RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 ARHGEF35A5YM69 484 aa18.79■□□□□ 0.6
EXOSC3-203ENST00000465229 DNM1LO00429 736 aa18.79■□□□□ 0.6
EXOSC3-203ENST00000465229 CABYRO75952 493 aa18.79■□□□□ 0.6
EXOSC3-203ENST00000465229 CDC25BP30305 580 aa18.79■□□□□ 0.6
EXOSC3-203ENST00000465229 AFMP43652 599 aa18.79■□□□□ 0.6
EXOSC3-203ENST00000465229 GJA8P48165 433 aa18.79■□□□□ 0.6
EXOSC3-203ENST00000465229 PLCB2Q00722 1185 aa18.79■□□□□ 0.6
EXOSC3-203ENST00000465229 MTERF2Q49AM1 385 aa18.79■□□□□ 0.6
EXOSC3-203ENST00000465229 ARSHQ5FYA8 562 aa18.79■□□□□ 0.6
EXOSC3-203ENST00000465229 NT5DC1Q5TFE4 455 aa18.79■□□□□ 0.6
EXOSC3-203ENST00000465229 RINT1Q6NUQ1 792 aa18.79■□□□□ 0.6
EXOSC3-203ENST00000465229 PADI6Q6TGC4 694 aa18.79■□□□□ 0.6
EXOSC3-203ENST00000465229 PPP1R13LQ8WUF5 828 aa18.79■□□□□ 0.6
EXOSC3-203ENST00000465229 RTN4Q9NQC3 1192 aaKnown RBP18.79■□□□□ 0.6
EXOSC3-203ENST00000465229 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.79■□□□□ 0.6
EXOSC3-203ENST00000465229 PHF24Q9UPV7 400 aa18.79■□□□□ 0.6
EXOSC3-203ENST00000465229 MYMKA6NI61 221 aa18.78■□□□□ 0.6
EXOSC3-203ENST00000465229 KBTBD13C9JR72 458 aa18.78■□□□□ 0.6
EXOSC3-203ENST00000465229 ZNF500O60304 480 aaPredicted RBP18.78■□□□□ 0.6
EXOSC3-203ENST00000465229 CYP11B2P19099 503 aa18.78■□□□□ 0.6
EXOSC3-203ENST00000465229 ZNF75DP51815 510 aa18.78■□□□□ 0.6
EXOSC3-203ENST00000465229 NBPF20Q3BBV1 942 aa18.78■□□□□ 0.6
EXOSC3-203ENST00000465229 DPCR1Q3MIW9 517 aa18.78■□□□□ 0.6
EXOSC3-203ENST00000465229 C1orf186Q6ZWK4 172 aa18.78■□□□□ 0.6
EXOSC3-203ENST00000465229 GPBP1Q86WP2 473 aa18.78■□□□□ 0.6
EXOSC3-203ENST00000465229 ERCC4Q92889 916 aaPredicted RBP18.78■□□□□ 0.6
EXOSC3-203ENST00000465229 CCDC43Q96MW1 224 aaKnown RBP18.78■□□□□ 0.6
EXOSC3-203ENST00000465229 RUSC1Q9BVN2 902 aa18.78■□□□□ 0.6
EXOSC3-203ENST00000465229 GRIN2DO15399 1336 aa18.78■□□□□ 0.6
EXOSC3-203ENST00000465229 IKBKBO14920 756 aa18.78■□□□□ 0.6
EXOSC3-203ENST00000465229 SMIM10L2AP0DMW4 78 aa18.78■□□□□ 0.6
EXOSC3-203ENST00000465229 SMIM10L2BP0DMW5 78 aa18.78■□□□□ 0.6
EXOSC3-203ENST00000465229 CASP1P29466 404 aa18.78■□□□□ 0.6
EXOSC3-203ENST00000465229 MNX1P50219 401 aaPredicted RBP18.78■□□□□ 0.6
EXOSC3-203ENST00000465229 PPFIA1Q13136 1202 aa18.78■□□□□ 0.6
EXOSC3-203ENST00000465229 ZNF484Q5JVG2 852 aa18.78■□□□□ 0.6
EXOSC3-203ENST00000465229 TRAPPC12Q8WVT3 735 aa18.78■□□□□ 0.6
EXOSC3-203ENST00000465229 TMEM106CQ9BVX2 250 aa18.78■□□□□ 0.6
EXOSC3-203ENST00000465229 SETD4Q9NVD3 440 aa18.78■□□□□ 0.6
EXOSC3-203ENST00000465229 A0A1W2PQ45 241 aaPredicted RBP18.77■□□□□ 0.6
EXOSC3-203ENST00000465229 A0A1W2PQY0 241 aa18.77■□□□□ 0.6
EXOSC3-203ENST00000465229 SMTNL1A8MU46 457 aa18.77■□□□□ 0.6
EXOSC3-203ENST00000465229 AMPD3Q01432 767 aa18.77■□□□□ 0.6
EXOSC3-203ENST00000465229 POSTNQ15063 836 aa18.77■□□□□ 0.6
EXOSC3-203ENST00000465229 GRIK4Q16099 956 aa18.77■□□□□ 0.6
EXOSC3-203ENST00000465229 TRIML1Q8N9V2 468 aa18.77■□□□□ 0.6
EXOSC3-203ENST00000465229 VTI1AQ96AJ9 217 aa18.77■□□□□ 0.6
EXOSC3-203ENST00000465229 MRFAP1L1Q96HT8 127 aa18.77■□□□□ 0.6
EXOSC3-203ENST00000465229 GLT1D1Q96MS3 346 aa18.77■□□□□ 0.6
EXOSC3-203ENST00000465229 TRIM5Q9C035 493 aa18.77■□□□□ 0.6
EXOSC3-203ENST00000465229 PDLIM7Q9NR12 457 aa18.77■□□□□ 0.6
EXOSC3-203ENST00000465229 HDAC6Q9UBN7 1215 aa18.77■□□□□ 0.6
EXOSC3-203ENST00000465229 PPME1Q9Y570 386 aa18.77■□□□□ 0.6
EXOSC3-203ENST00000465229 SCN10AQ9Y5Y9 1956 aa18.77■□□□□ 0.59
EXOSC3-203ENST00000465229 NRCAMQ92823 1304 aa18.76■□□□□ 0.59
EXOSC3-203ENST00000465229 NPHP3-ACAD11A0A0J9YXS1 232 aa18.76■□□□□ 0.59
EXOSC3-203ENST00000465229 USO1O60763 962 aaKnown RBP18.76■□□□□ 0.59
EXOSC3-203ENST00000465229 PRR29P0C7W0 189 aa18.76■□□□□ 0.59
EXOSC3-203ENST00000465229 IGBP1P78318 339 aa18.76■□□□□ 0.59
EXOSC3-203ENST00000465229 PNOCQ13519 176 aa18.76■□□□□ 0.59
EXOSC3-203ENST00000465229 CUL4BQ13620 913 aa18.76■□□□□ 0.59
EXOSC3-203ENST00000465229 HIC1Q14526 733 aa18.76■□□□□ 0.59
EXOSC3-203ENST00000465229 MARCH8Q5T0T0 291 aa18.76■□□□□ 0.59
EXOSC3-203ENST00000465229 C7orf31Q8N865 590 aa18.76■□□□□ 0.59
EXOSC3-203ENST00000465229 SPATA20Q8TB22 786 aa18.76■□□□□ 0.59
EXOSC3-203ENST00000465229 DDX12PQ92771 950 aa18.76■□□□□ 0.59
EXOSC3-203ENST00000465229 C7orf25Q9BPX7 421 aa18.76■□□□□ 0.59
EXOSC3-203ENST00000465229 TRIM9Q9C026 710 aa18.76■□□□□ 0.59
EXOSC3-203ENST00000465229 LRRC27Q9C0I9 530 aa18.76■□□□□ 0.59
EXOSC3-203ENST00000465229 BLZF1Q9H2G9 400 aa18.76■□□□□ 0.59
EXOSC3-203ENST00000465229 DHX33Q9H6R0 707 aaKnown RBP18.76■□□□□ 0.59
EXOSC3-203ENST00000465229 KCND2Q9NZV8 630 aa18.76■□□□□ 0.59
EXOSC3-203ENST00000465229 FRMPD3Q5JV73 1810 aa18.76■□□□□ 0.59
EXOSC3-203ENST00000465229 COL1A2P08123 1366 aa18.76■□□□□ 0.59
EXOSC3-203ENST00000465229 RRN3P2A6NIE6 340 aa18.75■□□□□ 0.59
EXOSC3-203ENST00000465229 GTPBP6O43824 516 aaPredicted RBP18.75■□□□□ 0.59
EXOSC3-203ENST00000465229 MAFO75444 373 aaPredicted RBP18.75■□□□□ 0.59
EXOSC3-203ENST00000465229 DGAT1O75907 488 aa18.75■□□□□ 0.59
EXOSC3-203ENST00000465229 HOXC8P31273 242 aa18.75■□□□□ 0.59
EXOSC3-203ENST00000465229 SARSP49591 514 aaKnown RBP18.75■□□□□ 0.59
EXOSC3-203ENST00000465229 RAD51AP2Q09MP3 1159 aa18.75■□□□□ 0.59
EXOSC3-203ENST00000465229 ITGA7Q13683 1181 aa18.75■□□□□ 0.59
EXOSC3-203ENST00000465229 DYMQ7RTS9 669 aa18.75■□□□□ 0.59
EXOSC3-203ENST00000465229 AOPEPQ8N6M6 819 aa18.75■□□□□ 0.59
EXOSC3-203ENST00000465229 LMBR1Q8WVP7 490 aa18.75■□□□□ 0.59
EXOSC3-203ENST00000465229 DNAJC19Q96DA6 116 aa18.75■□□□□ 0.59
EXOSC3-203ENST00000465229 ZBTB10Q96DT7 871 aa18.75■□□□□ 0.59
EXOSC3-203ENST00000465229 POLD4Q9HCU8 107 aa18.75■□□□□ 0.59
EXOSC3-203ENST00000465229 XPNPEP1Q9NQW7 623 aa18.75■□□□□ 0.59
EXOSC3-203ENST00000465229 BMP2KQ9NSY1 1161 aaPredicted RBP18.75■□□□□ 0.59
EXOSC3-203ENST00000465229 PCDHA5Q9Y5H7 936 aa18.75■□□□□ 0.59
EXOSC3-203ENST00000465229 MYL1P05976 194 aa18.74■□□□□ 0.59
EXOSC3-203ENST00000465229 GUCY2CP25092 1073 aa18.74■□□□□ 0.59
EXOSC3-203ENST00000465229 KLRC1P26715 233 aa18.74■□□□□ 0.59
EXOSC3-203ENST00000465229 RFC5P40937 340 aa18.74■□□□□ 0.59
EXOSC3-203ENST00000465229 TPM4P67936 248 aa18.74■□□□□ 0.59
EXOSC3-203ENST00000465229 ADAM17P78536 824 aa18.74■□□□□ 0.59
EXOSC3-203ENST00000465229 TBC1D8BQ0IIM8 1120 aa18.74■□□□□ 0.59
EXOSC3-203ENST00000465229 GIT2Q14161 759 aa18.74■□□□□ 0.59
EXOSC3-203ENST00000465229 COL13A1Q5TAT6 717 aaPredicted RBP18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms