RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 CD52P31358 61 aa19.06■□□□□ 0.64
VPS52-215ENST00000464425 RILPL1Q5EBL4 403 aa19.06■□□□□ 0.64
VPS52-215ENST00000464425 TSHZ1Q6ZSZ6 1077 aa19.06■□□□□ 0.64
VPS52-215ENST00000464425 FERMT3Q86UX7 667 aa19.06■□□□□ 0.64
VPS52-215ENST00000464425 HERC6Q8IVU3 1022 aa19.06■□□□□ 0.64
VPS52-215ENST00000464425 LINC01465Q8N7H1 131 aa19.06■□□□□ 0.64
VPS52-215ENST00000464425 ZNF668Q96K58 619 aaPredicted RBP19.06■□□□□ 0.64
VPS52-215ENST00000464425 CEP170P1Q96L14 293 aa19.06■□□□□ 0.64
VPS52-215ENST00000464425 MAP7D2Q96T17 732 aa19.06■□□□□ 0.64
VPS52-215ENST00000464425 SEMA6BQ9H3T3 888 aa19.06■□□□□ 0.64
VPS52-215ENST00000464425 CYP26B1Q9NR63 512 aa19.06■□□□□ 0.64
VPS52-215ENST00000464425 MKRN4PQ13434 485 aaPredicted RBP19.05■□□□□ 0.64
VPS52-215ENST00000464425 DRP2Q13474 957 aa19.05■□□□□ 0.64
VPS52-215ENST00000464425 RAB30Q15771 203 aa19.05■□□□□ 0.64
VPS52-215ENST00000464425 TMEM266Q2M3C6 531 aa19.05■□□□□ 0.64
VPS52-215ENST00000464425 FAM117BQ6P1L5 589 aa19.05■□□□□ 0.64
VPS52-215ENST00000464425 OTUD6AQ7L8S5 288 aa19.05■□□□□ 0.64
VPS52-215ENST00000464425 APBB2Q92870 758 aa19.05■□□□□ 0.64
VPS52-215ENST00000464425 NKX2-4Q9H2Z4 354 aa19.05■□□□□ 0.64
VPS52-215ENST00000464425 TTYH1Q9H313 450 aaPredicted RBP19.05■□□□□ 0.64
VPS52-215ENST00000464425 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.05■□□□□ 0.64
VPS52-215ENST00000464425 KDM3AQ9Y4C1 1321 aa19.04■□□□□ 0.64
VPS52-215ENST00000464425 GPR32O75388 356 aa19.04■□□□□ 0.64
VPS52-215ENST00000464425 MAFO75444 373 aaPredicted RBP19.04■□□□□ 0.64
VPS52-215ENST00000464425 ZSCAN22P10073 491 aaPredicted RBP19.04■□□□□ 0.64
VPS52-215ENST00000464425 DDIT3P35638 169 aa19.04■□□□□ 0.64
VPS52-215ENST00000464425 NLRP11P59045 1033 aaKnown RBP19.04■□□□□ 0.64
VPS52-215ENST00000464425 XKR9Q5GH70 373 aa19.04■□□□□ 0.64
VPS52-215ENST00000464425 MYOCDQ8IZQ8 938 aa19.04■□□□□ 0.64
VPS52-215ENST00000464425 USP38Q8NB14 1042 aa19.04■□□□□ 0.64
VPS52-215ENST00000464425 NEK9Q8TD19 979 aa19.04■□□□□ 0.64
VPS52-215ENST00000464425 TMEM40Q8WWA1 233 aa19.04■□□□□ 0.64
VPS52-215ENST00000464425 OSMRQ99650 979 aa19.04■□□□□ 0.64
VPS52-215ENST00000464425 ZBED2Q9BTP6 218 aa19.04■□□□□ 0.64
VPS52-215ENST00000464425 BMP2KQ9NSY1 1161 aaPredicted RBP19.04■□□□□ 0.64
VPS52-215ENST00000464425 PADI3Q9ULW8 664 aa19.04■□□□□ 0.64
VPS52-215ENST00000464425 PCDHA11Q9Y5I1 949 aa19.04■□□□□ 0.64
VPS52-215ENST00000464425 SQORQ9Y6N5 450 aa19.04■□□□□ 0.64
VPS52-215ENST00000464425 IGKV6-21A0A0C4DH24 114 aa19.03■□□□□ 0.64
VPS52-215ENST00000464425 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.03■□□□□ 0.64
VPS52-215ENST00000464425 MED24O75448 989 aa19.03■□□□□ 0.64
VPS52-215ENST00000464425 AMHP03971 560 aa19.03■□□□□ 0.64
VPS52-215ENST00000464425 SPATA31C1P0DKV0 1188 aa19.03■□□□□ 0.64
VPS52-215ENST00000464425 DNM2P50570 870 aa19.03■□□□□ 0.64
VPS52-215ENST00000464425 CRYBB1P53674 252 aaPredicted RBP19.03■□□□□ 0.64
VPS52-215ENST00000464425 NFX1Q12986 1120 aaKnown RBP19.03■□□□□ 0.64
VPS52-215ENST00000464425 RESTQ13127 1097 aa19.03■□□□□ 0.64
VPS52-215ENST00000464425 PAK2Q13177 524 aa19.03■□□□□ 0.64
VPS52-215ENST00000464425 IL17AQ16552 155 aa19.03■□□□□ 0.64
VPS52-215ENST00000464425 CATSPER3Q86XQ3 398 aa19.03■□□□□ 0.64
VPS52-215ENST00000464425 ERMNQ8TAM6 284 aa19.03■□□□□ 0.64
VPS52-215ENST00000464425 PIGOQ8TEQ8 1089 aa19.03■□□□□ 0.64
VPS52-215ENST00000464425 ZNF576Q9H609 170 aa19.03■□□□□ 0.64
VPS52-215ENST00000464425 MTMR10Q9NXD2 777 aa19.03■□□□□ 0.64
VPS52-215ENST00000464425 SUCLA2Q9P2R7 463 aaPredicted RBP19.03■□□□□ 0.64
VPS52-215ENST00000464425 NOC2LQ9Y3T9 749 aaKnown RBP19.03■□□□□ 0.64
VPS52-215ENST00000464425 ENPP3O14638 875 aa19.02■□□□□ 0.64
VPS52-215ENST00000464425 TLL1O43897 1013 aa19.02■□□□□ 0.64
VPS52-215ENST00000464425 RPS6KA5O75582 802 aa19.02■□□□□ 0.64
VPS52-215ENST00000464425 UPP2O95045 317 aa19.02■□□□□ 0.64
VPS52-215ENST00000464425 LYPLA2O95372 231 aa19.02■□□□□ 0.64
VPS52-215ENST00000464425 FXR2P51116 673 aaKnown RBP eCLIP19.02■□□□□ 0.64
VPS52-215ENST00000464425 POLGP54098 1239 aaPredicted RBP19.02■□□□□ 0.64
VPS52-215ENST00000464425 SLC7A3Q8WY07 619 aa19.02■□□□□ 0.64
VPS52-215ENST00000464425 SCLT1Q96NL6 688 aa19.02■□□□□ 0.64
VPS52-215ENST00000464425 IPO9Q96P70 1041 aaKnown RBP19.02■□□□□ 0.64
VPS52-215ENST00000464425 ADAMTS10Q9H324 1103 aa19.02■□□□□ 0.64
VPS52-215ENST00000464425 LRWD1Q9UFC0 647 aa19.02■□□□□ 0.64
VPS52-215ENST00000464425 MYH15Q9Y2K3 1946 aa19.02■□□□□ 0.63
VPS52-215ENST00000464425 LAD1O00515 517 aa19.01■□□□□ 0.63
VPS52-215ENST00000464425 GJB5O95377 273 aa19.01■□□□□ 0.63
VPS52-215ENST00000464425 SLC34A2O95436 690 aa19.01■□□□□ 0.63
VPS52-215ENST00000464425 BRD1O95696 1058 aa19.01■□□□□ 0.63
VPS52-215ENST00000464425 CA3P07451 260 aa19.01■□□□□ 0.63
VPS52-215ENST00000464425 GPC3P51654 580 aa19.01■□□□□ 0.63
VPS52-215ENST00000464425 PKP1Q13835 747 aa19.01■□□□□ 0.63
VPS52-215ENST00000464425 DTHD1Q6ZMT9 781 aa19.01■□□□□ 0.63
VPS52-215ENST00000464425 RHPN2Q8IUC4 686 aa19.01■□□□□ 0.63
VPS52-215ENST00000464425 NLRP7Q8WX94 980 aa19.01■□□□□ 0.63
VPS52-215ENST00000464425 TMEM143Q96AN5 459 aa19.01■□□□□ 0.63
VPS52-215ENST00000464425 JPH2Q9BR39 696 aaPredicted RBP19.01■□□□□ 0.63
VPS52-215ENST00000464425 POLR3CQ9BUI4 534 aaPredicted RBP19.01■□□□□ 0.63
VPS52-215ENST00000464425 TMX1Q9H3N1 280 aa19.01■□□□□ 0.63
VPS52-215ENST00000464425 SLC28A3Q9HAS3 691 aa19.01■□□□□ 0.63
VPS52-215ENST00000464425 TUFT1Q9NNX1 390 aa19.01■□□□□ 0.63
VPS52-215ENST00000464425 ST3GAL5Q9UNP4 418 aa19.01■□□□□ 0.63
VPS52-215ENST00000464425 SIP14410 1827 aa19.01■□□□□ 0.63
VPS52-215ENST00000464425 TMEM265A0A087WTH1 108 aa19■□□□□ 0.63
VPS52-215ENST00000464425 F13A1P00488 732 aa19■□□□□ 0.63
VPS52-215ENST00000464425 CCT6AP40227 531 aaKnown RBP19■□□□□ 0.63
VPS52-215ENST00000464425 RFC5P40937 340 aa19■□□□□ 0.63
VPS52-215ENST00000464425 NUCB2P80303 420 aa19■□□□□ 0.63
VPS52-215ENST00000464425 ATP2C1P98194 919 aaPredicted RBP19■□□□□ 0.63
VPS52-215ENST00000464425 PDIA5Q14554 519 aa19■□□□□ 0.63
VPS52-215ENST00000464425 GRIN2CQ14957 1233 aa19■□□□□ 0.63
VPS52-215ENST00000464425 EMC2Q15006 297 aa19■□□□□ 0.63
VPS52-215ENST00000464425 PPP2R2DQ66LE6 453 aa19■□□□□ 0.63
VPS52-215ENST00000464425 POTEGQ6S5H5 508 aa19■□□□□ 0.63
VPS52-215ENST00000464425 RTN4RL1Q86UN2 441 aaPredicted RBP19■□□□□ 0.63
VPS52-215ENST00000464425 KSR1Q8IVT5 923 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms