RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 C9IYK1 514 aa16.21■□□□□ 0.19
SNRNP40-203ENST00000463988 MGEA5O60502 916 aa16.21■□□□□ 0.19
SNRNP40-203ENST00000463988 PSMD10O75832 226 aa16.21■□□□□ 0.19
SNRNP40-203ENST00000463988 CDKL5O76039 1030 aa16.21■□□□□ 0.19
SNRNP40-203ENST00000463988 FAM189BP81408 668 aa16.21■□□□□ 0.19
SNRNP40-203ENST00000463988 NPY5RQ15761 445 aa16.21■□□□□ 0.19
SNRNP40-203ENST00000463988 CTC1Q2NKJ3 1217 aa16.21■□□□□ 0.19
SNRNP40-203ENST00000463988 EFCAB12Q6NXP0 572 aa16.21■□□□□ 0.19
SNRNP40-203ENST00000463988 FAM178BQ8IXR5 827 aa16.21■□□□□ 0.19
SNRNP40-203ENST00000463988 MAP7D2Q96T17 732 aa16.21■□□□□ 0.19
SNRNP40-203ENST00000463988 OSMRQ99650 979 aa16.21■□□□□ 0.19
SNRNP40-203ENST00000463988 UNC45AQ9H3U1 944 aa16.21■□□□□ 0.19
SNRNP40-203ENST00000463988 FAM50BQ9Y247 325 aa16.21■□□□□ 0.19
SNRNP40-203ENST00000463988 VTNP04004 478 aa16.2■□□□□ 0.18
SNRNP40-203ENST00000463988 CLCN3P51790 818 aa16.2■□□□□ 0.18
SNRNP40-203ENST00000463988 PRKCEQ02156 737 aa16.2■□□□□ 0.18
SNRNP40-203ENST00000463988 DSC3Q14574 896 aa16.2■□□□□ 0.18
SNRNP40-203ENST00000463988 NONOQ15233 471 aaKnown RBP eCLIP16.2■□□□□ 0.18
SNRNP40-203ENST00000463988 B3GNT9Q6UX72 402 aa16.2■□□□□ 0.18
SNRNP40-203ENST00000463988 TRMT1LQ7Z2T5 733 aaKnown RBP16.2■□□□□ 0.18
SNRNP40-203ENST00000463988 KRT25Q7Z3Z0 450 aa16.2■□□□□ 0.18
SNRNP40-203ENST00000463988 FAM228AQ86W67 206 aa16.2■□□□□ 0.18
SNRNP40-203ENST00000463988 SPPL3Q8TCT6 385 aa16.2■□□□□ 0.18
SNRNP40-203ENST00000463988 LARP6Q9BRS8 491 aaKnown RBP16.2■□□□□ 0.18
SNRNP40-203ENST00000463988 ADAMTS10Q9H324 1103 aa16.2■□□□□ 0.18
SNRNP40-203ENST00000463988 ELAC1Q9H777 363 aaKnown RBP16.2■□□□□ 0.18
SNRNP40-203ENST00000463988 TMEM161AQ9NX61 479 aa16.2■□□□□ 0.18
SNRNP40-203ENST00000463988 WDR81Q562E7 1941 aa16.19■□□□□ 0.18
SNRNP40-203ENST00000463988 H3BQ06 376 aaPredicted RBP16.19■□□□□ 0.18
SNRNP40-203ENST00000463988 CHMP2AO43633 222 aa16.19■□□□□ 0.18
SNRNP40-203ENST00000463988 ITGB1P05556 798 aa16.19■□□□□ 0.18
SNRNP40-203ENST00000463988 COL9A1P20849 921 aa16.19■□□□□ 0.18
SNRNP40-203ENST00000463988 EIF4BP23588 611 aaKnown RBP16.19■□□□□ 0.18
SNRNP40-203ENST00000463988 NLRP11P59045 1033 aaKnown RBP16.19■□□□□ 0.18
SNRNP40-203ENST00000463988 ANAPC15P60006 121 aa16.19■□□□□ 0.18
SNRNP40-203ENST00000463988 HYAL1Q12794 435 aa16.19■□□□□ 0.18
SNRNP40-203ENST00000463988 STK3Q13188 491 aa16.19■□□□□ 0.18
SNRNP40-203ENST00000463988 CAMK1Q14012 370 aa16.19■□□□□ 0.18
SNRNP40-203ENST00000463988 TARBP2Q15633 366 aaKnown RBP16.19■□□□□ 0.18
SNRNP40-203ENST00000463988 UGCGQ16739 394 aa16.19■□□□□ 0.18
SNRNP40-203ENST00000463988 PAN2Q504Q3 1202 aaKnown RBP16.19■□□□□ 0.18
SNRNP40-203ENST00000463988 MIER3Q7Z3K6 550 aa16.19■□□□□ 0.18
SNRNP40-203ENST00000463988 KLHL23Q8NBE8 558 aa16.19■□□□□ 0.18
SNRNP40-203ENST00000463988 ETNPPLQ8TBG4 499 aa16.19■□□□□ 0.18
SNRNP40-203ENST00000463988 PPP2R3CQ969Q6 453 aa16.19■□□□□ 0.18
SNRNP40-203ENST00000463988 NIFKQ9BYG3 293 aaKnown RBP16.19■□□□□ 0.18
SNRNP40-203ENST00000463988 ALG13Q9NP73 1137 aaKnown RBP16.19■□□□□ 0.18
SNRNP40-203ENST00000463988 CLDND1Q9NY35 253 aa16.19■□□□□ 0.18
SNRNP40-203ENST00000463988 AKT3Q9Y243 479 aa16.19■□□□□ 0.18
SNRNP40-203ENST00000463988 STK36Q9NRP7 1315 aa16.19■□□□□ 0.18
SNRNP40-203ENST00000463988 PFKFB2O60825 505 aa16.18■□□□□ 0.18
SNRNP40-203ENST00000463988 TDP2O95551 362 aa16.18■□□□□ 0.18
SNRNP40-203ENST00000463988 IL9P15248 144 aa16.18■□□□□ 0.18
SNRNP40-203ENST00000463988 XBP1P17861 261 aa16.18■□□□□ 0.18
SNRNP40-203ENST00000463988 LTBRP36941 435 aa16.18■□□□□ 0.18
SNRNP40-203ENST00000463988 CDC42EP1Q00587 391 aa16.18■□□□□ 0.18
SNRNP40-203ENST00000463988 TBC1D8BQ0IIM8 1120 aa16.18■□□□□ 0.18
SNRNP40-203ENST00000463988 SCRN1Q12765 414 aa16.18■□□□□ 0.18
SNRNP40-203ENST00000463988 CSPP1Q1MSJ5 1256 aa16.18■□□□□ 0.18
SNRNP40-203ENST00000463988 XKR3Q5GH77 459 aa16.18■□□□□ 0.18
SNRNP40-203ENST00000463988 ERICH6BQ5W0A0 696 aa16.18■□□□□ 0.18
SNRNP40-203ENST00000463988 GJD3Q8N144 294 aa16.18■□□□□ 0.18
SNRNP40-203ENST00000463988 AIFM3Q96NN9 605 aa16.18■□□□□ 0.18
SNRNP40-203ENST00000463988 PPP1R16BQ96T49 567 aa16.18■□□□□ 0.18
SNRNP40-203ENST00000463988 PHF20Q9BVI0 1012 aa16.18■□□□□ 0.18
SNRNP40-203ENST00000463988 SLKQ9H2G2 1235 aaPredicted RBP16.18■□□□□ 0.18
SNRNP40-203ENST00000463988 EPHX3Q9H6B9 360 aa16.18■□□□□ 0.18
SNRNP40-203ENST00000463988 ATP6V0A4Q9HBG4 840 aa16.18■□□□□ 0.18
SNRNP40-203ENST00000463988 CD320Q9NPF0 282 aa16.18■□□□□ 0.18
SNRNP40-203ENST00000463988 AAASQ9NRG9 546 aa16.18■□□□□ 0.18
SNRNP40-203ENST00000463988 PRKAG3Q9UGI9 489 aa16.18■□□□□ 0.18
SNRNP40-203ENST00000463988 PCDHB12Q9Y5F1 795 aa16.18■□□□□ 0.18
SNRNP40-203ENST00000463988 TBKBP1A7MCY6 615 aa16.17■□□□□ 0.18
SNRNP40-203ENST00000463988 HOXA2O43364 376 aa16.17■□□□□ 0.18
SNRNP40-203ENST00000463988 DNAJB1P25685 340 aa16.17■□□□□ 0.18
SNRNP40-203ENST00000463988 GATMP50440 423 aa16.17■□□□□ 0.18
SNRNP40-203ENST00000463988 GPC3P51654 580 aa16.17■□□□□ 0.18
SNRNP40-203ENST00000463988 UBE3AQ05086 875 aa16.17■□□□□ 0.18
SNRNP40-203ENST00000463988 ANKRD1Q15327 319 aa16.17■□□□□ 0.18
SNRNP40-203ENST00000463988 FAM102BQ5T8I3 360 aa16.17■□□□□ 0.18
SNRNP40-203ENST00000463988 EP400NLQ6ZTU2 488 aa16.17■□□□□ 0.18
SNRNP40-203ENST00000463988 LRRC71Q8N4P6 559 aa16.17■□□□□ 0.18
SNRNP40-203ENST00000463988 GJA10Q969M2 543 aa16.17■□□□□ 0.18
SNRNP40-203ENST00000463988 PPP4R2Q9NY27 417 aa16.17■□□□□ 0.18
SNRNP40-203ENST00000463988 DDX25Q9UHL0 483 aaKnown RBP16.17■□□□□ 0.18
SNRNP40-203ENST00000463988 ATG2AQ2TAZ0 1938 aa16.17■□□□□ 0.18
SNRNP40-203ENST00000463988 IGKV6-21A0A0C4DH24 114 aa16.16■□□□□ 0.18
SNRNP40-203ENST00000463988 CCDC194A0A1B0GVG4 234 aa16.16■□□□□ 0.18
SNRNP40-203ENST00000463988 PI4K2BG5E9Z4 385 aa16.16■□□□□ 0.18
SNRNP40-203ENST00000463988 STBD1O95210 358 aa16.16■□□□□ 0.18
SNRNP40-203ENST00000463988 DARSP14868 501 aaKnown RBP16.16■□□□□ 0.18
SNRNP40-203ENST00000463988 GCFC2P16383 781 aaKnown RBP16.16■□□□□ 0.18
SNRNP40-203ENST00000463988 ZSCAN20P17040 1043 aaPredicted RBP16.16■□□□□ 0.18
SNRNP40-203ENST00000463988 ADAM15Q13444 863 aa16.16■□□□□ 0.18
SNRNP40-203ENST00000463988 INF2Q27J81 1249 aa16.16■□□□□ 0.18
SNRNP40-203ENST00000463988 PPP4R3AQ6IN85 833 aa16.16■□□□□ 0.18
SNRNP40-203ENST00000463988 POF1BQ8WVV4 589 aa16.16■□□□□ 0.18
SNRNP40-203ENST00000463988 FAM20AQ96MK3 541 aa16.16■□□□□ 0.18
SNRNP40-203ENST00000463988 CEP89Q96ST8 783 aa16.16■□□□□ 0.18
SNRNP40-203ENST00000463988 NAP1L4Q99733 375 aaKnown RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms