RNA–Protein interactions for RNA: ENST00000464082.1

CD46-211, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-211ENST00000464082 ANKRD2Q9GZV1 360 aa6.69□□□□□ -1.34
CD46-211ENST00000464082 COA1Q9GZY4 146 aa6.69□□□□□ -1.34
CD46-211ENST00000464082 CD209Q9NNX6 404 aa6.69□□□□□ -1.34
CD46-211ENST00000464082 SMC4Q9NTJ3 1288 aa6.69□□□□□ -1.34
CD46-211ENST00000464082 RNF19AQ9NV58 838 aa6.69□□□□□ -1.34
CD46-211ENST00000464082 SRRDQ9UH36 339 aa6.69□□□□□ -1.34
CD46-211ENST00000464082 AOX1Q06278 1338 aa6.69□□□□□ -1.34
CD46-211ENST00000464082 SSC5DA1L4H1 1573 aa6.69□□□□□ -1.34
CD46-211ENST00000464082 FOCADQ5VW36 1801 aa6.69□□□□□ -1.34
CD46-211ENST00000464082 H7C1D1 291 aa6.68□□□□□ -1.34
CD46-211ENST00000464082 BCAR3O75815 825 aa6.68□□□□□ -1.34
CD46-211ENST00000464082 PRAMEF1O95521 474 aa6.68□□□□□ -1.34
CD46-211ENST00000464082 LDHBP07195 334 aaKnown RBP6.68□□□□□ -1.34
CD46-211ENST00000464082 MSL3P1P0C860 447 aa6.68□□□□□ -1.34
CD46-211ENST00000464082 GNA15P30679 374 aa6.68□□□□□ -1.34
CD46-211ENST00000464082 GBP1P32455 592 aa6.68□□□□□ -1.34
CD46-211ENST00000464082 CNR2P34972 360 aa6.68□□□□□ -1.34
CD46-211ENST00000464082 CCDC57Q2TAC2 916 aa6.68□□□□□ -1.34
CD46-211ENST00000464082 NBPF9Q3BBW0 867 aa6.68□□□□□ -1.34
CD46-211ENST00000464082 STRIP1Q5VSL9 837 aa6.68□□□□□ -1.34
CD46-211ENST00000464082 LDHAL6AQ6ZMR3 332 aa6.68□□□□□ -1.34
CD46-211ENST00000464082 ERICH6Q7L0X2 663 aa6.68□□□□□ -1.34
CD46-211ENST00000464082 SAPCD2Q86UD0 394 aa6.68□□□□□ -1.34
CD46-211ENST00000464082 USP48Q86UV5 1035 aa6.68□□□□□ -1.34
CD46-211ENST00000464082 ZSCAN29Q8IWY8 852 aaPredicted RBP6.68□□□□□ -1.34
CD46-211ENST00000464082 PHC3Q8NDX5 983 aa6.68□□□□□ -1.34
CD46-211ENST00000464082 NUP43Q8NFH3 380 aa6.68□□□□□ -1.34
CD46-211ENST00000464082 FRMD6Q96NE9 622 aa6.68□□□□□ -1.34
CD46-211ENST00000464082 ASB16Q96NS5 453 aa6.68□□□□□ -1.34
CD46-211ENST00000464082 MEIS3Q99687 375 aa6.68□□□□□ -1.34
CD46-211ENST00000464082 PRDM14Q9GZV8 571 aa6.68□□□□□ -1.34
CD46-211ENST00000464082 SCAND2PQ9GZW5 306 aaPredicted RBP6.68□□□□□ -1.34
CD46-211ENST00000464082 MYOZ2Q9NPC6 264 aa6.68□□□□□ -1.34
CD46-211ENST00000464082 ERVK13-1Q9NX77 482 aa6.68□□□□□ -1.34
CD46-211ENST00000464082 GGA3Q9NZ52 723 aa6.68□□□□□ -1.34
CD46-211ENST00000464082 ACSL6Q9UKU0 697 aa6.68□□□□□ -1.34
CD46-211ENST00000464082 SCAF8Q9UPN6 1271 aaKnown RBP6.68□□□□□ -1.34
CD46-211ENST00000464082 POLR3KQ9Y2Y1 108 aaPredicted RBP6.68□□□□□ -1.34
CD46-211ENST00000464082 PCDHAC2Q9Y5I4 1007 aa6.68□□□□□ -1.34
CD46-211ENST00000464082 HCFC2Q9Y5Z7 792 aa6.68□□□□□ -1.34
CD46-211ENST00000464082 PTPRFP10586 1907 aa6.68□□□□□ -1.34
CD46-211ENST00000464082 DOCK2Q92608 1830 aa6.67□□□□□ -1.34
CD46-211ENST00000464082 WNT10BO00744 389 aa6.67□□□□□ -1.34
CD46-211ENST00000464082 FOXN1O15353 648 aa6.67□□□□□ -1.34
CD46-211ENST00000464082 UBOX5O94941 541 aa6.67□□□□□ -1.34
CD46-211ENST00000464082 HTR3BO95264 441 aa6.67□□□□□ -1.34
CD46-211ENST00000464082 CELF2O95319 508 aaKnown RBP6.67□□□□□ -1.34
CD46-211ENST00000464082 TRIM27P14373 513 aa6.67□□□□□ -1.34
CD46-211ENST00000464082 FGFR2P21802 821 aa6.67□□□□□ -1.34
CD46-211ENST00000464082 UBE4AQ14139 1066 aa6.67□□□□□ -1.34
CD46-211ENST00000464082 DEFB115Q30KQ5 88 aa6.67□□□□□ -1.34
CD46-211ENST00000464082 INTS3Q68E01 1043 aaKnown RBP6.67□□□□□ -1.34
CD46-211ENST00000464082 TTLL5Q6EMB2 1281 aa6.67□□□□□ -1.34
CD46-211ENST00000464082 CYP4F22Q6NT55 531 aa6.67□□□□□ -1.34
CD46-211ENST00000464082 ATG9AQ7Z3C6 839 aa6.67□□□□□ -1.34
CD46-211ENST00000464082 KRT26Q7Z3Y9 468 aa6.67□□□□□ -1.34
CD46-211ENST00000464082 TDRD7Q8NHU6 1098 aaKnown RBP6.67□□□□□ -1.34
CD46-211ENST00000464082 ARHGAP45Q92619 1136 aa6.67□□□□□ -1.34
CD46-211ENST00000464082 FAM84BQ96KN1 310 aaPredicted RBP6.67□□□□□ -1.34
CD46-211ENST00000464082 GNEQ9Y223 722 aaKnown RBP6.67□□□□□ -1.34
CD46-211ENST00000464082 FAM205AQ6ZU69 1335 aa6.67□□□□□ -1.34
CD46-211ENST00000464082 WDR33Q9C0J8 1336 aaKnown RBP6.67□□□□□ -1.34
CD46-211ENST00000464082 PHIPQ8WWQ0 1821 aa6.66□□□□□ -1.34
CD46-211ENST00000464082 PLIN1O60240 522 aa6.66□□□□□ -1.34
CD46-211ENST00000464082 BPNT1O95861 308 aa6.66□□□□□ -1.34
CD46-211ENST00000464082 ITGB3P05106 788 aa6.66□□□□□ -1.34
CD46-211ENST00000464082 ATF2P15336 505 aa6.66□□□□□ -1.34
CD46-211ENST00000464082 PFKLP17858 780 aa6.66□□□□□ -1.34
CD46-211ENST00000464082 GYG1P46976 350 aa6.66□□□□□ -1.34
CD46-211ENST00000464082 MAPKAPK2P49137 400 aa6.66□□□□□ -1.34
CD46-211ENST00000464082 FKBP1AP62942 108 aaKnown RBP6.66□□□□□ -1.34
CD46-211ENST00000464082 ZC3H14Q6PJT7 736 aaKnown RBP6.66□□□□□ -1.34
CD46-211ENST00000464082 FBXO33Q7Z6M2 555 aa6.66□□□□□ -1.34
CD46-211ENST00000464082 KIAA0825Q8IV33 1275 aa6.66□□□□□ -1.34
CD46-211ENST00000464082 CDCA5Q96FF9 252 aa6.66□□□□□ -1.34
CD46-211ENST00000464082 RBM15Q96T37 977 aaKnown RBP eCLIP6.66□□□□□ -1.342e-10■■■■□ 23.5
CD46-211ENST00000464082 API5Q9BZZ5 524 aaKnown RBP6.66□□□□□ -1.34
CD46-211ENST00000464082 CNNM1Q9NRU3 951 aa6.66□□□□□ -1.34
CD46-211ENST00000464082 IMPACTQ9P2X3 320 aa6.66□□□□□ -1.34
CD46-211ENST00000464082 ABT1Q9ULW3 272 aaKnown RBP6.66□□□□□ -1.34
CD46-211ENST00000464082 LRRFIP2Q9Y608 721 aaKnown RBP6.66□□□□□ -1.34
CD46-211ENST00000464082 ZBED9Q6R2W3 1325 aa6.66□□□□□ -1.34
CD46-211ENST00000464082 MYO3BQ8WXR4 1341 aa6.66□□□□□ -1.34
CD46-211ENST00000464082 SIPA1L1O43166 1804 aa6.66□□□□□ -1.34
CD46-211ENST00000464082 ATAD5Q96QE3 1844 aa6.66□□□□□ -1.34
CD46-211ENST00000464082 MYH7P12883 1935 aa6.66□□□□□ -1.34
CD46-211ENST00000464082 MAST2Q6P0Q8 1798 aa6.65□□□□□ -1.34
CD46-211ENST00000464082 EYA2O00167 538 aa6.65□□□□□ -1.34
CD46-211ENST00000464082 RGS13O14921 159 aa6.65□□□□□ -1.34
CD46-211ENST00000464082 NOBOXO60393 691 aa6.65□□□□□ -1.34
CD46-211ENST00000464082 PDE8BO95263 885 aa6.65□□□□□ -1.34
CD46-211ENST00000464082 F13A1P00488 732 aa6.65□□□□□ -1.34
CD46-211ENST00000464082 RLBP1P12271 317 aa6.65□□□□□ -1.34
CD46-211ENST00000464082 KCNJ4P48050 445 aa6.65□□□□□ -1.34
CD46-211ENST00000464082 CHMP4BP1P59074 171 aa6.65□□□□□ -1.34
CD46-211ENST00000464082 DLX2Q07687 328 aaPredicted RBP6.65□□□□□ -1.34
CD46-211ENST00000464082 TAF7LQ5H9L4 462 aa6.65□□□□□ -1.34
CD46-211ENST00000464082 NBPF12Q5TAG4 269 aaPredicted RBP6.65□□□□□ -1.34
CD46-211ENST00000464082 ATF7IPQ6VMQ6 1270 aa6.65□□□□□ -1.34
CD46-211ENST00000464082 CAPNS2Q96L46 248 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms