RNA–Protein interactions for RNA: ENST00000465074.1

XRN1-204, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 643 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-204ENST00000465074 PPP2R5CQ13362 524 aa13.69□□□□□ -0.22
XRN1-204ENST00000465074 XKR3Q5GH77 459 aa13.69□□□□□ -0.22
XRN1-204ENST00000465074 PLA2G4FQ68DD2 849 aa13.69□□□□□ -0.22
XRN1-204ENST00000465074 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.69□□□□□ -0.22
XRN1-204ENST00000465074 SLFN12Q8IYM2 578 aa13.69□□□□□ -0.22
XRN1-204ENST00000465074 GDPD5Q8WTR4 605 aa13.69□□□□□ -0.22
XRN1-204ENST00000465074 HAS1Q92839 578 aa13.69□□□□□ -0.22
XRN1-204ENST00000465074 TGS1Q96RS0 853 aaKnown RBP13.69□□□□□ -0.22
XRN1-204ENST00000465074 RGL1Q9NZL6 768 aa13.69□□□□□ -0.22
XRN1-204ENST00000465074 VAV3Q9UKW4 847 aa13.69□□□□□ -0.22
XRN1-204ENST00000465074 LRFN2Q9ULH4 789 aa13.69□□□□□ -0.22
XRN1-204ENST00000465074 PCDHA12Q9UN75 941 aa13.69□□□□□ -0.22
XRN1-204ENST00000465074 DENND3A2RUS2 1198 aa13.68□□□□□ -0.22
XRN1-204ENST00000465074 WNT7AO00755 349 aa13.68□□□□□ -0.22
XRN1-204ENST00000465074 TBX3O15119 743 aa13.68□□□□□ -0.22
XRN1-204ENST00000465074 NEMFO60524 1076 aa13.68□□□□□ -0.22
XRN1-204ENST00000465074 QARSP47897 775 aaKnown RBP13.68□□□□□ -0.22
XRN1-204ENST00000465074 DNM2P50570 870 aa13.68□□□□□ -0.22
XRN1-204ENST00000465074 CRYBB1P53674 252 aaPredicted RBP13.68□□□□□ -0.22
XRN1-204ENST00000465074 MKRN4PQ13434 485 aaPredicted RBP13.68□□□□□ -0.22
XRN1-204ENST00000465074 CTTNQ14247 550 aaKnown RBP13.68□□□□□ -0.22
XRN1-204ENST00000465074 RTN4RL1Q86UN2 441 aaPredicted RBP13.68□□□□□ -0.22
XRN1-204ENST00000465074 TPH2Q8IWU9 490 aa13.68□□□□□ -0.22
XRN1-204ENST00000465074 TMEM40Q8WWA1 233 aa13.68□□□□□ -0.22
XRN1-204ENST00000465074 NLRP7Q8WX94 980 aa13.68□□□□□ -0.22
XRN1-204ENST00000465074 DYDC2Q96IM9 177 aa13.68□□□□□ -0.22
XRN1-204ENST00000465074 C17orf80Q9BSJ5 609 aa13.68□□□□□ -0.22
XRN1-204ENST00000465074 PRDM6Q9NQX0 595 aa13.68□□□□□ -0.22
XRN1-204ENST00000465074 BMP2KQ9NSY1 1161 aaPredicted RBP13.68□□□□□ -0.22
XRN1-204ENST00000465074 ST3GAL5Q9UNP4 418 aa13.68□□□□□ -0.22
XRN1-204ENST00000465074 SQORQ9Y6N5 450 aa13.68□□□□□ -0.22
XRN1-204ENST00000465074 COL4A4P53420 1690 aaPredicted RBP13.68□□□□□ -0.22
XRN1-204ENST00000465074 TRANK1O15050 2925 aa13.67□□□□□ -0.22
XRN1-204ENST00000465074 GPR182O15218 404 aa13.67□□□□□ -0.22
XRN1-204ENST00000465074 DKC1O60832 514 aaKnown RBP eCLIP13.67□□□□□ -0.22
XRN1-204ENST00000465074 P4HBP07237 508 aaKnown RBP13.67□□□□□ -0.22
XRN1-204ENST00000465074 NPEPPSP55786 919 aa13.67□□□□□ -0.22
XRN1-204ENST00000465074 HTRA4P83105 476 aaPredicted RBP13.67□□□□□ -0.22
XRN1-204ENST00000465074 GRB10Q13322 594 aa13.67□□□□□ -0.22
XRN1-204ENST00000465074 EPHA7Q15375 998 aa13.67□□□□□ -0.22
XRN1-204ENST00000465074 ZNF174Q15697 407 aa13.67□□□□□ -0.22
XRN1-204ENST00000465074 PAN2Q504Q3 1202 aaKnown RBP13.67□□□□□ -0.22
XRN1-204ENST00000465074 ODR4Q5SWX8 454 aa13.67□□□□□ -0.22
XRN1-204ENST00000465074 MCTP1Q6DN14 999 aa13.67□□□□□ -0.22
XRN1-204ENST00000465074 B3GNT9Q6UX72 402 aa13.67□□□□□ -0.22
XRN1-204ENST00000465074 FIBCD1Q8N539 461 aa13.67□□□□□ -0.22
XRN1-204ENST00000465074 FBXO22Q8NEZ5 403 aa13.67□□□□□ -0.22
XRN1-204ENST00000465074 ADAM2Q99965 735 aa13.67□□□□□ -0.22
XRN1-204ENST00000465074 FTHL17Q9BXU8 183 aa13.67□□□□□ -0.22
XRN1-204ENST00000465074 NIFKQ9BYG3 293 aaKnown RBP13.67□□□□□ -0.22
XRN1-204ENST00000465074 TTC12Q9H892 705 aaPredicted RBP13.67□□□□□ -0.22
XRN1-204ENST00000465074 NLRC5Q86WI3 1866 aa13.67□□□□□ -0.22
XRN1-204ENST00000465074 KDM3AQ9Y4C1 1321 aa13.66□□□□□ -0.22
XRN1-204ENST00000465074 GPR32O75388 356 aa13.66□□□□□ -0.22
XRN1-204ENST00000465074 CSDE1O75534 798 aaKnown RBP13.66□□□□□ -0.22
XRN1-204ENST00000465074 STBD1O95210 358 aa13.66□□□□□ -0.22
XRN1-204ENST00000465074 CD2BP2O95400 341 aaKnown RBP13.66□□□□□ -0.22
XRN1-204ENST00000465074 FGFR4P22455 802 aa13.66□□□□□ -0.22
XRN1-204ENST00000465074 ERVK-21P61565 698 aa13.66□□□□□ -0.22
XRN1-204ENST00000465074 DRP2Q13474 957 aa13.66□□□□□ -0.22
XRN1-204ENST00000465074 BTG3Q14201 252 aaPredicted RBP13.66□□□□□ -0.22
XRN1-204ENST00000465074 XKR9Q5GH70 373 aa13.66□□□□□ -0.22
XRN1-204ENST00000465074 ANO5Q75V66 913 aa13.66□□□□□ -0.22
XRN1-204ENST00000465074 RHPN2Q8IUC4 686 aa13.66□□□□□ -0.22
XRN1-204ENST00000465074 ZNF579Q8NAF0 562 aaKnown RBP13.66□□□□□ -0.22
XRN1-204ENST00000465074 FBXO18Q8NFZ0 1043 aa13.66□□□□□ -0.22
XRN1-204ENST00000465074 LINC01599Q8WXQ3 324 aa13.66□□□□□ -0.22
XRN1-204ENST00000465074 TMX3Q96JJ7 454 aa13.66□□□□□ -0.22
XRN1-204ENST00000465074 CEP170P1Q96L14 293 aa13.66□□□□□ -0.22
XRN1-204ENST00000465074 CCDC43Q96MW1 224 aaKnown RBP13.66□□□□□ -0.22
XRN1-204ENST00000465074 LXNQ9BS40 222 aa13.66□□□□□ -0.22
XRN1-204ENST00000465074 TMX1Q9H3N1 280 aa13.66□□□□□ -0.22
XRN1-204ENST00000465074 ERVK-5Q9HDB9 667 aa13.66□□□□□ -0.22
XRN1-204ENST00000465074 CYP26B1Q9NR63 512 aa13.66□□□□□ -0.22
XRN1-204ENST00000465074 SUCLA2Q9P2R7 463 aaPredicted RBP13.66□□□□□ -0.22
XRN1-204ENST00000465074 WRAP73Q9P2S5 460 aaPredicted RBP13.66□□□□□ -0.22
XRN1-204ENST00000465074 MTCH2Q9Y6C9 303 aa13.66□□□□□ -0.22
XRN1-204ENST00000465074 A0A087WWV3 80 aa13.65□□□□□ -0.22
XRN1-204ENST00000465074 ZBTB39O15060 712 aa13.65□□□□□ -0.22
XRN1-204ENST00000465074 MGEA5O60502 916 aa13.65□□□□□ -0.22
XRN1-204ENST00000465074 CSPG5O95196 566 aa13.65□□□□□ -0.22
XRN1-204ENST00000465074 STAG3L1P0CL83 205 aa13.65□□□□□ -0.22
XRN1-204ENST00000465074 GATMP50440 423 aa13.65□□□□□ -0.22
XRN1-204ENST00000465074 POLGP54098 1239 aaPredicted RBP13.65□□□□□ -0.22
XRN1-204ENST00000465074 TARBP2Q15633 366 aaKnown RBP13.65□□□□□ -0.22
XRN1-204ENST00000465074 EPC2Q52LR7 807 aa13.65□□□□□ -0.22
XRN1-204ENST00000465074 OTUD6AQ7L8S5 288 aa13.65□□□□□ -0.22
XRN1-204ENST00000465074 FAM228AQ86W67 206 aa13.65□□□□□ -0.22
XRN1-204ENST00000465074 KSR1Q8IVT5 923 aa13.65□□□□□ -0.22
XRN1-204ENST00000465074 RNF169Q8NCN4 708 aa13.65□□□□□ -0.22
XRN1-204ENST00000465074 TBC1D32Q96NH3 1257 aa13.65□□□□□ -0.22
XRN1-204ENST00000465074 EIF2AK1Q9BQI3 630 aaKnown RBP13.65□□□□□ -0.22
XRN1-204ENST00000465074 TSPYL2Q9H2G4 693 aaPredicted RBP13.65□□□□□ -0.22
XRN1-204ENST00000465074 TMEM60Q9H2L4 133 aa13.65□□□□□ -0.22
XRN1-204ENST00000465074 FOXP1Q9H334 677 aaPredicted RBP13.65□□□□□ -0.22
XRN1-204ENST00000465074 NOL7Q9UMY1 257 aaKnown RBP13.65□□□□□ -0.22
XRN1-204ENST00000465074 KIF3AQ9Y496 699 aa13.65□□□□□ -0.22
XRN1-204ENST00000465074 PCDHB7Q9Y5E2 793 aa13.65□□□□□ -0.22
XRN1-204ENST00000465074 PRUNE2Q8WUY3 3088 aa13.65□□□□□ -0.22
XRN1-204ENST00000465074 DLL1O00548 723 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms