RNA–Protein interactions for RNA: ENST00000465245.1

TRA2B-208, Transcript of transformer 2 beta homolog, human

TSL 3

Gene TRA2B, Length 634 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRA2B-208	ENST00000465245	CASC1	Q6TDU7	716 aa		13.72	□□□□□ -0.21
TRA2B-208	ENST00000465245	KCNT2	Q6UVM3	1135 aa		13.72	□□□□□ -0.21
TRA2B-208	ENST00000465245	FAM228A	Q86W67	206 aa		13.72	□□□□□ -0.21
TRA2B-208	ENST00000465245	KIAA0319L	Q8IZA0	1049 aa		13.72	□□□□□ -0.21
TRA2B-208	ENST00000465245	LRRC43	Q8N309	656 aa		13.72	□□□□□ -0.21
TRA2B-208	ENST00000465245	CYP2W1	Q8TAV3	490 aa		13.72	□□□□□ -0.21
TRA2B-208	ENST00000465245	RUFY2	Q8WXA3	655 aa		13.72	□□□□□ -0.21
TRA2B-208	ENST00000465245	ZNF558	Q96NG5	402 aa		13.72	□□□□□ -0.21
TRA2B-208	ENST00000465245	OSMR	Q99650	979 aa		13.72	□□□□□ -0.21
TRA2B-208	ENST00000465245	TMEM117	Q9H0C3	514 aa		13.72	□□□□□ -0.21
TRA2B-208	ENST00000465245	MFSD1	Q9H3U5	465 aa		13.72	□□□□□ -0.21
TRA2B-208	ENST00000465245	SMOC2	Q9H3U7	446 aa		13.72	□□□□□ -0.21
TRA2B-208	ENST00000465245	ELAC1	Q9H777	363 aa	Known RBP	13.72	□□□□□ -0.21
TRA2B-208	ENST00000465245	HCFC2	Q9Y5Z7	792 aa		13.72	□□□□□ -0.21
TRA2B-208	ENST00000465245	CCDC69	A6NI79	296 aa		13.71	□□□□□ -0.21
TRA2B-208	ENST00000465245	DDX39A	O00148	427 aa	Known RBP	13.71	□□□□□ -0.21
TRA2B-208	ENST00000465245	HOXA2	O43364	376 aa		13.71	□□□□□ -0.21
TRA2B-208	ENST00000465245	ATG7	O95352	703 aa		13.71	□□□□□ -0.21
TRA2B-208	ENST00000465245	IGHD	P01880	384 aa		13.71	□□□□□ -0.21
TRA2B-208	ENST00000465245	AR	P10275	920 aa		13.71	□□□□□ -0.21
TRA2B-208	ENST00000465245	CA8	P35219	290 aa		13.71	□□□□□ -0.21
TRA2B-208	ENST00000465245	CRYBB1	P53674	252 aa	Predicted RBP	13.71	□□□□□ -0.21
TRA2B-208	ENST00000465245	ITIH3	Q06033	890 aa		13.71	□□□□□ -0.21
TRA2B-208	ENST00000465245	ITGB3BP	Q13352	177 aa	Predicted RBP	13.71	□□□□□ -0.21
TRA2B-208	ENST00000465245	AAMP	Q13685	434 aa		13.71	□□□□□ -0.21
TRA2B-208	ENST00000465245	SMC1A	Q14683	1233 aa	Known RBP	13.71	□□□□□ -0.21
TRA2B-208	ENST00000465245	KIZ	Q2M2Z5	673 aa		13.71	□□□□□ -0.21
TRA2B-208	ENST00000465245	FAM160B1	Q5W0V3	765 aa		13.71	□□□□□ -0.21
TRA2B-208	ENST00000465245	MCTP2	Q6DN12	878 aa		13.71	□□□□□ -0.21
TRA2B-208	ENST00000465245	ASTL	Q6HA08	431 aa	Predicted RBP	13.71	□□□□□ -0.21
TRA2B-208	ENST00000465245	LRRC55	Q6ZSA7	311 aa		13.71	□□□□□ -0.21
TRA2B-208	ENST00000465245	HEATR3	Q7Z4Q2	680 aa		13.71	□□□□□ -0.21
TRA2B-208	ENST00000465245	FRMD5	Q7Z6J6	570 aa		13.71	□□□□□ -0.21
TRA2B-208	ENST00000465245	ABI1	Q8IZP0	508 aa		13.71	□□□□□ -0.21
TRA2B-208	ENST00000465245	TDRD5	Q8NAT2	981 aa	Known RBP	13.71	□□□□□ -0.21
TRA2B-208	ENST00000465245	NKD2	Q969F2	451 aa	Predicted RBP	13.71	□□□□□ -0.21
TRA2B-208	ENST00000465245	ADAM7	Q9H2U9	754 aa		13.71	□□□□□ -0.21
TRA2B-208	ENST00000465245	CACNA1A	O00555	2505 aa		13.7	□□□□□ -0.22
TRA2B-208	ENST00000465245	PRC1	O43663	620 aa		13.7	□□□□□ -0.22
TRA2B-208	ENST00000465245	VTN	P04004	478 aa		13.7	□□□□□ -0.22
TRA2B-208	ENST00000465245	ASGR2	P07307	311 aa		13.7	□□□□□ -0.22
TRA2B-208	ENST00000465245	GSPT1	P15170	499 aa	Known RBP	13.7	□□□□□ -0.22
TRA2B-208	ENST00000465245	MTHFR	P42898	656 aa		13.7	□□□□□ -0.22
TRA2B-208	ENST00000465245	FAM189B	P81408	668 aa		13.7	□□□□□ -0.22
TRA2B-208	ENST00000465245	DSC3	Q14574	896 aa		13.7	□□□□□ -0.22
TRA2B-208	ENST00000465245	CEP55	Q53EZ4	464 aa		13.7	□□□□□ -0.22
TRA2B-208	ENST00000465245	ZNF484	Q5JVG2	852 aa		13.7	□□□□□ -0.22
TRA2B-208	ENST00000465245	PDXDC2P	Q6P474	469 aa		13.7	□□□□□ -0.22
TRA2B-208	ENST00000465245	ERMP1	Q7Z2K6	904 aa		13.7	□□□□□ -0.22
TRA2B-208	ENST00000465245	CCDC60	Q8IWA6	550 aa	Predicted RBP	13.7	□□□□□ -0.22
TRA2B-208	ENST00000465245	CCDC82	Q8N4S0	544 aa		13.7	□□□□□ -0.22
TRA2B-208	ENST00000465245	PGBD1	Q96JS3	809 aa		13.7	□□□□□ -0.22
TRA2B-208	ENST00000465245	CASD1	Q96PB1	797 aa		13.7	□□□□□ -0.22
TRA2B-208	ENST00000465245	AGO4	Q9HCK5	861 aa	Known RBP	13.7	□□□□□ -0.22
TRA2B-208	ENST00000465245	SPG21	Q9NZD8	308 aa		13.7	□□□□□ -0.22
TRA2B-208	ENST00000465245	C2orf16	Q68DN1	1984 aa		13.69	□□□□□ -0.22
TRA2B-208	ENST00000465245	DNAH14	Q0VDD8	3507 aa		13.69	□□□□□ -0.22
TRA2B-208	ENST00000465245	IGKV6D-21	A0A0A0MT36	114 aa		13.69	□□□□□ -0.22
TRA2B-208	ENST00000465245	C2orf71	A6NGG8	1288 aa		13.69	□□□□□ -0.22
TRA2B-208	ENST00000465245	ZBTB42	B2RXF5	422 aa		13.69	□□□□□ -0.22
TRA2B-208	ENST00000465245	CCNE2	O96020	404 aa		13.69	□□□□□ -0.22
TRA2B-208	ENST00000465245	WEE2	P0C1S8	567 aa		13.69	□□□□□ -0.22
TRA2B-208	ENST00000465245	CALM1	P0DP23	149 aa		13.69	□□□□□ -0.22
TRA2B-208	ENST00000465245	CALM2	P0DP24	149 aa		13.69	□□□□□ -0.22
TRA2B-208	ENST00000465245	CALM3	P0DP25	149 aa		13.69	□□□□□ -0.22
TRA2B-208	ENST00000465245	ID4	P47928	161 aa		13.69	□□□□□ -0.22
TRA2B-208	ENST00000465245	RARS2	Q5T160	578 aa	Known RBP	13.69	□□□□□ -0.22
TRA2B-208	ENST00000465245	ABHD15	Q6UXT9	468 aa		13.69	□□□□□ -0.22
TRA2B-208	ENST00000465245	RAB11FIP4	Q86YS3	637 aa		13.69	□□□□□ -0.22
TRA2B-208	ENST00000465245	TMTC2	Q8N394	836 aa		13.69	□□□□□ -0.22
TRA2B-208	ENST00000465245	METTL13	Q8N6R0	699 aa		13.69	□□□□□ -0.22
TRA2B-208	ENST00000465245	RNF169	Q8NCN4	708 aa		13.69	□□□□□ -0.22
TRA2B-208	ENST00000465245	MTA3	Q9BTC8	594 aa		13.69	□□□□□ -0.22
TRA2B-208	ENST00000465245	ANO3	Q9BYT9	981 aa		13.69	□□□□□ -0.22
TRA2B-208	ENST00000465245	ZNF302	Q9NR11	478 aa		13.69	□□□□□ -0.22
TRA2B-208	ENST00000465245	RNF19A	Q9NV58	838 aa		13.69	□□□□□ -0.22
TRA2B-208	ENST00000465245	SH2B2	O14492	632 aa	Predicted RBP	13.68	□□□□□ -0.22
TRA2B-208	ENST00000465245	CLASP2	O75122	1294 aa	Known RBP	13.68	□□□□□ -0.22
TRA2B-208	ENST00000465245	GPR32	O75388	356 aa		13.68	□□□□□ -0.22
TRA2B-208	ENST00000465245	C22orf31	O95567	290 aa		13.68	□□□□□ -0.22
TRA2B-208	ENST00000465245	ZSCAN20	P17040	1043 aa	Predicted RBP	13.68	□□□□□ -0.22
TRA2B-208	ENST00000465245	CHML	P26374	656 aa		13.68	□□□□□ -0.22
TRA2B-208	ENST00000465245	CLCN5	P51795	746 aa		13.68	□□□□□ -0.22
TRA2B-208	ENST00000465245	NAPA	P54920	295 aa		13.68	□□□□□ -0.22
TRA2B-208	ENST00000465245	TTC22	Q5TAA0	569 aa		13.68	□□□□□ -0.22
TRA2B-208	ENST00000465245	KIAA1841	Q6NSI8	718 aa		13.68	□□□□□ -0.22
TRA2B-208	ENST00000465245	CKAP2L	Q8IYA6	745 aa		13.68	□□□□□ -0.22
TRA2B-208	ENST00000465245	ZDHHC14	Q8IZN3	488 aa		13.68	□□□□□ -0.22
TRA2B-208	ENST00000465245	ADSSL1	Q8N142	457 aa		13.68	□□□□□ -0.22
TRA2B-208	ENST00000465245	SLC39A11	Q8N1S5	342 aa		13.68	□□□□□ -0.22
TRA2B-208	ENST00000465245	MRPL43	Q8N983	215 aa	Known RBP	13.68	□□□□□ -0.22
TRA2B-208	ENST00000465245	FLCN	Q8NFG4	579 aa		13.68	□□□□□ -0.22
TRA2B-208	ENST00000465245	TMEM87B	Q96K49	555 aa		13.68	□□□□□ -0.22
TRA2B-208	ENST00000465245	DZANK1	Q9NVP4	752 aa		13.68	□□□□□ -0.22
TRA2B-208	ENST00000465245	LIMD1	Q9UGP4	676 aa		13.68	□□□□□ -0.22
TRA2B-208	ENST00000465245	DBR1	Q9UK59	544 aa	Known RBP	13.68	□□□□□ -0.22
TRA2B-208	ENST00000465245	MEIS1	O00470	390 aa		13.67	□□□□□ -0.22
TRA2B-208	ENST00000465245	FOS	P01100	380 aa	Predicted RBP	13.67	□□□□□ -0.22
TRA2B-208	ENST00000465245	MCM5	P33992	734 aa		13.67	□□□□□ -0.22
TRA2B-208	ENST00000465245	ZNF76	P36508	570 aa		13.67	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms