RNA–Protein interactions for RNA: ENST00000465756.5

NPHP3-203, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 3,852 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-203ENST00000465756 DHX15O43143 795 aaKnown RBP12□□□□□ -0.49
NPHP3-203ENST00000465756 SLC17A8Q8NDX2 589 aa12□□□□□ -0.49
NPHP3-203ENST00000465756 CCDC51Q96ER9 411 aa12□□□□□ -0.49
NPHP3-203ENST00000465756 EIF2AK1Q9BQI3 630 aaKnown RBP12□□□□□ -0.49
NPHP3-203ENST00000465756 CFAP45Q9UL16 551 aa12□□□□□ -0.49
NPHP3-203ENST00000465756 GTF3C5Q9Y5Q8 519 aaPredicted RBP12□□□□□ -0.49
NPHP3-203ENST00000465756 YWHABP31946 246 aaKnown RBP12□□□□□ -0.49
NPHP3-203ENST00000465756 SUCLA2Q9P2R7 463 aaPredicted RBP12□□□□□ -0.49
NPHP3-203ENST00000465756 PCDHB7Q9Y5E2 793 aa12□□□□□ -0.49
NPHP3-203ENST00000465756 GHRP10912 638 aa12□□□□□ -0.49
NPHP3-203ENST00000465756 PPP2R2DQ66LE6 453 aa12□□□□□ -0.49
NPHP3-203ENST00000465756 CATSPER4Q7RTX7 472 aa12□□□□□ -0.49
NPHP3-203ENST00000465756 DYDC2Q96IM9 177 aa12□□□□□ -0.49
NPHP3-203ENST00000465756 CYP26B1Q9NR63 512 aa12□□□□□ -0.49
NPHP3-203ENST00000465756 CHST12Q9NRB3 414 aa12□□□□□ -0.49
NPHP3-203ENST00000465756 NR1I2O75469 434 aa11.99□□□□□ -0.49
NPHP3-203ENST00000465756 AXLP30530 894 aa11.99□□□□□ -0.49
NPHP3-203ENST00000465756 HOXC8P31273 242 aa11.99□□□□□ -0.49
NPHP3-203ENST00000465756 FXR2P51116 673 aaKnown RBP eCLIP11.99□□□□□ -0.49
NPHP3-203ENST00000465756 SPOUT1Q5T280 376 aaKnown RBP11.99□□□□□ -0.49
NPHP3-203ENST00000465756 BANK1Q8NDB2 785 aa11.99□□□□□ -0.49
NPHP3-203ENST00000465756 RAD9AQ99638 391 aa11.99□□□□□ -0.49
NPHP3-203ENST00000465756 FSD2A1L4K1 749 aa11.99□□□□□ -0.49
NPHP3-203ENST00000465756 NPAS4Q8IUM7 802 aa11.99□□□□□ -0.49
NPHP3-203ENST00000465756 TMEM87AQ8NBN3 555 aa11.99□□□□□ -0.49
NPHP3-203ENST00000465756 LENG9Q96B70 501 aa11.99□□□□□ -0.49
NPHP3-203ENST00000465756 KIF2CQ99661 725 aa11.99□□□□□ -0.49
NPHP3-203ENST00000465756 ADPGKQ9BRR6 497 aa11.99□□□□□ -0.49
NPHP3-203ENST00000465756 MRPL9Q9BYD2 267 aaKnown RBP11.99□□□□□ -0.49
NPHP3-203ENST00000465756 DBR1Q9UK59 544 aaKnown RBP11.99□□□□□ -0.49
NPHP3-203ENST00000465756 SLC37A4O43826 429 aa11.99□□□□□ -0.49
NPHP3-203ENST00000465756 SMTNP53814 917 aa11.99□□□□□ -0.49
NPHP3-203ENST00000465756 ELMSAN1Q6PJG2 1045 aa11.99□□□□□ -0.49
NPHP3-203ENST00000465756 STXBP4Q6ZWJ1 553 aa11.99□□□□□ -0.49
NPHP3-203ENST00000465756 HERC6Q8IVU3 1022 aa11.99□□□□□ -0.49
NPHP3-203ENST00000465756 DEPTORQ8TB45 409 aa11.99□□□□□ -0.49
NPHP3-203ENST00000465756 KIFAP3Q92845 792 aa11.99□□□□□ -0.49
NPHP3-203ENST00000465756 DRC1Q96MC2 740 aa11.99□□□□□ -0.49
NPHP3-203ENST00000465756 STX6O43752 255 aa11.98□□□□□ -0.49
NPHP3-203ENST00000465756 LONP1P36776 959 aaKnown RBP11.98□□□□□ -0.49
NPHP3-203ENST00000465756 FIBCD1Q8N539 461 aa11.98□□□□□ -0.49
NPHP3-203ENST00000465756 DBF4BQ8NFT6 615 aa11.98□□□□□ -0.49
NPHP3-203ENST00000465756 URGCPQ8TCY9 931 aa11.98□□□□□ -0.49
NPHP3-203ENST00000465756 WNT8AQ9H1J5 351 aa11.98□□□□□ -0.49
NPHP3-203ENST00000465756 STK39Q9UEW8 545 aa11.98□□□□□ -0.49
NPHP3-203ENST00000465756 UTRNP46939 3433 aa11.98□□□□□ -0.49
NPHP3-203ENST00000465756 MAFO75444 373 aaPredicted RBP11.98□□□□□ -0.49
NPHP3-203ENST00000465756 TECP42680 631 aa11.98□□□□□ -0.49
NPHP3-203ENST00000465756 EMC2Q15006 297 aa11.98□□□□□ -0.49
NPHP3-203ENST00000465756 PLEKHG4Q58EX7 1191 aa11.98□□□□□ -0.49
NPHP3-203ENST00000465756 FBXO47Q5MNV8 452 aa11.98□□□□□ -0.49
NPHP3-203ENST00000465756 TNFRSF25Q93038 417 aa11.98□□□□□ -0.49
NPHP3-203ENST00000465756 TRIM6Q9C030 488 aaPredicted RBP11.98□□□□□ -0.49
NPHP3-203ENST00000465756 UBN1Q9NPG3 1134 aa11.98□□□□□ -0.49
NPHP3-203ENST00000465756 FAM13BQ9NYF5 915 aa11.98□□□□□ -0.49
NPHP3-203ENST00000465756 SSBP05455 408 aaKnown RBP eCLIP11.98□□□□□ -0.49
NPHP3-203ENST00000465756 RPA1P27694 616 aa11.98□□□□□ -0.49
NPHP3-203ENST00000465756 NLRP11P59045 1033 aaKnown RBP11.98□□□□□ -0.49
NPHP3-203ENST00000465756 CYP4A11Q02928 519 aa11.98□□□□□ -0.49
NPHP3-203ENST00000465756 PTGDRQ13258 359 aa11.98□□□□□ -0.49
NPHP3-203ENST00000465756 KCND2Q9NZV8 630 aa11.98□□□□□ -0.49
NPHP3-203ENST00000465756 TBCAO75347 108 aaKnown RBP11.97□□□□□ -0.49
NPHP3-203ENST00000465756 C22orf31O95567 290 aa11.97□□□□□ -0.49
NPHP3-203ENST00000465756 ZRSR1Q15695 479 aaKnown RBP11.97□□□□□ -0.49
NPHP3-203ENST00000465756 PCYT2Q99447 389 aa11.97□□□□□ -0.49
NPHP3-203ENST00000465756 COL4A3BPQ9Y5P4 624 aa11.97□□□□□ -0.49
NPHP3-203ENST00000465756 MYH9P35579 1960 aaKnown RBP11.97□□□□□ -0.49
NPHP3-203ENST00000465756 EFNA5P52803 228 aa11.97□□□□□ -0.49
NPHP3-203ENST00000465756 ZNF200P98182 395 aaPredicted RBP11.97□□□□□ -0.49
NPHP3-203ENST00000465756 AMPD3Q01432 767 aa11.97□□□□□ -0.49
NPHP3-203ENST00000465756 NPY5RQ15761 445 aa11.97□□□□□ -0.49
NPHP3-203ENST00000465756 TRIM71Q2Q1W2 868 aaKnown RBP11.97□□□□□ -0.49
NPHP3-203ENST00000465756 GOLGA6L4A6NEF3 574 aa11.97□□□□□ -0.49
NPHP3-203ENST00000465756 EIF4BP23588 611 aaKnown RBP11.97□□□□□ -0.49
NPHP3-203ENST00000465756 DNAJB2P25686 324 aa11.97□□□□□ -0.49
NPHP3-203ENST00000465756 NUCB2P80303 420 aa11.97□□□□□ -0.49
NPHP3-203ENST00000465756 CTTNQ14247 550 aaKnown RBP11.97□□□□□ -0.49
NPHP3-203ENST00000465756 CCDC73Q6ZRK6 1079 aa11.97□□□□□ -0.49
NPHP3-203ENST00000465756 DEFB123Q8N688 67 aa11.97□□□□□ -0.49
NPHP3-203ENST00000465756 FAM193BQ96PV7 902 aaPredicted RBP11.97□□□□□ -0.49
NPHP3-203ENST00000465756 UIMC1Q96RL1 719 aa11.97□□□□□ -0.49
NPHP3-203ENST00000465756 PUF60Q9UHX1 559 aaKnown RBP11.97□□□□□ -0.49
NPHP3-203ENST00000465756 VAV3Q9UKW4 847 aa11.97□□□□□ -0.49
NPHP3-203ENST00000465756 SRGAP2BP0DMP2 458 aa11.96□□□□□ -0.49
NPHP3-203ENST00000465756 TGS1Q96RS0 853 aaKnown RBP11.96□□□□□ -0.49
NPHP3-203ENST00000465756 PRO3102Q9H379 93 aa11.96□□□□□ -0.49
NPHP3-203ENST00000465756 RB1P06400 928 aa11.96□□□□□ -0.49
NPHP3-203ENST00000465756 PTGS1P23219 599 aa11.96□□□□□ -0.49
NPHP3-203ENST00000465756 POU5F1BQ06416 359 aa11.96□□□□□ -0.49
NPHP3-203ENST00000465756 RHPN2Q8IUC4 686 aa11.96□□□□□ -0.49
NPHP3-203ENST00000465756 DHX38Q92620 1227 aaKnown RBP11.96□□□□□ -0.49
NPHP3-203ENST00000465756 NLRP4Q96MN2 994 aa11.96□□□□□ -0.49
NPHP3-203ENST00000465756 LMAN2LQ9H0V9 348 aa11.96□□□□□ -0.49
NPHP3-203ENST00000465756 C17orf75Q9HAS0 396 aa11.96□□□□□ -0.49
NPHP3-203ENST00000465756 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.96□□□□□ -0.49
NPHP3-203ENST00000465756 WDR5P61964 334 aaKnown RBP11.96□□□□□ -0.5
NPHP3-203ENST00000465756 ADAM17P78536 824 aa11.96□□□□□ -0.5
NPHP3-203ENST00000465756 BTG3Q14201 252 aaPredicted RBP11.96□□□□□ -0.5
NPHP3-203ENST00000465756 C9orf50Q5SZB4 431 aa11.96□□□□□ -0.5
NPHP3-203ENST00000465756 TWF2Q6IBS0 349 aaKnown RBP11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms