RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 TXLNGYQ9BZA5 131 aa13.68□□□□□ -0.22
CLCNKA-204ENST00000464764 LRRC27Q9C0I9 530 aa13.68□□□□□ -0.22
CLCNKA-204ENST00000464764 SLITRK6Q9H5Y7 841 aa13.68□□□□□ -0.22
CLCNKA-204ENST00000464764 SLC24A3Q9HC58 644 aa13.68□□□□□ -0.22
CLCNKA-204ENST00000464764 TAS2R14Q9NYV8 317 aa13.68□□□□□ -0.22
CLCNKA-204ENST00000464764 DBR1Q9UK59 544 aaKnown RBP13.68□□□□□ -0.22
CLCNKA-204ENST00000464764 SNED1Q8TER0 1413 aa13.68□□□□□ -0.22
CLCNKA-204ENST00000464764 GBP2P32456 591 aaPredicted RBP13.67□□□□□ -0.22
CLCNKA-204ENST00000464764 LRRC14Q15048 493 aa13.67□□□□□ -0.22
CLCNKA-204ENST00000464764 IFI16Q16666 785 aaKnown RBP13.67□□□□□ -0.22
CLCNKA-204ENST00000464764 RPAINQ86UA6 219 aa13.67□□□□□ -0.22
CLCNKA-204ENST00000464764 PALB2Q86YC2 1186 aa13.67□□□□□ -0.22
CLCNKA-204ENST00000464764 EPS8L3Q8TE67 593 aaKnown RBP13.67□□□□□ -0.22
CLCNKA-204ENST00000464764 SEC14L1Q92503 715 aa13.67□□□□□ -0.22
CLCNKA-204ENST00000464764 ARHGEF26Q96DR7 871 aa13.67□□□□□ -0.22
CLCNKA-204ENST00000464764 ZDHHC18Q9NUE0 388 aa13.67□□□□□ -0.22
CLCNKA-204ENST00000464764 AMFRQ9UKV5 643 aa13.67□□□□□ -0.22
CLCNKA-204ENST00000464764 DNAJC8O75937 253 aaPredicted RBP13.67□□□□□ -0.22
CLCNKA-204ENST00000464764 GCFC2P16383 781 aaKnown RBP13.67□□□□□ -0.22
CLCNKA-204ENST00000464764 POLD1P28340 1107 aa13.67□□□□□ -0.22
CLCNKA-204ENST00000464764 KCNJ2P63252 427 aa13.67□□□□□ -0.22
CLCNKA-204ENST00000464764 DR1Q01658 176 aa13.67□□□□□ -0.22
CLCNKA-204ENST00000464764 EPHA7Q15375 998 aa13.67□□□□□ -0.22
CLCNKA-204ENST00000464764 C16orf86Q6ZW13 317 aa13.67□□□□□ -0.22
CLCNKA-204ENST00000464764 SFR1Q86XK3 245 aa13.67□□□□□ -0.22
CLCNKA-204ENST00000464764 TEX11Q8IYF3 940 aa13.67□□□□□ -0.22
CLCNKA-204ENST00000464764 CCDC63Q8NA47 563 aa13.67□□□□□ -0.22
CLCNKA-204ENST00000464764 MGARPQ8TDB4 240 aa13.67□□□□□ -0.22
CLCNKA-204ENST00000464764 C18orf8Q96DM3 657 aa13.67□□□□□ -0.22
CLCNKA-204ENST00000464764 MLXIPLQ9NP71 852 aa13.67□□□□□ -0.22
CLCNKA-204ENST00000464764 FAM114A2Q9NRY5 505 aa13.67□□□□□ -0.22
CLCNKA-204ENST00000464764 GCNT4Q9P109 453 aa13.67□□□□□ -0.22
CLCNKA-204ENST00000464764 ESYT2A0FGR8 921 aa13.67□□□□□ -0.22
CLCNKA-204ENST00000464764 XRCC5P13010 732 aaKnown RBP13.67□□□□□ -0.22
CLCNKA-204ENST00000464764 PMS2P54278 862 aa13.67□□□□□ -0.22
CLCNKA-204ENST00000464764 NFIXQ14938 502 aa13.67□□□□□ -0.22
CLCNKA-204ENST00000464764 C10orf76Q5T2E6 689 aa13.67□□□□□ -0.22
CLCNKA-204ENST00000464764 ALG3Q92685 438 aa13.67□□□□□ -0.22
CLCNKA-204ENST00000464764 PRCCQ92733 491 aaPredicted RBP13.67□□□□□ -0.22
CLCNKA-204ENST00000464764 CUL5Q93034 780 aa13.67□□□□□ -0.22
CLCNKA-204ENST00000464764 ERP44Q9BS26 406 aa13.67□□□□□ -0.22
CLCNKA-204ENST00000464764 JMJD4Q9H9V9 463 aa13.67□□□□□ -0.22
CLCNKA-204ENST00000464764 SEPT11Q9NVA2 429 aaKnown RBP13.67□□□□□ -0.22
CLCNKA-204ENST00000464764 DAAM1Q9Y4D1 1078 aa13.67□□□□□ -0.22
CLCNKA-204ENST00000464764 ROBO3Q96MS0 1386 aa13.66□□□□□ -0.22
CLCNKA-204ENST00000464764 DDX3YO15523 660 aaKnown RBP13.66□□□□□ -0.22
CLCNKA-204ENST00000464764 KIF1CO43896 1103 aaKnown RBP13.66□□□□□ -0.22
CLCNKA-204ENST00000464764 NEBLO76041 1014 aa13.66□□□□□ -0.22
CLCNKA-204ENST00000464764 FGFR4P22455 802 aa13.66□□□□□ -0.22
CLCNKA-204ENST00000464764 KLRC3Q07444 240 aa13.66□□□□□ -0.22
CLCNKA-204ENST00000464764 DUPD1Q68J44 220 aa13.66□□□□□ -0.22
CLCNKA-204ENST00000464764 ZDHHC24Q6UX98 284 aa13.66□□□□□ -0.22
CLCNKA-204ENST00000464764 SLC30A10Q6XR72 485 aa13.66□□□□□ -0.22
CLCNKA-204ENST00000464764 KSR1Q8IVT5 923 aa13.66□□□□□ -0.22
CLCNKA-204ENST00000464764 ADGRF4Q8IZF3 695 aa13.66□□□□□ -0.22
CLCNKA-204ENST00000464764 RTFDC1Q9BY42 306 aaPredicted RBP13.66□□□□□ -0.22
CLCNKA-204ENST00000464764 CCDC88AQ3V6T2 1871 aa13.66□□□□□ -0.22
CLCNKA-204ENST00000464764 SCN7AQ01118 1682 aa13.66□□□□□ -0.22
CLCNKA-204ENST00000464764 LAMB1P07942 1786 aa13.66□□□□□ -0.22
CLCNKA-204ENST00000464764 A8MUI8 341 aa13.66□□□□□ -0.22
CLCNKA-204ENST00000464764 RAD21O60216 631 aa13.66□□□□□ -0.22
CLCNKA-204ENST00000464764 EVI5O60447 810 aa13.66□□□□□ -0.22
CLCNKA-204ENST00000464764 KRT13P13646 458 aa13.66□□□□□ -0.22
CLCNKA-204ENST00000464764 CREB1P16220 341 aa13.66□□□□□ -0.22
CLCNKA-204ENST00000464764 MRPL12P52815 198 aaKnown RBP13.66□□□□□ -0.22
CLCNKA-204ENST00000464764 KCTD1Q719H9 257 aa13.66□□□□□ -0.22
CLCNKA-204ENST00000464764 OTUD6AQ7L8S5 288 aa13.66□□□□□ -0.22
CLCNKA-204ENST00000464764 KIF2BQ8N4N8 673 aa13.66□□□□□ -0.22
CLCNKA-204ENST00000464764 OLIG1Q8TAK6 271 aa13.66□□□□□ -0.22
CLCNKA-204ENST00000464764 NSMCE1Q8WV22 266 aa13.66□□□□□ -0.22
CLCNKA-204ENST00000464764 FAXDC2Q96IV6 333 aa13.66□□□□□ -0.22
CLCNKA-204ENST00000464764 INTS9Q9NV88 658 aaKnown RBP13.66□□□□□ -0.22
CLCNKA-204ENST00000464764 SWAP70Q9UH65 585 aa13.66□□□□□ -0.22
CLCNKA-204ENST00000464764 NENFQ9UMX5 172 aa13.66□□□□□ -0.22
CLCNKA-204ENST00000464764 RGS16O15492 202 aaPredicted RBP13.65□□□□□ -0.22
CLCNKA-204ENST00000464764 MMP13P45452 471 aa13.65□□□□□ -0.22
CLCNKA-204ENST00000464764 MARCKSL1P49006 195 aa13.65□□□□□ -0.22
CLCNKA-204ENST00000464764 SLC12A3P55017 1021 aa13.65□□□□□ -0.22
CLCNKA-204ENST00000464764 PIGWQ7Z7B1 504 aa13.65□□□□□ -0.22
CLCNKA-204ENST00000464764 CCDC50Q8IVM0 306 aa13.65□□□□□ -0.22
CLCNKA-204ENST00000464764 ZDHHC14Q8IZN3 488 aa13.65□□□□□ -0.22
CLCNKA-204ENST00000464764 LMBR1Q8WVP7 490 aa13.65□□□□□ -0.22
CLCNKA-204ENST00000464764 PABPC3Q9H361 631 aaKnown RBP13.65□□□□□ -0.22
CLCNKA-204ENST00000464764 BZW2Q9Y6E2 419 aaKnown RBP13.65□□□□□ -0.22
CLCNKA-204ENST00000464764 CCDC189A1A4V9 331 aa13.65□□□□□ -0.22
CLCNKA-204ENST00000464764 USP17L10C9JJH3 530 aa13.65□□□□□ -0.22
CLCNKA-204ENST00000464764 PRKCIP41743 596 aa13.65□□□□□ -0.22
CLCNKA-204ENST00000464764 PICALMQ13492 652 aa13.65□□□□□ -0.22
CLCNKA-204ENST00000464764 GIT2Q14161 759 aa13.65□□□□□ -0.22
CLCNKA-204ENST00000464764 KNOP1Q1ED39 458 aaKnown RBP13.65□□□□□ -0.22
CLCNKA-204ENST00000464764 DENND2CQ68D51 928 aa13.65□□□□□ -0.22
CLCNKA-204ENST00000464764 NBPF5PQ86XG9 351 aaPredicted RBP13.65□□□□□ -0.22
CLCNKA-204ENST00000464764 JAMLQ86YT9 394 aa13.65□□□□□ -0.22
CLCNKA-204ENST00000464764 SLC35C1Q96A29 364 aa13.65□□□□□ -0.22
CLCNKA-204ENST00000464764 REEP2Q9BRK0 252 aa13.65□□□□□ -0.22
CLCNKA-204ENST00000464764 ANKRD2Q9GZV1 360 aa13.65□□□□□ -0.22
CLCNKA-204ENST00000464764 DHX36Q9H2U1 1008 aaKnown RBP13.65□□□□□ -0.22
CLCNKA-204ENST00000464764 CNOT10Q9H9A5 744 aaKnown RBP13.65□□□□□ -0.22
CLCNKA-204ENST00000464764 COG5Q9UP83 839 aa13.65□□□□□ -0.22
CLCNKA-204ENST00000464764 EIF4E1BA6NMX2 242 aaKnown RBP13.65□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms