RNA–Protein interactions for RNA: ENST00000465421.5

SIK3-207, Transcript of SIK family kinase 3, humanhuman

TSL 2

Gene SIK3, Length 3,459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-207ENST00000465421 FAM228BP0C875 321 aa7.03□□□□□ -1.28
SIK3-207ENST00000465421 ITGA4P13612 1032 aa7.03□□□□□ -1.28
SIK3-207ENST00000465421 RPS6KA1Q15418 735 aa7.03□□□□□ -1.28
SIK3-207ENST00000465421 SLC9C1Q4G0N8 1177 aa7.03□□□□□ -1.28
SIK3-207ENST00000465421 SBK1Q52WX2 424 aa7.03□□□□□ -1.28
SIK3-207ENST00000465421 ZNF384Q8TF68 577 aa7.03□□□□□ -1.28
SIK3-207ENST00000465421 UTP4Q969X6 686 aaKnown RBP7.03□□□□□ -1.28
SIK3-207ENST00000465421 TSC22D3Q99576 134 aa7.03□□□□□ -1.28
SIK3-207ENST00000465421 PIDD1Q9HB75 910 aa7.03□□□□□ -1.28
SIK3-207ENST00000465421 FAM114A2Q9NRY5 505 aa7.03□□□□□ -1.28
SIK3-207ENST00000465421 IRAK4Q9NWZ3 460 aa7.03□□□□□ -1.28
SIK3-207ENST00000465421 NKX1-2Q9UD57 310 aaPredicted RBP7.03□□□□□ -1.28
SIK3-207ENST00000465421 PRKAG3Q9UGI9 489 aa7.03□□□□□ -1.28
SIK3-207ENST00000465421 AMACRQ9UHK6 382 aa7.03□□□□□ -1.28
SIK3-207ENST00000465421 TTI1O43156 1089 aa7.03□□□□□ -1.28
SIK3-207ENST00000465421 NMT2O60551 498 aa7.03□□□□□ -1.28
SIK3-207ENST00000465421 PDIA5Q14554 519 aa7.03□□□□□ -1.28
SIK3-207ENST00000465421 TAF11Q15544 211 aa7.03□□□□□ -1.28
SIK3-207ENST00000465421 PFKFB3Q16875 520 aaPredicted RBP7.03□□□□□ -1.28
SIK3-207ENST00000465421 HOOK3Q86VS8 718 aa7.03□□□□□ -1.28
SIK3-207ENST00000465421 GBP7Q8N8V2 638 aaPredicted RBP7.03□□□□□ -1.28
SIK3-207ENST00000465421 CNBD1Q8NA66 436 aa7.03□□□□□ -1.28
SIK3-207ENST00000465421 ANKLE1Q8NAG6 615 aa7.03□□□□□ -1.28
SIK3-207ENST00000465421 RNF25Q96BH1 459 aaPredicted RBP7.03□□□□□ -1.28
SIK3-207ENST00000465421 AGAP3Q96P47 875 aa7.03□□□□□ -1.28
SIK3-207ENST00000465421 NUCKS1Q9H1E3 243 aaKnown RBP7.03□□□□□ -1.28
SIK3-207ENST00000465421 GOLPH3Q9H4A6 298 aa7.03□□□□□ -1.28
SIK3-207ENST00000465421 NLRC4Q9NPP4 1024 aa7.03□□□□□ -1.28
SIK3-207ENST00000465421 WDR35Q9P2L0 1181 aa7.03□□□□□ -1.28
SIK3-207ENST00000465421 E7ENQ6 273 aa7.02□□□□□ -1.29
SIK3-207ENST00000465421 RPS6KA4O75676 772 aa7.02□□□□□ -1.29
SIK3-207ENST00000465421 RNF8O76064 485 aa7.02□□□□□ -1.29
SIK3-207ENST00000465421 SCG2P13521 617 aa7.02□□□□□ -1.29
SIK3-207ENST00000465421 PLCG1P19174 1290 aa7.02□□□□□ -1.29
SIK3-207ENST00000465421 IFI35P80217 286 aaPredicted RBP7.02□□□□□ -1.29
SIK3-207ENST00000465421 ADAM9Q13443 819 aa7.02□□□□□ -1.29
SIK3-207ENST00000465421 CNGA2Q16280 664 aa7.02□□□□□ -1.29
SIK3-207ENST00000465421 PPP1R15BQ5SWA1 713 aa7.02□□□□□ -1.29
SIK3-207ENST00000465421 FAM83BQ5T0W9 1011 aa7.02□□□□□ -1.29
SIK3-207ENST00000465421 SFMBT2Q5VUG0 894 aa7.02□□□□□ -1.29
SIK3-207ENST00000465421 DTHD1Q6ZMT9 781 aa7.02□□□□□ -1.29
SIK3-207ENST00000465421 C3orf67Q6ZVT6 689 aa7.02□□□□□ -1.29
SIK3-207ENST00000465421 SLFN11Q7Z7L1 901 aa7.02□□□□□ -1.29
SIK3-207ENST00000465421 ADGRA1Q86SQ6 560 aa7.02□□□□□ -1.29
SIK3-207ENST00000465421 KSR1Q8IVT5 923 aa7.02□□□□□ -1.29
SIK3-207ENST00000465421 KIF2BQ8N4N8 673 aa7.02□□□□□ -1.29
SIK3-207ENST00000465421 METTL13Q8N6R0 699 aa7.02□□□□□ -1.29
SIK3-207ENST00000465421 TBC1D5Q92609 795 aa7.02□□□□□ -1.29
SIK3-207ENST00000465421 GPKOWQ92917 476 aaPredicted RBP eCLIP7.02□□□□□ -1.29
SIK3-207ENST00000465421 SYT15Q9BQS2 421 aa7.02□□□□□ -1.29
SIK3-207ENST00000465421 TMEM109Q9BVC6 243 aa7.02□□□□□ -1.29
SIK3-207ENST00000465421 NYXQ9GZU5 481 aa7.02□□□□□ -1.29
SIK3-207ENST00000465421 AIPL1Q9NZN9 384 aa7.02□□□□□ -1.29
SIK3-207ENST00000465421 NENFQ9UMX5 172 aa7.02□□□□□ -1.29
SIK3-207ENST00000465421 NIP7Q9Y221 180 aaKnown RBP eCLIP7.02□□□□□ -1.29
SIK3-207ENST00000465421 USP15Q9Y4E8 981 aaPredicted RBP7.02□□□□□ -1.29
SIK3-207ENST00000465421 GOLGA6L10A0A0M3HER8 536 aa7.02□□□□□ -1.29
SIK3-207ENST00000465421 O00370 1275 aa7.02□□□□□ -1.29
SIK3-207ENST00000465421 DDAH1O94760 285 aa7.02□□□□□ -1.29
SIK3-207ENST00000465421 CALM1P0DP23 149 aa7.02□□□□□ -1.29
SIK3-207ENST00000465421 CALM2P0DP24 149 aa7.02□□□□□ -1.29
SIK3-207ENST00000465421 CALM3P0DP25 149 aa7.02□□□□□ -1.29
SIK3-207ENST00000465421 ATP6V1C1P21283 382 aa7.02□□□□□ -1.29
SIK3-207ENST00000465421 CNGA1P29973 690 aa7.02□□□□□ -1.29
SIK3-207ENST00000465421 TM4SF1P30408 202 aa7.02□□□□□ -1.29
SIK3-207ENST00000465421 SKIV2L2P42285 1042 aaKnown RBP7.02□□□□□ -1.29
SIK3-207ENST00000465421 MRPS35P82673 323 aaKnown RBP7.02□□□□□ -1.29
SIK3-207ENST00000465421 EVX2Q03828 476 aa7.02□□□□□ -1.29
SIK3-207ENST00000465421 KLRC3Q07444 240 aa7.02□□□□□ -1.29
SIK3-207ENST00000465421 DIXDC1Q155Q3 683 aa7.02□□□□□ -1.29
SIK3-207ENST00000465421 ERFEQ4G0M1 354 aa7.02□□□□□ -1.29
SIK3-207ENST00000465421 CCDC38Q502W7 563 aa7.02□□□□□ -1.29
SIK3-207ENST00000465421 FAM47AQ5JRC9 791 aa7.02□□□□□ -1.29
SIK3-207ENST00000465421 TMCO4Q5TGY1 634 aa7.02□□□□□ -1.29
SIK3-207ENST00000465421 NUGGCQ68CJ6 796 aa7.02□□□□□ -1.29
SIK3-207ENST00000465421 COL23A1Q86Y22 540 aaPredicted RBP7.02□□□□□ -1.29
SIK3-207ENST00000465421 FITM2Q8N6M3 262 aa7.02□□□□□ -1.29
SIK3-207ENST00000465421 ATL2Q8NHH9 583 aa7.02□□□□□ -1.29
SIK3-207ENST00000465421 ESR2Q92731 530 aa7.02□□□□□ -1.29
SIK3-207ENST00000465421 TAF4BQ92750 862 aa7.02□□□□□ -1.29
SIK3-207ENST00000465421 KLHL29Q96CT2 875 aa7.02□□□□□ -1.29
SIK3-207ENST00000465421 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.02□□□□□ -1.29
SIK3-207ENST00000465421 CELF4Q9BZC1 486 aaKnown RBP7.02□□□□□ -1.29
SIK3-207ENST00000465421 NACAP1Q9BZK3 213 aa7.02□□□□□ -1.29
SIK3-207ENST00000465421 TRIM31Q9BZY9 425 aa7.02□□□□□ -1.29
SIK3-207ENST00000465421 IRF2BPLQ9H1B7 796 aa7.02□□□□□ -1.29
SIK3-207ENST00000465421 PABPC3Q9H361 631 aaKnown RBP7.02□□□□□ -1.29
SIK3-207ENST00000465421 GGT7Q9UJ14 662 aa7.02□□□□□ -1.29
SIK3-207ENST00000465421 PNMA3Q9UL41 463 aa7.02□□□□□ -1.29
SIK3-207ENST00000465421 TTC7AQ9ULT0 858 aaPredicted RBP7.02□□□□□ -1.29
SIK3-207ENST00000465421 MINPP1Q9UNW1 487 aa7.02□□□□□ -1.29
SIK3-207ENST00000465421 TRIM33Q9UPN9 1127 aa7.02□□□□□ -1.29
SIK3-207ENST00000465421 ATP8A1Q9Y2Q0 1164 aa7.02□□□□□ -1.29
SIK3-207ENST00000465421 CEP104O60308 925 aa7.02□□□□□ -1.29
SIK3-207ENST00000465421 FLOT1O75955 427 aa7.02□□□□□ -1.29
SIK3-207ENST00000465421 AGTP01019 485 aa7.02□□□□□ -1.29
SIK3-207ENST00000465421 BCAMP50895 628 aa7.02□□□□□ -1.29
SIK3-207ENST00000465421 PDE6CP51160 858 aa7.02□□□□□ -1.29
SIK3-207ENST00000465421 RBM5P52756 815 aaKnown RBP eCLIP7.02□□□□□ -1.29
SIK3-207ENST00000465421 LAMB3Q13751 1172 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms