-202ENST00000466454 OGFRQ9NZT2 677 aa4.88□□□□□ -1.63
CLCA3P-202ENST00000466454 PYCARDQ9ULZ3 195 aa4.88□□□□□ -1.63
CLCA3P-202ENST00000466454 MAP3K2Q9Y2U5 619 aa4.88□□□□□ -1.63
CLCA3P-202ENST00000466454 RREB1Q92766 1687 aa4.88□□□□□ -1.63
CLCA3P-202ENST00000466454 NHSL1Q5SYE7 1610 aa4.88□□□□□ -1.63
CLCA3P-202ENST00000466454 SLC7A4O43246 635 aa4.88□□□□□ -1.63
CLCA3P-202ENST00000466454 CTNND1O60716 968 aaKnown RBP4.88□□□□□ -1.63
CLCA3P-202ENST00000466454 CIAO1O76071 339 aa4.88□□□□□ -1.63
CLCA3P-202ENST00000466454 ATP6V1E1P36543 226 aa4.88□□□□□ -1.63
CLCA3P-202ENST00000466454 PPFIA1Q13136 1202 aa4.88□□□□□ -1.63
CLCA3P-202ENST00000466454 GCKRQ14397 625 aa4.88□□□□□ -1.63
CLCA3P-202ENST00000466454 MUM1Q2TAK8 710 aa4.88□□□□□ -1.63
CLCA3P-202ENST00000466454 MMEL1Q495T6 779 aa4.88□□□□□ -1.63
CLCA3P-202ENST00000466454 ZSCAN25Q6NSZ9 544 aa4.88□□□□□ -1.63
CLCA3P-202ENST00000466454 CCDC149Q6ZUS6 474 aa4.88□□□□□ -1.63
CLCA3P-202ENST00000466454 SPATS2Q86XZ4 545 aaKnown RBP4.88□□□□□ -1.63
CLCA3P-202ENST00000466454 ETFBKMTQ8IXQ9 262 aa4.88□□□□□ -1.63
CLCA3P-202ENST00000466454 BRSK1Q8TDC3 778 aa4.88□□□□□ -1.63
CLCA3P-202ENST00000466454 BHMTQ93088 406 aa4.88□□□□□ -1.63
CLCA3P-202ENST00000466454 NT5C1BQ96P26 610 aa4.88□□□□□ -1.63
CLCA3P-202ENST00000466454 TAAR9Q96RI9 348 aa4.88□□□□□ -1.63
CLCA3P-202ENST00000466454 ARHGAP9Q9BRR9 750 aa4.88□□□□□ -1.63
CLCA3P-202ENST00000466454 BRD9Q9H8M2 597 aa4.88□□□□□ -1.63
CLCA3P-202ENST00000466454 VTA1Q9NP79 307 aa4.88□□□□□ -1.63
CLCA3P-202ENST00000466454 DLEC1Q9Y238 1755 aa4.88□□□□□ -1.63
CLCA3P-202ENST00000466454 NEDD4P46934 1319 aa4.88□□□□□ -1.63
CLCA3P-202ENST00000466454 ABCA3Q99758 1704 aa4.88□□□□□ -1.63
CLCA3P-202ENST00000466454 AKAP11Q9UKA4 1901 aa4.88□□□□□ -1.63
CLCA3P-202ENST00000466454 A0A0D9SFI3 127 aa4.88□□□□□ -1.63
CLCA3P-202ENST00000466454 PRKD3O94806 890 aa4.88□□□□□ -1.63
CLCA3P-202ENST00000466454 HSPA4LO95757 839 aa4.88□□□□□ -1.63
CLCA3P-202ENST00000466454 MSL3P1P0C860 447 aa4.88□□□□□ -1.63
CLCA3P-202ENST00000466454 GBP2P32456 591 aaPredicted RBP4.88□□□□□ -1.63
CLCA3P-202ENST00000466454 TNNT3P45378 269 aaPredicted RBP4.88□□□□□ -1.63
CLCA3P-202ENST00000466454 RPIAP49247 311 aa4.88□□□□□ -1.63
CLCA3P-202ENST00000466454 TGFB2P61812 414 aa4.88□□□□□ -1.63
CLCA3P-202ENST00000466454 ZNF267Q14586 743 aaPredicted RBP4.88□□□□□ -1.63
CLCA3P-202ENST00000466454 ACAP1Q15027 740 aa4.88□□□□□ -1.63
CLCA3P-202ENST00000466454 PTPRNQ16849 979 aa4.88□□□□□ -1.63
CLCA3P-202ENST00000466454 DESI1Q6ICB0 168 aa4.88□□□□□ -1.63
CLCA3P-202ENST00000466454 LIN54Q6MZP7 749 aa4.88□□□□□ -1.63
CLCA3P-202ENST00000466454 EPHX4Q8IUS5 362 aa4.88□□□□□ -1.63
CLCA3P-202ENST00000466454 ZNF619Q8N2I2 560 aa4.88□□□□□ -1.63
CLCA3P-202ENST00000466454 RNF214Q8ND24 703 aa4.88□□□□□ -1.63
CLCA3P-202ENST00000466454 IL17RDQ8NFM7 739 aa4.88□□□□□ -1.63
CLCA3P-202ENST00000466454 DDX1Q92499 740 aaKnown RBP4.88□□□□□ -1.63
CLCA3P-202ENST00000466454 KIAA1191Q96A73 305 aa4.88□□□□□ -1.63
CLCA3P-202ENST00000466454 TIGD1Q96MW7 591 aa4.88□□□□□ -1.63
CLCA3P-202ENST00000466454 L2HGDHQ9H9P8 463 aa4.88□□□□□ -1.63
CLCA3P-202ENST00000466454 RAB6BQ9NRW1 208 aa4.88□□□□□ -1.63
CLCA3P-202ENST00000466454 TMOD4Q9NZQ9 345 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms