RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 KIZQ2M2Z5 673 aa23.17■■□□□ 1.3
PDLIM4-205ENST00000463615 LEXMQ3ZCV2 418 aa23.17■■□□□ 1.3
PDLIM4-205ENST00000463615 PPP4R3AQ6IN85 833 aa23.17■■□□□ 1.3
PDLIM4-205ENST00000463615 NIFKQ9BYG3 293 aaKnown RBP23.17■■□□□ 1.3
PDLIM4-205ENST00000463615 NSUN3Q9H649 340 aaKnown RBP23.17■■□□□ 1.3
PDLIM4-205ENST00000463615 GINS2Q9Y248 185 aa23.17■■□□□ 1.3
PDLIM4-205ENST00000463615 TCF20Q9UGU0 1960 aaKnown RBP23.17■■□□□ 1.3
PDLIM4-205ENST00000463615 C9IYK1 514 aa23.16■■□□□ 1.3
PDLIM4-205ENST00000463615 MGEA5O60502 916 aa23.16■■□□□ 1.3
PDLIM4-205ENST00000463615 STBD1O95210 358 aa23.16■■□□□ 1.3
PDLIM4-205ENST00000463615 CTDNEP1O95476 244 aa23.16■■□□□ 1.3
PDLIM4-205ENST00000463615 TMOD1P28289 359 aa23.16■■□□□ 1.3
PDLIM4-205ENST00000463615 FAM189BP81408 668 aa23.16■■□□□ 1.3
PDLIM4-205ENST00000463615 EFCAB12Q6NXP0 572 aa23.16■■□□□ 1.3
PDLIM4-205ENST00000463615 SLC24A5Q71RS6 500 aa23.16■■□□□ 1.3
PDLIM4-205ENST00000463615 FAM228AQ86W67 206 aa23.16■■□□□ 1.3
PDLIM4-205ENST00000463615 METTL13Q8N6R0 699 aa23.16■■□□□ 1.3
PDLIM4-205ENST00000463615 NEK9Q8TD19 979 aa23.16■■□□□ 1.3
PDLIM4-205ENST00000463615 MAP7D2Q96T17 732 aa23.16■■□□□ 1.3
PDLIM4-205ENST00000463615 OSMRQ99650 979 aa23.16■■□□□ 1.3
PDLIM4-205ENST00000463615 ADAMTS10Q9H324 1103 aa23.16■■□□□ 1.3
PDLIM4-205ENST00000463615 KCNJ14Q9UNX9 436 aa23.16■■□□□ 1.3
PDLIM4-205ENST00000463615 MRPL42Q9Y6G3 142 aaKnown RBP23.16■■□□□ 1.3
PDLIM4-205ENST00000463615 VTNP04004 478 aa23.15■■□□□ 1.3
PDLIM4-205ENST00000463615 GCFC2P16383 781 aaKnown RBP23.15■■□□□ 1.3
PDLIM4-205ENST00000463615 CLCN3P51790 818 aa23.15■■□□□ 1.3
PDLIM4-205ENST00000463615 AK2P54819 239 aa23.15■■□□□ 1.3
PDLIM4-205ENST00000463615 DSC3Q14574 896 aa23.15■■□□□ 1.3
PDLIM4-205ENST00000463615 INF2Q27J81 1249 aa23.15■■□□□ 1.3
PDLIM4-205ENST00000463615 XKR3Q5GH77 459 aa23.15■■□□□ 1.3
PDLIM4-205ENST00000463615 MIER3Q7Z3K6 550 aa23.15■■□□□ 1.3
PDLIM4-205ENST00000463615 GJA10Q969M2 543 aa23.15■■□□□ 1.3
PDLIM4-205ENST00000463615 PABPC5Q96DU9 382 aaKnown RBP23.15■■□□□ 1.3
PDLIM4-205ENST00000463615 FAM20AQ96MK3 541 aa23.15■■□□□ 1.3
PDLIM4-205ENST00000463615 NECAB3Q96P71 396 aaPredicted RBP23.15■■□□□ 1.3
PDLIM4-205ENST00000463615 CEP89Q96ST8 783 aa23.15■■□□□ 1.3
PDLIM4-205ENST00000463615 ADAM2Q99965 735 aa23.15■■□□□ 1.3
PDLIM4-205ENST00000463615 KCNMB3Q9NPA1 279 aa23.15■■□□□ 1.3
PDLIM4-205ENST00000463615 DDX25Q9UHL0 483 aaKnown RBP23.15■■□□□ 1.3
PDLIM4-205ENST00000463615 GRM6O15303 877 aa23.14■■□□□ 1.29
PDLIM4-205ENST00000463615 CHMP2AO43633 222 aa23.14■■□□□ 1.29
PDLIM4-205ENST00000463615 NCK2O43639 380 aa23.14■■□□□ 1.29
PDLIM4-205ENST00000463615 MMP1P03956 469 aa23.14■■□□□ 1.29
PDLIM4-205ENST00000463615 TCEAL5Q5H9L2 206 aa23.14■■□□□ 1.29
PDLIM4-205ENST00000463615 WASF1Q92558 559 aa23.14■■□□□ 1.29
PDLIM4-205ENST00000463615 ELAC1Q9H777 363 aaKnown RBP23.14■■□□□ 1.29
PDLIM4-205ENST00000463615 LRFN2Q9ULH4 789 aa23.14■■□□□ 1.29
PDLIM4-205ENST00000463615 PCDHB7Q9Y5E2 793 aa23.14■■□□□ 1.29
PDLIM4-205ENST00000463615 IGKV6-21A0A0C4DH24 114 aa23.13■■□□□ 1.29
PDLIM4-205ENST00000463615 CCDC194A0A1B0GVG4 234 aa23.13■■□□□ 1.29
PDLIM4-205ENST00000463615 DENND3A2RUS2 1198 aa23.13■■□□□ 1.29
PDLIM4-205ENST00000463615 TBX3O15119 743 aa23.13■■□□□ 1.29
PDLIM4-205ENST00000463615 SLC37A4O43826 429 aa23.13■■□□□ 1.29
PDLIM4-205ENST00000463615 EIF4BP23588 611 aaKnown RBP23.13■■□□□ 1.29
PDLIM4-205ENST00000463615 NLRP11P59045 1033 aaKnown RBP23.13■■□□□ 1.29
PDLIM4-205ENST00000463615 PPP2R5CQ13362 524 aa23.13■■□□□ 1.29
PDLIM4-205ENST00000463615 PUS10Q3MIT2 529 aaKnown RBP23.13■■□□□ 1.29
PDLIM4-205ENST00000463615 TRMT1LQ7Z2T5 733 aaKnown RBP23.13■■□□□ 1.29
PDLIM4-205ENST00000463615 NEK8Q86SG6 692 aa23.13■■□□□ 1.29
PDLIM4-205ENST00000463615 NAP1L4Q99733 375 aaKnown RBP23.13■■□□□ 1.29
PDLIM4-205ENST00000463615 TMEM161AQ9NX61 479 aa23.13■■□□□ 1.29
PDLIM4-205ENST00000463615 PLAGL2Q9UPG8 496 aa23.13■■□□□ 1.29
PDLIM4-205ENST00000463615 MYO7AQ13402 2215 aa23.13■■□□□ 1.29
PDLIM4-205ENST00000463615 FDPSP14324 419 aaKnown RBP23.12■■□□□ 1.29
PDLIM4-205ENST00000463615 GPC3P51654 580 aa23.12■■□□□ 1.29
PDLIM4-205ENST00000463615 CDC42EP1Q00587 391 aa23.12■■□□□ 1.29
PDLIM4-205ENST00000463615 TBC1D8BQ0IIM8 1120 aa23.12■■□□□ 1.29
PDLIM4-205ENST00000463615 CAMK1Q14012 370 aa23.12■■□□□ 1.29
PDLIM4-205ENST00000463615 LETM2Q2VYF4 491 aa23.12■■□□□ 1.29
PDLIM4-205ENST00000463615 LRRC71Q8N4P6 559 aa23.12■■□□□ 1.29
PDLIM4-205ENST00000463615 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.12■■□□□ 1.29
PDLIM4-205ENST00000463615 GTF3C6Q969F1 213 aa23.12■■□□□ 1.29
PDLIM4-205ENST00000463615 ORC3Q9UBD5 711 aaPredicted RBP23.12■■□□□ 1.29
PDLIM4-205ENST00000463615 VAV3Q9UKW4 847 aa23.12■■□□□ 1.29
PDLIM4-205ENST00000463615 AKT3Q9Y243 479 aa23.12■■□□□ 1.29
PDLIM4-205ENST00000463615 KCNA5P22460 613 aa23.11■■□□□ 1.29
PDLIM4-205ENST00000463615 ME3Q16798 604 aa23.11■■□□□ 1.29
PDLIM4-205ENST00000463615 CTC1Q2NKJ3 1217 aa23.11■■□□□ 1.29
PDLIM4-205ENST00000463615 ATG2AQ2TAZ0 1938 aa23.11■■□□□ 1.29
PDLIM4-205ENST00000463615 DARSP14868 501 aaKnown RBP23.1■■□□□ 1.29
PDLIM4-205ENST00000463615 PSMC5P62195 406 aa23.1■■□□□ 1.29
PDLIM4-205ENST00000463615 SPPL3Q8TCT6 385 aa23.1■■□□□ 1.29
PDLIM4-205ENST00000463615 OXER1Q8TDS5 423 aa23.1■■□□□ 1.29
PDLIM4-205ENST00000463615 TNFRSF25Q93038 417 aa23.1■■□□□ 1.29
PDLIM4-205ENST00000463615 PPP1R16BQ96T49 567 aa23.1■■□□□ 1.29
PDLIM4-205ENST00000463615 GJB4Q9NTQ9 266 aa23.1■■□□□ 1.29
PDLIM4-205ENST00000463615 KIAA1671Q9BY89 1806 aa23.1■■□□□ 1.29
PDLIM4-205ENST00000463615 FNDC1Q4ZHG4 1894 aaPredicted RBP23.09■■□□□ 1.29
PDLIM4-205ENST00000463615 ITGB1P05556 798 aa23.09■■□□□ 1.29
PDLIM4-205ENST00000463615 GATMP50440 423 aa23.09■■□□□ 1.29
PDLIM4-205ENST00000463615 HAS1Q92839 578 aa23.09■■□□□ 1.29
PDLIM4-205ENST00000463615 SEPT9Q9UHD8 586 aaPredicted RBP23.09■■□□□ 1.29
PDLIM4-205ENST00000463615 PPME1Q9Y570 386 aa23.09■■□□□ 1.29
PDLIM4-205ENST00000463615 GRXCR2A6NFK2 248 aa23.08■■□□□ 1.29
PDLIM4-205ENST00000463615 EML1O00423 815 aa23.08■■□□□ 1.29
PDLIM4-205ENST00000463615 DKC1O60832 514 aaKnown RBP eCLIP23.08■■□□□ 1.29
PDLIM4-205ENST00000463615 MAFO75444 373 aaPredicted RBP23.08■■□□□ 1.29
PDLIM4-205ENST00000463615 PAN2Q504Q3 1202 aaKnown RBP23.08■■□□□ 1.29
PDLIM4-205ENST00000463615 FAM102BQ5T8I3 360 aa23.08■■□□□ 1.29
PDLIM4-205ENST00000463615 PIK3AP1Q6ZUJ8 805 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms