RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 SPIRE1Q08AE8 756 aa6.14□□□□□ -1.43
LRCH3-211ENST00000466054 C21orf62-AS1Q17RA5 79 aa6.14□□□□□ -1.43
LRCH3-211ENST00000466054 C16orf59Q7L2K0 433 aa6.14□□□□□ -1.43
LRCH3-211ENST00000466054 ZNF627Q7L945 461 aa6.14□□□□□ -1.43
LRCH3-211ENST00000466054 PIP4K2CQ8TBX8 421 aa6.14□□□□□ -1.43
LRCH3-211ENST00000466054 TACO1Q9BSH4 297 aaKnown RBP6.14□□□□□ -1.43
LRCH3-211ENST00000466054 CELF4Q9BZC1 486 aaKnown RBP6.14□□□□□ -1.43
LRCH3-211ENST00000466054 SLC6A20Q9NP91 592 aa6.14□□□□□ -1.43
LRCH3-211ENST00000466054 PUF60Q9UHX1 559 aaKnown RBP6.14□□□□□ -1.43
LRCH3-211ENST00000466054 FAHP16930 419 aa6.13□□□□□ -1.43
LRCH3-211ENST00000466054 ST5P78524 1137 aa6.13□□□□□ -1.43
LRCH3-211ENST00000466054 CRHR2Q13324 411 aa6.13□□□□□ -1.43
LRCH3-211ENST00000466054 NOLC1Q14978 699 aaKnown RBP eCLIP6.13□□□□□ -1.43
LRCH3-211ENST00000466054 PAN2Q504Q3 1202 aaKnown RBP6.13□□□□□ -1.43
LRCH3-211ENST00000466054 RNF187Q5TA31 235 aaPredicted RBP6.13□□□□□ -1.43
LRCH3-211ENST00000466054 ZCCHC8Q6NZY4 707 aaKnown RBP6.13□□□□□ -1.43
LRCH3-211ENST00000466054 UBE2R2Q712K3 238 aaPredicted RBP6.13□□□□□ -1.43
LRCH3-211ENST00000466054 OTOP3Q7RTS5 596 aa6.13□□□□□ -1.43
LRCH3-211ENST00000466054 DDX53Q86TM3 631 aaKnown RBP6.13□□□□□ -1.43
LRCH3-211ENST00000466054 LRRTM3Q86VH5 581 aa6.13□□□□□ -1.43
LRCH3-211ENST00000466054 DHX37Q8IY37 1157 aaKnown RBP6.13□□□□□ -1.43
LRCH3-211ENST00000466054 AHI1Q8N157 1196 aa6.13□□□□□ -1.43
LRCH3-211ENST00000466054 PPM1KQ8N3J5 372 aa6.13□□□□□ -1.43
LRCH3-211ENST00000466054 GIT1Q9Y2X7 761 aa6.13□□□□□ -1.43
LRCH3-211ENST00000466054 TNPO3Q9Y5L0 923 aaKnown RBP6.13□□□□□ -1.43
LRCH3-211ENST00000466054 GNAT1P11488 350 aa6.12□□□□□ -1.43
LRCH3-211ENST00000466054 KCNA6P17658 529 aa6.12□□□□□ -1.43
LRCH3-211ENST00000466054 TUSC3Q13454 348 aa6.12□□□□□ -1.43
LRCH3-211ENST00000466054 CCDC142Q17RM4 750 aa6.12□□□□□ -1.43
LRCH3-211ENST00000466054 HABP4Q5JVS0 413 aaKnown RBP6.12□□□□□ -1.43
LRCH3-211ENST00000466054 DPP8Q6V1X1 898 aaPredicted RBP6.12□□□□□ -1.43
LRCH3-211ENST00000466054 CLEC4DQ8WXI8 215 aa6.12□□□□□ -1.43
LRCH3-211ENST00000466054 SCYL1Q96KG9 808 aa6.12□□□□□ -1.43
LRCH3-211ENST00000466054 ORAI3Q9BRQ5 295 aa6.12□□□□□ -1.43
LRCH3-211ENST00000466054 JAM3Q9BX67 310 aa6.12□□□□□ -1.43
LRCH3-211ENST00000466054 SLC2A4RGQ9NR83 387 aa6.12□□□□□ -1.43
LRCH3-211ENST00000466054 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.12□□□□□ -1.43
LRCH3-211ENST00000466054 MAPRE3Q9UPY8 281 aa6.12□□□□□ -1.43
LRCH3-211ENST00000466054 A0A087X0B3 334 aa6.11□□□□□ -1.43
LRCH3-211ENST00000466054 CYP27B1O15528 508 aa6.11□□□□□ -1.43
LRCH3-211ENST00000466054 SRGAP2CP0DJJ0 459 aa6.11□□□□□ -1.43
LRCH3-211ENST00000466054 PYGMP11217 842 aa6.11□□□□□ -1.43
LRCH3-211ENST00000466054 MASP1P48740 699 aa6.11□□□□□ -1.43
LRCH3-211ENST00000466054 LACTBP83111 547 aaPredicted RBP6.11□□□□□ -1.43
LRCH3-211ENST00000466054 CRY1Q16526 586 aa6.11□□□□□ -1.43
LRCH3-211ENST00000466054 CD276Q5ZPR3 534 aa6.11□□□□□ -1.43
LRCH3-211ENST00000466054 RBM12BQ8IXT5 1001 aaKnown RBP6.11□□□□□ -1.43
LRCH3-211ENST00000466054 THEMISQ8N1K5 641 aaPredicted RBP6.11□□□□□ -1.43
LRCH3-211ENST00000466054 KCNJ15Q99712 375 aa6.11□□□□□ -1.43
LRCH3-211ENST00000466054 ZNF703Q9H7S9 590 aaPredicted RBP6.11□□□□□ -1.43
LRCH3-211ENST00000466054 CATSPERZQ9NTU4 200 aa6.11□□□□□ -1.43
LRCH3-211ENST00000466054 CCDC66A2RUB6 948 aa6.1□□□□□ -1.43
LRCH3-211ENST00000466054 GSG1L2A8MUP6 293 aa6.1□□□□□ -1.43
LRCH3-211ENST00000466054 JMJD7P0C870 316 aa6.1□□□□□ -1.43
LRCH3-211ENST00000466054 MYCLP1P12525 358 aaPredicted RBP6.1□□□□□ -1.43
LRCH3-211ENST00000466054 FOXL1Q12952 345 aa6.1□□□□□ -1.43
LRCH3-211ENST00000466054 ZNF460Q14592 562 aa6.1□□□□□ -1.43
LRCH3-211ENST00000466054 GPR19Q15760 415 aa6.1□□□□□ -1.43
LRCH3-211ENST00000466054 CFAP100Q494V2 611 aa6.1□□□□□ -1.43
LRCH3-211ENST00000466054 LRCH2Q5VUJ6 765 aa6.1□□□□□ -1.43
LRCH3-211ENST00000466054 LAIR1Q6GTX8 287 aa6.1□□□□□ -1.43
LRCH3-211ENST00000466054 CNNM4Q6P4Q7 775 aa6.1□□□□□ -1.43
LRCH3-211ENST00000466054 ZNF662Q6ZS27 426 aa6.1□□□□□ -1.43
LRCH3-211ENST00000466054 KRT26Q7Z3Y9 468 aa6.1□□□□□ -1.43
LRCH3-211ENST00000466054 KIF18BQ86Y91 864 aa6.1□□□□□ -1.43
LRCH3-211ENST00000466054 THNSL2Q86YJ6 484 aa6.1□□□□□ -1.43
LRCH3-211ENST00000466054 ULK2Q8IYT8 1036 aa6.1□□□□□ -1.43
LRCH3-211ENST00000466054 UHMK1Q8TAS1 419 aaKnown RBP6.1□□□□□ -1.43
LRCH3-211ENST00000466054 TARS2Q9BW92 718 aaKnown RBP6.1□□□□□ -1.43
LRCH3-211ENST00000466054 SPC25Q9HBM1 224 aa6.1□□□□□ -1.43
LRCH3-211ENST00000466054 PLA2G3Q9NZ20 509 aa6.1□□□□□ -1.43
LRCH3-211ENST00000466054 SAMD15Q9P1V8 674 aa6.1□□□□□ -1.43
LRCH3-211ENST00000466054 PCSK5Q92824 1860 aa6.1□□□□□ -1.43
LRCH3-211ENST00000466054 ZNF839A8K0R7 811 aa6.09□□□□□ -1.43
LRCH3-211ENST00000466054 CAPN14A8MX76 684 aa6.09□□□□□ -1.43
LRCH3-211ENST00000466054 FOXN1O15353 648 aa6.09□□□□□ -1.43
LRCH3-211ENST00000466054 ARHGAP6O43182 974 aa6.09□□□□□ -1.43
LRCH3-211ENST00000466054 PDE8AO60658 829 aa6.09□□□□□ -1.43
LRCH3-211ENST00000466054 DNAJC6O75061 913 aa6.09□□□□□ -1.43
LRCH3-211ENST00000466054 NUDT3O95989 172 aa6.09□□□□□ -1.43
LRCH3-211ENST00000466054 VIL1P09327 827 aaKnown RBP6.09□□□□□ -1.43
LRCH3-211ENST00000466054 DNM2P50570 870 aa6.09□□□□□ -1.43
LRCH3-211ENST00000466054 ARHGAP44Q17R89 818 aa6.09□□□□□ -1.43
LRCH3-211ENST00000466054 WDR72Q3MJ13 1102 aa6.09□□□□□ -1.43
LRCH3-211ENST00000466054 TMEM177Q53S58 311 aa6.09□□□□□ -1.43
LRCH3-211ENST00000466054 CDCA2Q69YH5 1023 aaPredicted RBP6.09□□□□□ -1.43
LRCH3-211ENST00000466054 ABHD17CQ6PCB6 329 aa6.09□□□□□ -1.43
LRCH3-211ENST00000466054 OVCH1Q7RTY7 1134 aa6.09□□□□□ -1.43
LRCH3-211ENST00000466054 NLGN4XQ8N0W4 816 aa6.09□□□□□ -1.43
LRCH3-211ENST00000466054 D2HGDHQ8N465 521 aa6.09□□□□□ -1.43
LRCH3-211ENST00000466054 IGSF22Q8N9C0 903 aa6.09□□□□□ -1.43
LRCH3-211ENST00000466054 WNK4Q96J92 1243 aa6.09□□□□□ -1.43
LRCH3-211ENST00000466054 PDGFDQ9GZP0 370 aaPredicted RBP6.09□□□□□ -1.43
LRCH3-211ENST00000466054 MSL2Q9HCI7 577 aa6.09□□□□□ -1.43
LRCH3-211ENST00000466054 CBLCQ9ULV8 474 aa6.09□□□□□ -1.43
LRCH3-211ENST00000466054 COQ6Q9Y2Z9 468 aa6.09□□□□□ -1.43
LRCH3-211ENST00000466054 ANKRD62A6NC57 917 aa6.08□□□□□ -1.44
LRCH3-211ENST00000466054 FAM83GA6ND36 823 aa6.08□□□□□ -1.44
LRCH3-211ENST00000466054 ZNF561-AS1K7EIQ3 104 aa6.08□□□□□ -1.44
LRCH3-211ENST00000466054 IL18BPO95998 194 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms