RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 DLG4P78352 724 aa4.89□□□□□ -1.63
HMGXB4-205ENST00000464480 FOXO4P98177 505 aa4.89□□□□□ -1.63
HMGXB4-205ENST00000464480 MAP3K12Q12852 859 aa4.89□□□□□ -1.63
HMGXB4-205ENST00000464480 ADAM9Q13443 819 aa4.89□□□□□ -1.63
HMGXB4-205ENST00000464480 MOGSQ13724 837 aa4.89□□□□□ -1.63
HMGXB4-205ENST00000464480 CLUL1Q15846 466 aa4.89□□□□□ -1.63
HMGXB4-205ENST00000464480 NFE2Q16621 373 aaPredicted RBP4.89□□□□□ -1.63
HMGXB4-205ENST00000464480 CT83Q5H943 113 aa4.89□□□□□ -1.63
HMGXB4-205ENST00000464480 LRSAM1Q6UWE0 723 aa4.89□□□□□ -1.63
HMGXB4-205ENST00000464480 KANSL1Q7Z3B3 1105 aa4.89□□□□□ -1.63
HMGXB4-205ENST00000464480 FMNL3Q8IVF7 1028 aa4.89□□□□□ -1.63
HMGXB4-205ENST00000464480 KYQ8NBH2 561 aa4.89□□□□□ -1.63
HMGXB4-205ENST00000464480 TGFBRAP1Q8WUH2 860 aa4.89□□□□□ -1.63
HMGXB4-205ENST00000464480 RAX2Q96IS3 184 aa4.89□□□□□ -1.63
HMGXB4-205ENST00000464480 FAXDC2Q96IV6 333 aa4.89□□□□□ -1.63
HMGXB4-205ENST00000464480 CAMKK2Q96RR4 588 aa4.89□□□□□ -1.63
HMGXB4-205ENST00000464480 C11orf84Q9BUA3 381 aaPredicted RBP4.89□□□□□ -1.63
HMGXB4-205ENST00000464480 ANO3Q9BYT9 981 aa4.89□□□□□ -1.63
HMGXB4-205ENST00000464480 CDH19Q9H159 772 aa4.89□□□□□ -1.63
HMGXB4-205ENST00000464480 GCM1Q9NP62 436 aa4.89□□□□□ -1.63
HMGXB4-205ENST00000464480 ZIM2Q9NZV7 527 aa4.89□□□□□ -1.63
HMGXB4-205ENST00000464480 INVSQ9Y283 1065 aa4.89□□□□□ -1.63
HMGXB4-205ENST00000464480 LUC7L2Q9Y383 392 aaKnown RBP4.89□□□□□ -1.63
HMGXB4-205ENST00000464480 IRAK3Q9Y616 596 aa4.89□□□□□ -1.63
HMGXB4-205ENST00000464480 PRSS38A1L453 326 aa4.88□□□□□ -1.63
HMGXB4-205ENST00000464480 FZD9O00144 591 aa4.88□□□□□ -1.63
HMGXB4-205ENST00000464480 CHGBP05060 677 aa4.88□□□□□ -1.63
HMGXB4-205ENST00000464480 GLDCP23378 1020 aa4.88□□□□□ -1.63
HMGXB4-205ENST00000464480 RECQLP46063 649 aaPredicted RBP4.88□□□□□ -1.63
HMGXB4-205ENST00000464480 LIMS1P48059 325 aa4.88□□□□□ -1.63
HMGXB4-205ENST00000464480 GLRBP48167 497 aa4.88□□□□□ -1.63
HMGXB4-205ENST00000464480 IL13RA1P78552 427 aa4.88□□□□□ -1.63
HMGXB4-205ENST00000464480 MRPS9P82933 396 aaKnown RBP4.88□□□□□ -1.63
HMGXB4-205ENST00000464480 SPIDRQ14159 915 aa4.88□□□□□ -1.63
HMGXB4-205ENST00000464480 ACAP2Q15057 778 aa4.88□□□□□ -1.63
HMGXB4-205ENST00000464480 PCBP2Q15366 365 aaKnown RBP eCLIP4.88□□□□□ -1.63
HMGXB4-205ENST00000464480 PKN1Q16512 942 aa4.88□□□□□ -1.63
HMGXB4-205ENST00000464480 TMEM240Q5SV17 173 aa4.88□□□□□ -1.63
HMGXB4-205ENST00000464480 CXXC5Q7LFL8 322 aaKnown RBP4.88□□□□□ -1.63
HMGXB4-205ENST00000464480 RAVER1Q8IY67 606 aaKnown RBP4.88□□□□□ -1.63
HMGXB4-205ENST00000464480 POU5F2Q8N7G0 328 aa4.88□□□□□ -1.63
HMGXB4-205ENST00000464480 LINC00482Q8N8I6 264 aa4.88□□□□□ -1.63
HMGXB4-205ENST00000464480 RSAD2Q8WXG1 361 aa4.88□□□□□ -1.63
HMGXB4-205ENST00000464480 AUTS2Q8WXX7 1259 aa4.88□□□□□ -1.63
HMGXB4-205ENST00000464480 KCNN1Q92952 543 aa4.88□□□□□ -1.63
HMGXB4-205ENST00000464480 ZBTB8AQ96BR9 441 aa4.88□□□□□ -1.63
HMGXB4-205ENST00000464480 CCDC136Q96JN2 1154 aa4.88□□□□□ -1.63
HMGXB4-205ENST00000464480 HIST1H2AHQ96KK5 128 aa4.88□□□□□ -1.63
HMGXB4-205ENST00000464480 SIGLEC10Q96LC7 697 aa4.88□□□□□ -1.63
HMGXB4-205ENST00000464480 PPP1R16BQ96T49 567 aa4.88□□□□□ -1.63
HMGXB4-205ENST00000464480 HIST1H2AJQ99878 128 aa4.88□□□□□ -1.63
HMGXB4-205ENST00000464480 TACO1Q9BSH4 297 aaKnown RBP4.88□□□□□ -1.63
HMGXB4-205ENST00000464480 QRSL1Q9H0R6 528 aaKnown RBP4.88□□□□□ -1.63
HMGXB4-205ENST00000464480 KCTD10Q9H3F6 313 aa4.88□□□□□ -1.63
HMGXB4-205ENST00000464480 MTG2Q9H4K7 406 aa4.88□□□□□ -1.63
HMGXB4-205ENST00000464480 KCNK12Q9HB15 430 aa4.88□□□□□ -1.63
HMGXB4-205ENST00000464480 KCND1Q9NSA2 647 aa4.88□□□□□ -1.63
HMGXB4-205ENST00000464480 KCMF1Q9P0J7 381 aa4.88□□□□□ -1.63
HMGXB4-205ENST00000464480 ZNF180Q9UJW8 692 aa4.88□□□□□ -1.63
HMGXB4-205ENST00000464480 FBXO10Q9UK96 956 aa4.88□□□□□ -1.63
HMGXB4-205ENST00000464480 CROTQ9UKG9 612 aa4.88□□□□□ -1.63
HMGXB4-205ENST00000464480 DENND2AQ9ULE3 1009 aa4.88□□□□□ -1.63
HMGXB4-205ENST00000464480 EDARQ9UNE0 448 aa4.88□□□□□ -1.63
HMGXB4-205ENST00000464480 WASF3Q9UPY6 502 aa4.88□□□□□ -1.63
HMGXB4-205ENST00000464480 NUMBLQ9Y6R0 609 aa4.88□□□□□ -1.63
HMGXB4-205ENST00000464480 PMF1-BGLAPU3KQ54 211 aa4.88□□□□□ -1.63
HMGXB4-205ENST00000464480 KLHL33A6NCF5 533 aa4.87□□□□□ -1.63
HMGXB4-205ENST00000464480 TSPAN6O43657 245 aa4.87□□□□□ -1.63
HMGXB4-205ENST00000464480 FARP2O94887 1054 aaPredicted RBP4.87□□□□□ -1.63
HMGXB4-205ENST00000464480 ABLIM3O94929 683 aa4.87□□□□□ -1.63
HMGXB4-205ENST00000464480 SCGB1D2O95969 90 aa4.87□□□□□ -1.63
HMGXB4-205ENST00000464480 IL18BPO95998 194 aa4.87□□□□□ -1.63
HMGXB4-205ENST00000464480 LPLP06858 475 aa4.87□□□□□ -1.63
HMGXB4-205ENST00000464480 PFKMP08237 780 aa4.87□□□□□ -1.63
HMGXB4-205ENST00000464480 GPR15P49685 360 aa4.87□□□□□ -1.63
HMGXB4-205ENST00000464480 SLC5A3P53794 718 aa4.87□□□□□ -1.63
HMGXB4-205ENST00000464480 SRSF2Q01130 221 aaKnown RBP4.87□□□□□ -1.63
HMGXB4-205ENST00000464480 NOLC1Q14978 699 aaKnown RBP eCLIP4.87□□□□□ -1.63
HMGXB4-205ENST00000464480 STILQ15468 1287 aa4.87□□□□□ -1.63
HMGXB4-205ENST00000464480 WDR72Q3MJ13 1102 aa4.87□□□□□ -1.63
HMGXB4-205ENST00000464480 PITRM1Q5JRX3 1037 aa4.87□□□□□ -1.63
HMGXB4-205ENST00000464480 TOR2AQ5JU69 321 aa4.87□□□□□ -1.63
HMGXB4-205ENST00000464480 CCDC181Q5TID7 509 aa4.87□□□□□ -1.63
HMGXB4-205ENST00000464480 EFCAB2Q5VUJ9 269 aa4.87□□□□□ -1.63
HMGXB4-205ENST00000464480 GRAMD4Q6IC98 578 aa4.87□□□□□ -1.63
HMGXB4-205ENST00000464480 OGFOD2Q6N063 350 aa4.87□□□□□ -1.63
HMGXB4-205ENST00000464480 UNQ6494/PRO21346Q6UXR6 183 aa4.87□□□□□ -1.63
HMGXB4-205ENST00000464480 STK32CQ86UX6 486 aa4.87□□□□□ -1.63
HMGXB4-205ENST00000464480 CHPFQ8IZ52 775 aa4.87□□□□□ -1.63
HMGXB4-205ENST00000464480 STPG3Q8N7X2 389 aa4.87□□□□□ -1.63
HMGXB4-205ENST00000464480 CDYL2Q8N8U2 506 aa4.87□□□□□ -1.63
HMGXB4-205ENST00000464480 OR5AN1Q8NGI8 311 aa4.87□□□□□ -1.63
HMGXB4-205ENST00000464480 EAF2Q96CJ1 260 aaPredicted RBP4.87□□□□□ -1.63
HMGXB4-205ENST00000464480 NOX5Q96PH1 765 aa4.87□□□□□ -1.63
HMGXB4-205ENST00000464480 SLC38A3Q99624 504 aa4.87□□□□□ -1.63
HMGXB4-205ENST00000464480 PITHD1Q9GZP4 211 aaPredicted RBP4.87□□□□□ -1.63
HMGXB4-205ENST00000464480 PCDHB6Q9Y5E3 794 aa4.87□□□□□ -1.63
HMGXB4-205ENST00000464480 GPR45Q9Y5Y3 372 aa4.87□□□□□ -1.63
HMGXB4-205ENST00000464480 MYPNQ86TC9 1320 aa4.87□□□□□ -1.63
HMGXB4-205ENST00000464480 H0Y858 1186 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms