RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 CELF4Q9BZC1 486 aaKnown RBP22.7■■□□□ 1.22
SKA3-205ENST00000465471 DBR1Q9UK59 544 aaKnown RBP22.7■■□□□ 1.22
SKA3-205ENST00000465471 SQORQ9Y6N5 450 aa22.7■■□□□ 1.22
SKA3-205ENST00000465471 LAMA2P24043 3122 aaKnown RBP22.69■■□□□ 1.22
SKA3-205ENST00000465471 RBAK-RBAKDNI3L0D1 243 aa22.69■■□□□ 1.22
SKA3-205ENST00000465471 GPR32O75388 356 aa22.69■■□□□ 1.22
SKA3-205ENST00000465471 TMOD1P28289 359 aa22.69■■□□□ 1.22
SKA3-205ENST00000465471 CCT6AP40227 531 aaKnown RBP22.69■■□□□ 1.22
SKA3-205ENST00000465471 GRIN1Q05586 938 aa22.69■■□□□ 1.22
SKA3-205ENST00000465471 TMEM62Q0P6H9 643 aa22.69■■□□□ 1.22
SKA3-205ENST00000465471 DRP2Q13474 957 aa22.69■■□□□ 1.22
SKA3-205ENST00000465471 LPIN1Q14693 890 aa22.69■■□□□ 1.22
SKA3-205ENST00000465471 XKR9Q5GH70 373 aa22.69■■□□□ 1.22
SKA3-205ENST00000465471 HYIQ5T013 277 aa22.69■■□□□ 1.22
SKA3-205ENST00000465471 KRT79Q5XKE5 535 aa22.69■■□□□ 1.22
SKA3-205ENST00000465471 CNKSR3Q6P9H4 555 aa22.69■■□□□ 1.22
SKA3-205ENST00000465471 EXOC8Q8IYI6 725 aa22.69■■□□□ 1.22
SKA3-205ENST00000465471 PIGOQ8TEQ8 1089 aa22.69■■□□□ 1.22
SKA3-205ENST00000465471 RNPC3Q96LT9 517 aaKnown RBP22.69■■□□□ 1.22
SKA3-205ENST00000465471 NACC1Q96RE7 527 aa22.69■■□□□ 1.22
SKA3-205ENST00000465471 JPH2Q9BR39 696 aaPredicted RBP22.69■■□□□ 1.22
SKA3-205ENST00000465471 MICAL3Q7RTP6 2002 aa22.69■■□□□ 1.22
SKA3-205ENST00000465471 M0QZ92 97 aa22.68■■□□□ 1.22
SKA3-205ENST00000465471 BAIAP3O94812 1187 aa22.68■■□□□ 1.22
SKA3-205ENST00000465471 VTNP04004 478 aa22.68■■□□□ 1.22
SKA3-205ENST00000465471 CDC25AP30304 524 aa22.68■■□□□ 1.22
SKA3-205ENST00000465471 DDIT3P35638 169 aa22.68■■□□□ 1.22
SKA3-205ENST00000465471 LONP1P36776 959 aaKnown RBP22.68■■□□□ 1.22
SKA3-205ENST00000465471 SLC39A14Q15043 492 aa22.68■■□□□ 1.22
SKA3-205ENST00000465471 FOXD4L5Q5VV16 416 aaPredicted RBP22.68■■□□□ 1.22
SKA3-205ENST00000465471 OTOP2Q7RTS6 562 aa22.68■■□□□ 1.22
SKA3-205ENST00000465471 ZNF710Q8N1W2 664 aa22.68■■□□□ 1.22
SKA3-205ENST00000465471 FOXD4L4Q8WXT5 416 aaPredicted RBP22.68■■□□□ 1.22
SKA3-205ENST00000465471 SLC7A3Q8WY07 619 aa22.68■■□□□ 1.22
SKA3-205ENST00000465471 MAP7D2Q96T17 732 aa22.68■■□□□ 1.22
SKA3-205ENST00000465471 SUGCTQ9HAC7 445 aa22.68■■□□□ 1.22
SKA3-205ENST00000465471 XPNPEP1Q9NQW7 623 aa22.68■■□□□ 1.22
SKA3-205ENST00000465471 CXXC1Q9P0U4 656 aaPredicted RBP22.68■■□□□ 1.22
SKA3-205ENST00000465471 FBXO2Q9UK22 296 aaPredicted RBP22.68■■□□□ 1.22
SKA3-205ENST00000465471 PTPRSQ13332 1948 aa22.67■■□□□ 1.22
SKA3-205ENST00000465471 GAS2O43903 313 aaKnown RBP22.67■■□□□ 1.22
SKA3-205ENST00000465471 GHRP10912 638 aa22.67■■□□□ 1.22
SKA3-205ENST00000465471 ACTN1P12814 892 aa22.67■■□□□ 1.22
SKA3-205ENST00000465471 POLGP54098 1239 aaPredicted RBP22.67■■□□□ 1.22
SKA3-205ENST00000465471 EMC2Q15006 297 aa22.67■■□□□ 1.22
SKA3-205ENST00000465471 TSHZ1Q6ZSZ6 1077 aa22.67■■□□□ 1.22
SKA3-205ENST00000465471 USP38Q8NB14 1042 aa22.67■■□□□ 1.22
SKA3-205ENST00000465471 DBF4BQ8NFT6 615 aa22.67■■□□□ 1.22
SKA3-205ENST00000465471 ZNF396Q96N95 335 aaPredicted RBP22.67■■□□□ 1.22
SKA3-205ENST00000465471 ADAMTS10Q9H324 1103 aa22.67■■□□□ 1.22
SKA3-205ENST00000465471 CDHR5Q9HBB8 845 aa22.67■■□□□ 1.22
SKA3-205ENST00000465471 AKT3Q9Y243 479 aa22.67■■□□□ 1.22
SKA3-205ENST00000465471 SRPRBQ9Y5M8 271 aaKnown RBP22.67■■□□□ 1.22
SKA3-205ENST00000465471 A0A087WWV3 80 aa22.66■■□□□ 1.22
SKA3-205ENST00000465471 SLC26A4O43511 780 aa22.66■■□□□ 1.22
SKA3-205ENST00000465471 DGAT1O75907 488 aa22.66■■□□□ 1.22
SKA3-205ENST00000465471 GPC3P51654 580 aa22.66■■□□□ 1.22
SKA3-205ENST00000465471 CEBPZQ03701 1054 aaKnown RBP22.66■■□□□ 1.22
SKA3-205ENST00000465471 KIZQ2M2Z5 673 aa22.66■■□□□ 1.22
SKA3-205ENST00000465471 KCTD17Q8N5Z5 321 aa22.66■■□□□ 1.22
SKA3-205ENST00000465471 LINC00301Q8NCQ3 95 aa22.66■■□□□ 1.22
SKA3-205ENST00000465471 TMEM40Q8WWA1 233 aa22.66■■□□□ 1.22
SKA3-205ENST00000465471 MTIF3Q9H2K0 278 aaKnown RBP22.66■■□□□ 1.22
SKA3-205ENST00000465471 AGO3Q9H9G7 860 aaKnown RBP22.66■■□□□ 1.22
SKA3-205ENST00000465471 DDX19AQ9NUU7 478 aaKnown RBP22.66■■□□□ 1.22
SKA3-205ENST00000465471 KIAA1024Q9UPX6 916 aa22.66■■□□□ 1.22
SKA3-205ENST00000465471 MARCKSP29966 332 aaPredicted RBP22.65■■□□□ 1.22
SKA3-205ENST00000465471 DNM2P50570 870 aa22.65■■□□□ 1.22
SKA3-205ENST00000465471 CRYBB1P53674 252 aaPredicted RBP22.65■■□□□ 1.22
SKA3-205ENST00000465471 ATL3Q6DD88 541 aa22.65■■□□□ 1.22
SKA3-205ENST00000465471 SEPT8Q92599 483 aa22.65■■□□□ 1.22
SKA3-205ENST00000465471 APBB2Q92870 758 aa22.65■■□□□ 1.22
SKA3-205ENST00000465471 PNMA5Q96PV4 448 aa22.65■■□□□ 1.22
SKA3-205ENST00000465471 IFIH1Q9BYX4 1025 aaKnown RBP22.65■■□□□ 1.22
SKA3-205ENST00000465471 ABHD14A-ACY1A0A1B0GW23 586 aa22.64■■□□□ 1.21
SKA3-205ENST00000465471 YEATS4O95619 227 aa22.64■■□□□ 1.21
SKA3-205ENST00000465471 NLRP11P59045 1033 aaKnown RBP22.64■■□□□ 1.21
SKA3-205ENST00000465471 GRB10Q13322 594 aa22.64■■□□□ 1.21
SKA3-205ENST00000465471 TMEM119Q4V9L6 283 aa22.64■■□□□ 1.21
SKA3-205ENST00000465471 KCNK18Q7Z418 384 aa22.64■■□□□ 1.21
SKA3-205ENST00000465471 OSMRQ99650 979 aa22.64■■□□□ 1.21
SKA3-205ENST00000465471 MTRQ99707 1265 aa22.64■■□□□ 1.21
SKA3-205ENST00000465471 ATP6V0A4Q9HBG4 840 aa22.64■■□□□ 1.21
SKA3-205ENST00000465471 SUCLA2Q9P2R7 463 aaPredicted RBP22.64■■□□□ 1.21
SKA3-205ENST00000465471 SOX1O00570 391 aaPredicted RBP22.63■■□□□ 1.21
SKA3-205ENST00000465471 EFCAB14O75071 495 aa22.63■■□□□ 1.21
SKA3-205ENST00000465471 WDR5P61964 334 aaKnown RBP22.63■■□□□ 1.21
SKA3-205ENST00000465471 CDC42EP1Q00587 391 aa22.63■■□□□ 1.21
SKA3-205ENST00000465471 CABP7Q86V35 215 aa22.63■■□□□ 1.21
SKA3-205ENST00000465471 TCP11Q8WWU5 503 aa22.63■■□□□ 1.21
SKA3-205ENST00000465471 TMEM143Q96AN5 459 aa22.63■■□□□ 1.21
SKA3-205ENST00000465471 CCDC43Q96MW1 224 aaKnown RBP22.63■■□□□ 1.21
SKA3-205ENST00000465471 PPP1R16BQ96T49 567 aa22.63■■□□□ 1.21
SKA3-205ENST00000465471 NT5C3AQ9H0P0 336 aa22.63■■□□□ 1.21
SKA3-205ENST00000465471 CSRNP2Q9H175 543 aa22.63■■□□□ 1.21
SKA3-205ENST00000465471 BMP2KQ9NSY1 1161 aaPredicted RBP22.63■■□□□ 1.21
SKA3-205ENST00000465471 TFIP11Q9UBB9 837 aaKnown RBP22.63■■□□□ 1.21
SKA3-205ENST00000465471 E9PMD0 336 aa22.62■■□□□ 1.21
SKA3-205ENST00000465471 PPP6R2O75170 966 aa22.62■■□□□ 1.21
SKA3-205ENST00000465471 EYA4O95677 639 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 641.4 ms