RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 CCSAPQ6IQ19 270 aaPredicted RBP3.92□□□□□ -1.78
COL8A1-205ENST00000463753 TMEM214Q6NUQ4 689 aaKnown RBP3.92□□□□□ -1.78
COL8A1-205ENST00000463753 CYP26C1Q6V0L0 522 aa3.92□□□□□ -1.78
COL8A1-205ENST00000463753 PPFIBP1Q86W92 1011 aa3.92□□□□□ -1.78
COL8A1-205ENST00000463753 GPC2Q8N158 579 aa3.92□□□□□ -1.78
COL8A1-205ENST00000463753 TSPYL6Q8N831 410 aa3.92□□□□□ -1.78
COL8A1-205ENST00000463753 ANKRD44Q8N8A2 993 aa3.92□□□□□ -1.78
COL8A1-205ENST00000463753 ANKS4BQ8N8V4 417 aa3.92□□□□□ -1.78
COL8A1-205ENST00000463753 CCDC197Q8NCU1 140 aa3.92□□□□□ -1.78
COL8A1-205ENST00000463753 PPFIBP2Q8ND30 876 aa3.92□□□□□ -1.78
COL8A1-205ENST00000463753 MORC4Q8TE76 937 aa3.92□□□□□ -1.78
COL8A1-205ENST00000463753 KLHL29Q96CT2 875 aa3.92□□□□□ -1.78
COL8A1-205ENST00000463753 DNAJC1Q96KC8 554 aaKnown RBP3.92□□□□□ -1.78
COL8A1-205ENST00000463753 TRAPPC9Q96Q05 1148 aa3.92□□□□□ -1.78
COL8A1-205ENST00000463753 PSMB7Q99436 277 aa3.92□□□□□ -1.78
COL8A1-205ENST00000463753 DDX50Q9BQ39 737 aaKnown RBP3.92□□□□□ -1.78
COL8A1-205ENST00000463753 CARD14Q9BXL6 1004 aa3.92□□□□□ -1.78
COL8A1-205ENST00000463753 LUC7LQ9NQ29 371 aaKnown RBP3.92□□□□□ -1.78
COL8A1-205ENST00000463753 INTS13Q9NVM9 706 aa3.92□□□□□ -1.78
COL8A1-205ENST00000463753 RMND1Q9NWS8 449 aa3.92□□□□□ -1.78
COL8A1-205ENST00000463753 GGA2Q9UJY4 613 aa3.92□□□□□ -1.78
COL8A1-205ENST00000463753 TFR2Q9UP52 801 aa3.92□□□□□ -1.78
COL8A1-205ENST00000463753 AGAP1Q9UPQ3 857 aa3.92□□□□□ -1.78
COL8A1-205ENST00000463753 ANKRD36CQ5JPF3 1778 aa3.92□□□□□ -1.78
COL8A1-205ENST00000463753 LTBP2Q14767 1821 aa3.91□□□□□ -1.78
COL8A1-205ENST00000463753 A0A0J9YVX5 310 aa3.91□□□□□ -1.78
COL8A1-205ENST00000463753 TARSL2A2RTX5 802 aaKnown RBP3.91□□□□□ -1.78
COL8A1-205ENST00000463753 ZNF233A6NK53 670 aa3.91□□□□□ -1.78
COL8A1-205ENST00000463753 TRIM64CA6NLI5 447 aa3.91□□□□□ -1.78
COL8A1-205ENST00000463753 SFI1A8K8P3 1242 aa3.91□□□□□ -1.78
COL8A1-205ENST00000463753 LCE2BO14633 110 aa3.91□□□□□ -1.78
COL8A1-205ENST00000463753 RAB11FIP3O75154 756 aa3.91□□□□□ -1.78
COL8A1-205ENST00000463753 TACC1O75410 805 aa3.91□□□□□ -1.78
COL8A1-205ENST00000463753 PDGFRBP09619 1106 aa3.91□□□□□ -1.78
COL8A1-205ENST00000463753 UBTFL6P0CB48 400 aaPredicted RBP3.91□□□□□ -1.78
COL8A1-205ENST00000463753 ZCCHC18P0CG32 403 aa3.91□□□□□ -1.78
COL8A1-205ENST00000463753 EPB41P11171 864 aaKnown RBP3.91□□□□□ -1.78
COL8A1-205ENST00000463753 ENDOUP21128 410 aaKnown RBP3.91□□□□□ -1.78
COL8A1-205ENST00000463753 BDNFP23560 247 aa3.91□□□□□ -1.78
COL8A1-205ENST00000463753 IL4RP24394 825 aa3.91□□□□□ -1.78
COL8A1-205ENST00000463753 SERPINB3P29508 390 aa3.91□□□□□ -1.78
COL8A1-205ENST00000463753 GBP1P32455 592 aa3.91□□□□□ -1.78
COL8A1-205ENST00000463753 CCR3P51677 355 aa3.91□□□□□ -1.78
COL8A1-205ENST00000463753 ERVK-9P63128 1117 aa3.91□□□□□ -1.78
COL8A1-205ENST00000463753 PHEXP78562 749 aa3.91□□□□□ -1.78
COL8A1-205ENST00000463753 RNASELQ05823 741 aaKnown RBP3.91□□□□□ -1.78
COL8A1-205ENST00000463753 PDE4BQ07343 736 aa3.91□□□□□ -1.78
COL8A1-205ENST00000463753 TBL3Q12788 808 aaKnown RBP3.91□□□□□ -1.78
COL8A1-205ENST00000463753 BYSLQ13895 437 aaKnown RBP3.91□□□□□ -1.78
COL8A1-205ENST00000463753 KRT72Q14CN4 511 aa3.91□□□□□ -1.78
COL8A1-205ENST00000463753 IFI16Q16666 785 aaKnown RBP3.91□□□□□ -1.78
COL8A1-205ENST00000463753 CLPPQ16740 277 aaPredicted RBP3.91□□□□□ -1.78
COL8A1-205ENST00000463753 CREB3L3Q68CJ9 461 aa3.91□□□□□ -1.78
COL8A1-205ENST00000463753 OR52E8Q6IFG1 317 aa3.91□□□□□ -1.78
COL8A1-205ENST00000463753 C1orf228Q6PIY5 440 aa3.91□□□□□ -1.78
COL8A1-205ENST00000463753 OLFM4Q6UX06 510 aa3.91□□□□□ -1.78
COL8A1-205ENST00000463753 ZC3H18Q86VM9 953 aaKnown RBP3.91□□□□□ -1.78
COL8A1-205ENST00000463753 RNF10Q8N5U6 811 aaKnown RBP3.91□□□□□ -1.78
COL8A1-205ENST00000463753 MLKLQ8NB16 471 aa3.91□□□□□ -1.78
COL8A1-205ENST00000463753 KLHDC4Q8TBB5 520 aa3.91□□□□□ -1.78
COL8A1-205ENST00000463753 MRPS27Q92552 414 aaKnown RBP3.91□□□□□ -1.78
COL8A1-205ENST00000463753 CCDC127Q96BQ5 260 aa3.91□□□□□ -1.78
COL8A1-205ENST00000463753 LENG1Q96BZ8 264 aaPredicted RBP3.91□□□□□ -1.78
COL8A1-205ENST00000463753 DYDC2Q96IM9 177 aa3.91□□□□□ -1.78
COL8A1-205ENST00000463753 ATP6V1G3Q96LB4 118 aa3.91□□□□□ -1.78
COL8A1-205ENST00000463753 LRRC1Q9BTT6 524 aa3.91□□□□□ -1.78
COL8A1-205ENST00000463753 DDX23Q9BUQ8 820 aaKnown RBP3.91□□□□□ -1.78
COL8A1-205ENST00000463753 TUT1Q9H6E5 874 aaKnown RBP3.91□□□□□ -1.78
COL8A1-205ENST00000463753 SYNCQ9H7C4 482 aa3.91□□□□□ -1.78
COL8A1-205ENST00000463753 ECT2Q9H8V3 914 aa3.91□□□□□ -1.78
COL8A1-205ENST00000463753 TRPV5Q9NQA5 729 aa3.91□□□□□ -1.78
COL8A1-205ENST00000463753 ADAM22Q9P0K1 906 aa3.91□□□□□ -1.78
COL8A1-205ENST00000463753 NKX1-2Q9UD57 310 aaPredicted RBP3.91□□□□□ -1.78
COL8A1-205ENST00000463753 DMGDHQ9UI17 866 aaKnown RBP3.91□□□□□ -1.78
COL8A1-205ENST00000463753 TMED5Q9Y3A6 229 aa3.91□□□□□ -1.78
COL8A1-205ENST00000463753 SAR1BQ9Y6B6 198 aa3.91□□□□□ -1.78
COL8A1-205ENST00000463753 CASP8AP2Q9UKL3 1982 aa3.91□□□□□ -1.78
COL8A1-205ENST00000463753 NPHP3-ACAD11A0A0J9YXS1 232 aa3.91□□□□□ -1.78
COL8A1-205ENST00000463753 ESYT3A0FGR9 886 aa3.91□□□□□ -1.78
COL8A1-205ENST00000463753 CFAP73A6NFT4 308 aa3.91□□□□□ -1.78
COL8A1-205ENST00000463753 POM121CA8CG34 1229 aa3.91□□□□□ -1.78
COL8A1-205ENST00000463753 TRAPPC3O43617 180 aa3.91□□□□□ -1.78
COL8A1-205ENST00000463753 STK10O94804 968 aaKnown RBP3.91□□□□□ -1.78
COL8A1-205ENST00000463753 LDHCP07864 332 aa3.91□□□□□ -1.78
COL8A1-205ENST00000463753 NR3C2P08235 984 aa3.91□□□□□ -1.78
COL8A1-205ENST00000463753 GHRP10912 638 aa3.91□□□□□ -1.78
COL8A1-205ENST00000463753 BCRP11274 1271 aa3.91□□□□□ -1.78
COL8A1-205ENST00000463753 TIMP2P16035 220 aa3.91□□□□□ -1.78
COL8A1-205ENST00000463753 ATP6V1C1P21283 382 aa3.91□□□□□ -1.78
COL8A1-205ENST00000463753 IGHMBP2P38935 993 aaKnown RBP3.91□□□□□ -1.78
COL8A1-205ENST00000463753 HALP42357 657 aa3.91□□□□□ -1.78
COL8A1-205ENST00000463753 PMS2P54278 862 aa3.91□□□□□ -1.78
COL8A1-205ENST00000463753 ADARP55265 1226 aaKnown RBP3.91□□□□□ -1.78
COL8A1-205ENST00000463753 ITIH3Q06033 890 aa3.91□□□□□ -1.78
COL8A1-205ENST00000463753 PPARAQ07869 468 aa3.91□□□□□ -1.78
COL8A1-205ENST00000463753 RBL2Q08999 1139 aa3.91□□□□□ -1.78
COL8A1-205ENST00000463753 FOXC1Q12948 553 aa3.91□□□□□ -1.78
COL8A1-205ENST00000463753 RESTQ13127 1097 aa3.91□□□□□ -1.78
COL8A1-205ENST00000463753 PTK7Q13308 1070 aa3.91□□□□□ -1.78
COL8A1-205ENST00000463753 MAP7Q14244 749 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms