RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 GPR135Q8IZ08 494 aa7.81□□□□□ -1.16
SMC4-205ENST00000465563 IGSF22Q8N9C0 903 aa7.81□□□□□ -1.16
SMC4-205ENST00000465563 THAP3Q8WTV1 239 aaPredicted RBP7.81□□□□□ -1.16
SMC4-205ENST00000465563 MKL1Q969V6 931 aa7.81□□□□□ -1.16
SMC4-205ENST00000465563 PMS2P1A4D2B8 440 aa7.8□□□□□ -1.16
SMC4-205ENST00000465563 MAFO75444 373 aaPredicted RBP7.8□□□□□ -1.16
SMC4-205ENST00000465563 ZNF202O95125 648 aa7.8□□□□□ -1.16
SMC4-205ENST00000465563 KCNA6P17658 529 aa7.8□□□□□ -1.16
SMC4-205ENST00000465563 HIBADHP31937 336 aaKnown RBP7.8□□□□□ -1.16
SMC4-205ENST00000465563 IRF9Q00978 393 aa7.8□□□□□ -1.16
SMC4-205ENST00000465563 LSM12Q3MHD2 195 aaKnown RBP7.8□□□□□ -1.16
SMC4-205ENST00000465563 TMEM177Q53S58 311 aa7.8□□□□□ -1.16
SMC4-205ENST00000465563 CATSPEREQ5SY80 951 aa7.8□□□□□ -1.16
SMC4-205ENST00000465563 ADGRE4PQ86SQ3 457 aa7.8□□□□□ -1.16
SMC4-205ENST00000465563 SHCBP1Q8NEM2 672 aa7.8□□□□□ -1.16
SMC4-205ENST00000465563 IL17DQ8TAD2 202 aa7.8□□□□□ -1.16
SMC4-205ENST00000465563 ERCC4Q92889 916 aaPredicted RBP7.8□□□□□ -1.16
SMC4-205ENST00000465563 MENTQ9BUN1 341 aa7.8□□□□□ -1.16
SMC4-205ENST00000465563 TLR9Q9NR96 1032 aa7.8□□□□□ -1.16
SMC4-205ENST00000465563 DGCR2P98153 550 aa7.79□□□□□ -1.16
SMC4-205ENST00000465563 FHL2Q14192 279 aa7.79□□□□□ -1.16
SMC4-205ENST00000465563 ABHD17CQ6PCB6 329 aa7.79□□□□□ -1.16
SMC4-205ENST00000465563 FGD2Q7Z6J4 655 aa7.79□□□□□ -1.16
SMC4-205ENST00000465563 PLEKHG4BQ96PX9 1271 aa7.79□□□□□ -1.16
SMC4-205ENST00000465563 VWA7Q9Y334 891 aa7.79□□□□□ -1.16
SMC4-205ENST00000465563 C1SP09871 688 aa7.78□□□□□ -1.16
SMC4-205ENST00000465563 ALDH6A1Q02252 535 aaKnown RBP7.78□□□□□ -1.16
SMC4-205ENST00000465563 IGFL4Q6B9Z1 124 aa7.78□□□□□ -1.16
SMC4-205ENST00000465563 CC2D1AQ6P1N0 951 aaPredicted RBP7.78□□□□□ -1.16
SMC4-205ENST00000465563 SGMS1Q86VZ5 419 aa7.78□□□□□ -1.16
SMC4-205ENST00000465563 FOXB1Q99853 325 aa7.78□□□□□ -1.16
SMC4-205ENST00000465563 BOCQ9BWV1 1114 aa7.78□□□□□ -1.16
SMC4-205ENST00000465563 TRIM39Q9HCM9 518 aa7.78□□□□□ -1.16
SMC4-205ENST00000465563 AURKAIP1Q9NWT8 199 aaPredicted RBP7.78□□□□□ -1.16
SMC4-205ENST00000465563 NARSO43776 548 aaKnown RBP7.77□□□□□ -1.17
SMC4-205ENST00000465563 ZBTB48P10074 688 aaPredicted RBP7.77□□□□□ -1.17
SMC4-205ENST00000465563 MCM7P33993 719 aa7.77□□□□□ -1.17
SMC4-205ENST00000465563 TGFB2P61812 414 aa7.77□□□□□ -1.17
SMC4-205ENST00000465563 C2orf27AQ580R0 203 aa7.77□□□□□ -1.17
SMC4-205ENST00000465563 OTOP1Q7RTM1 612 aa7.77□□□□□ -1.17
SMC4-205ENST00000465563 D2HGDHQ8N465 521 aa7.77□□□□□ -1.17
SMC4-205ENST00000465563 LPPQ93052 612 aa7.77□□□□□ -1.17
SMC4-205ENST00000465563 E2F7Q96AV8 911 aa7.77□□□□□ -1.17
SMC4-205ENST00000465563 TMEM176AQ96HP8 235 aa7.77□□□□□ -1.17
SMC4-205ENST00000465563 AGO3Q9H9G7 860 aaKnown RBP7.77□□□□□ -1.17
SMC4-205ENST00000465563 NCOA5Q9HCD5 579 aaKnown RBP7.77□□□□□ -1.17
SMC4-205ENST00000465563 SESN2P58004 480 aaPredicted RBP7.76□□□□□ -1.17
SMC4-205ENST00000465563 ADAM15Q13444 863 aa7.76□□□□□ -1.17
SMC4-205ENST00000465563 ARHGAP44Q17R89 818 aa7.76□□□□□ -1.17
SMC4-205ENST00000465563 KLHDC10Q6PID8 442 aa7.76□□□□□ -1.17
SMC4-205ENST00000465563 RTN4RL1Q86UN2 441 aaPredicted RBP7.76□□□□□ -1.17
SMC4-205ENST00000465563 BCL6BQ8N143 479 aaPredicted RBP7.76□□□□□ -1.17
SMC4-205ENST00000465563 CACTINQ8WUQ7 758 aaKnown RBP7.76□□□□□ -1.17
SMC4-205ENST00000465563 FOXRED1Q96CU9 486 aaPredicted RBP7.76□□□□□ -1.17
SMC4-205ENST00000465563 CTDP1Q9Y5B0 961 aaPredicted RBP7.76□□□□□ -1.17
SMC4-205ENST00000465563 PTCH2Q9Y6C5 1203 aa7.76□□□□□ -1.17
SMC4-205ENST00000465563 OVOL3O00110 214 aa7.75□□□□□ -1.17
SMC4-205ENST00000465563 FNTBP49356 437 aa7.75□□□□□ -1.17
SMC4-205ENST00000465563 RIN1Q13671 783 aa7.75□□□□□ -1.17
SMC4-205ENST00000465563 DDX53Q86TM3 631 aaKnown RBP7.75□□□□□ -1.17
SMC4-205ENST00000465563 THEMISQ8N1K5 641 aaPredicted RBP7.75□□□□□ -1.17
SMC4-205ENST00000465563 PMFBP1Q8TBY8 1022 aa7.75□□□□□ -1.17
SMC4-205ENST00000465563 RABGGTAQ92696 567 aa7.75□□□□□ -1.17
SMC4-205ENST00000465563 SAE1Q9UBE0 346 aaPredicted RBP7.75□□□□□ -1.17
SMC4-205ENST00000465563 GIT1Q9Y2X7 761 aa7.75□□□□□ -1.17
SMC4-205ENST00000465563 CAPN14A8MX76 684 aa7.74□□□□□ -1.17
SMC4-205ENST00000465563 B4E1Z4 1266 aa7.74□□□□□ -1.17
SMC4-205ENST00000465563 PLD2O14939 933 aa7.74□□□□□ -1.17
SMC4-205ENST00000465563 CYP27B1O15528 508 aa7.74□□□□□ -1.17
SMC4-205ENST00000465563 H2AFYO75367 372 aaKnown RBP7.74□□□□□ -1.17
SMC4-205ENST00000465563 KRT37O76014 449 aa7.74□□□□□ -1.17
SMC4-205ENST00000465563 MECP2P51608 486 aaKnown RBP7.74□□□□□ -1.17
SMC4-205ENST00000465563 CRB2Q5IJ48 1285 aa7.74□□□□□ -1.17
SMC4-205ENST00000465563 GFM2Q969S9 779 aaKnown RBP7.74□□□□□ -1.17
SMC4-205ENST00000465563 MPHOSPH9Q99550 1183 aa7.74□□□□□ -1.17
SMC4-205ENST00000465563 ZNF703Q9H7S9 590 aaPredicted RBP7.74□□□□□ -1.17
SMC4-205ENST00000465563 A0A1W2PRX2 142 aa7.73□□□□□ -1.17
SMC4-205ENST00000465563 KIF11P52732 1056 aa7.73□□□□□ -1.17
SMC4-205ENST00000465563 ATP2C1P98194 919 aaPredicted RBP7.73□□□□□ -1.17
SMC4-205ENST00000465563 ROM1Q03395 351 aa7.73□□□□□ -1.17
SMC4-205ENST00000465563 TUBA3CQ13748 450 aa7.73□□□□□ -1.17
SMC4-205ENST00000465563 TUBA3EQ6PEY2 450 aa7.73□□□□□ -1.17
SMC4-205ENST00000465563 LILRB2Q8N423 598 aa7.73□□□□□ -1.17
SMC4-205ENST00000465563 AMER2Q8N7J2 671 aa7.73□□□□□ -1.17
SMC4-205ENST00000465563 SLC6A15Q9H2J7 730 aa7.73□□□□□ -1.17
SMC4-205ENST00000465563 M0R2C6 588 aa7.72□□□□□ -1.17
SMC4-205ENST00000465563 PRLP01236 227 aa7.72□□□□□ -1.17
SMC4-205ENST00000465563 ADCY7P51828 1080 aa7.72□□□□□ -1.17
SMC4-205ENST00000465563 SLC6A3Q01959 620 aa7.72□□□□□ -1.17
SMC4-205ENST00000465563 SF3A1Q15459 793 aaKnown RBP7.72□□□□□ -1.17
SMC4-205ENST00000465563 ZCCHC8Q6NZY4 707 aaKnown RBP7.72□□□□□ -1.17
SMC4-205ENST00000465563 GCDHQ92947 438 aaPredicted RBP7.72□□□□□ -1.17
SMC4-205ENST00000465563 SLC7A6OSQ96CW6 309 aaPredicted RBP7.72□□□□□ -1.17
SMC4-205ENST00000465563 TRIM8Q9BZR9 551 aa7.72□□□□□ -1.17
SMC4-205ENST00000465563 ACSS2Q9NR19 701 aa7.72□□□□□ -1.17
SMC4-205ENST00000465563 SAMD15Q9P1V8 674 aa7.72□□□□□ -1.17
SMC4-205ENST00000465563 MAGEL2Q9UJ55 1249 aa7.72□□□□□ -1.17
SMC4-205ENST00000465563 DENND2AQ9ULE3 1009 aa7.72□□□□□ -1.17
SMC4-205ENST00000465563 KRTAP23-1A1A580 65 aa7.71□□□□□ -1.18
SMC4-205ENST00000465563 RAPGEF3O95398 923 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms