RNA–Protein interactions for RNA: ENST00000463147.1

USH2A-203, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 618 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-203ENST00000463147 FOXN1O15353 648 aa5.78□□□□□ -1.48
USH2A-203ENST00000463147 ADCY3O60266 1144 aa5.78□□□□□ -1.48
USH2A-203ENST00000463147 PTGS1P23219 599 aa5.78□□□□□ -1.48
USH2A-203ENST00000463147 GRIA2P42262 883 aa5.78□□□□□ -1.48
USH2A-203ENST00000463147 KCNQ1P51787 676 aa5.78□□□□□ -1.48
USH2A-203ENST00000463147 SSRP1Q08945 709 aaKnown RBP5.78□□□□□ -1.48
USH2A-203ENST00000463147 PLEKHG6Q3KR16 790 aa5.78□□□□□ -1.48
USH2A-203ENST00000463147 FOXB2Q5VYV0 432 aa5.78□□□□□ -1.48
USH2A-203ENST00000463147 PCSK4Q6UW60 755 aa5.78□□□□□ -1.48
USH2A-203ENST00000463147 EP400NLQ6ZTU2 488 aa5.78□□□□□ -1.48
USH2A-203ENST00000463147 ANKRD35Q8N283 1001 aa5.78□□□□□ -1.48
USH2A-203ENST00000463147 ST13P5Q8NFI4 369 aaPredicted RBP5.78□□□□□ -1.48
USH2A-203ENST00000463147 CFHR4Q92496 578 aa5.78□□□□□ -1.48
USH2A-203ENST00000463147 WNK4Q96J92 1243 aa5.78□□□□□ -1.48
USH2A-203ENST00000463147 FEZ1Q99689 392 aa5.78□□□□□ -1.48
USH2A-203ENST00000463147 INCENPQ9NQS7 918 aa5.78□□□□□ -1.48
USH2A-203ENST00000463147 DDX56Q9NY93 547 aaKnown RBP5.78□□□□□ -1.48
USH2A-203ENST00000463147 RHOBTB3O94955 611 aa5.77□□□□□ -1.49
USH2A-203ENST00000463147 FBLP22087 321 aaKnown RBP5.77□□□□□ -1.49
USH2A-203ENST00000463147 ATXN1P54253 815 aaKnown RBP5.77□□□□□ -1.49
USH2A-203ENST00000463147 CRHR2Q13324 411 aa5.77□□□□□ -1.49
USH2A-203ENST00000463147 STILQ15468 1287 aa5.77□□□□□ -1.49
USH2A-203ENST00000463147 TRIM68Q6AZZ1 485 aa5.77□□□□□ -1.49
USH2A-203ENST00000463147 STYK1Q6J9G0 422 aa5.77□□□□□ -1.49
USH2A-203ENST00000463147 ZNF627Q7L945 461 aa5.77□□□□□ -1.49
USH2A-203ENST00000463147 RTKN2Q8IZC4 609 aa5.77□□□□□ -1.49
USH2A-203ENST00000463147 TTPALQ9BTX7 342 aa5.77□□□□□ -1.49
USH2A-203ENST00000463147 BTBD2Q9BX70 525 aa5.77□□□□□ -1.49
USH2A-203ENST00000463147 RIC8BQ9NVN3 520 aa5.77□□□□□ -1.49
USH2A-203ENST00000463147 SLC26A4O43511 780 aa5.76□□□□□ -1.49
USH2A-203ENST00000463147 VIL1P09327 827 aaKnown RBP5.76□□□□□ -1.49
USH2A-203ENST00000463147 FGFR1P11362 822 aa5.76□□□□□ -1.49
USH2A-203ENST00000463147 PTPN1P18031 435 aaKnown RBP5.76□□□□□ -1.49
USH2A-203ENST00000463147 LMO1P25800 156 aa5.76□□□□□ -1.49
USH2A-203ENST00000463147 PTGS2P35354 604 aa5.76□□□□□ -1.49
USH2A-203ENST00000463147 EVA1CP58658 441 aa5.76□□□□□ -1.49
USH2A-203ENST00000463147 PCOLCEQ15113 449 aa5.76□□□□□ -1.49
USH2A-203ENST00000463147 TBR1Q16650 682 aa5.76□□□□□ -1.49
USH2A-203ENST00000463147 OTOP2Q7RTS6 562 aa5.76□□□□□ -1.49
USH2A-203ENST00000463147 AARSD1Q9BTE6 412 aaKnown RBP5.76□□□□□ -1.49
USH2A-203ENST00000463147 SLKQ9H2G2 1235 aaPredicted RBP5.76□□□□□ -1.49
USH2A-203ENST00000463147 SRPK3Q9UPE1 567 aa5.76□□□□□ -1.49
USH2A-203ENST00000463147 A0A0G2JNJ9 132 aa5.75□□□□□ -1.49
USH2A-203ENST00000463147 MRE11P49959 708 aa5.75□□□□□ -1.49
USH2A-203ENST00000463147 HERVK_113P62684 666 aa5.75□□□□□ -1.49
USH2A-203ENST00000463147 IL13RA1P78552 427 aa5.75□□□□□ -1.49
USH2A-203ENST00000463147 GPR19Q15760 415 aa5.75□□□□□ -1.49
USH2A-203ENST00000463147 LAIR1Q6GTX8 287 aa5.75□□□□□ -1.49
USH2A-203ENST00000463147 LARP4Q71RC2 724 aaKnown RBP eCLIP5.75□□□□□ -1.49
USH2A-203ENST00000463147 SHCBP1Q8NEM2 672 aa5.75□□□□□ -1.49
USH2A-203ENST00000463147 LPPQ93052 612 aa5.75□□□□□ -1.49
USH2A-203ENST00000463147 ZNF669Q96BR6 464 aaPredicted RBP5.75□□□□□ -1.49
USH2A-203ENST00000463147 SPATA9Q9BWV2 254 aa5.75□□□□□ -1.49
USH2A-203ENST00000463147 CD244Q9BZW8 370 aa5.75□□□□□ -1.49
USH2A-203ENST00000463147 KIAA1683Q9H0B3 1180 aa5.75□□□□□ -1.49
USH2A-203ENST00000463147 METTL14Q9HCE5 456 aaKnown RBP5.75□□□□□ -1.49
USH2A-203ENST00000463147 Q9UFV3 132 aa5.75□□□□□ -1.49
USH2A-203ENST00000463147 ATP23Q9Y6H3 246 aa5.75□□□□□ -1.49
USH2A-203ENST00000463147 KCNQ2O43526 872 aa5.74□□□□□ -1.49
USH2A-203ENST00000463147 BMP5P22003 454 aa5.74□□□□□ -1.49
USH2A-203ENST00000463147 CDKN1CP49918 316 aaPredicted RBP5.74□□□□□ -1.49
USH2A-203ENST00000463147 HNRNPA0Q13151 305 aaKnown RBP5.74□□□□□ -1.49
USH2A-203ENST00000463147 RRP1BQ14684 758 aaKnown RBP5.74□□□□□ -1.49
USH2A-203ENST00000463147 TCEA2Q15560 299 aa5.74□□□□□ -1.49
USH2A-203ENST00000463147 KCNT2Q6UVM3 1135 aa5.74□□□□□ -1.49
USH2A-203ENST00000463147 NOL8Q76FK4 1167 aaKnown RBP5.74□□□□□ -1.49
USH2A-203ENST00000463147 KRT26Q7Z3Y9 468 aa5.74□□□□□ -1.49
USH2A-203ENST00000463147 GPR135Q8IZ08 494 aa5.74□□□□□ -1.49
USH2A-203ENST00000463147 ZBTB38Q8NAP3 1195 aaPredicted RBP5.74□□□□□ -1.49
USH2A-203ENST00000463147 EXOC2Q96KP1 924 aa5.74□□□□□ -1.49
USH2A-203ENST00000463147 IPPKQ9H8X2 491 aa5.74□□□□□ -1.49
USH2A-203ENST00000463147 SLC2A4RGQ9NR83 387 aa5.74□□□□□ -1.49
USH2A-203ENST00000463147 A0A087X0B3 334 aa5.73□□□□□ -1.49
USH2A-203ENST00000463147 PPFIA4O75335 1185 aa5.73□□□□□ -1.49
USH2A-203ENST00000463147 NAT1P18440 290 aa5.73□□□□□ -1.49
USH2A-203ENST00000463147 ADCY8P40145 1251 aa5.73□□□□□ -1.49
USH2A-203ENST00000463147 CCDC142Q17RM4 750 aa5.73□□□□□ -1.49
USH2A-203ENST00000463147 TM4SF20Q53R12 229 aa5.73□□□□□ -1.49
USH2A-203ENST00000463147 FIGNQ5HY92 759 aa5.73□□□□□ -1.49
USH2A-203ENST00000463147 TMEM200BQ69YZ2 307 aa5.73□□□□□ -1.49
USH2A-203ENST00000463147 NSMFQ6X4W1 530 aa5.73□□□□□ -1.49
USH2A-203ENST00000463147 THNSL2Q86YJ6 484 aa5.73□□□□□ -1.49
USH2A-203ENST00000463147 DHX37Q8IY37 1157 aaKnown RBP5.73□□□□□ -1.49
USH2A-203ENST00000463147 SH3RF2Q8TEC5 729 aa5.73□□□□□ -1.49
USH2A-203ENST00000463147 SLC52A1Q9NWF4 448 aa5.73□□□□□ -1.49
USH2A-203ENST00000463147 G3BP2Q9UN86 482 aaKnown RBP5.73□□□□□ -1.49
USH2A-203ENST00000463147 FAM90A27PA6NNH2 459 aa5.72□□□□□ -1.49
USH2A-203ENST00000463147 TRAF5O00463 557 aa5.72□□□□□ -1.49
USH2A-203ENST00000463147 GSTA4O15217 222 aa5.72□□□□□ -1.49
USH2A-203ENST00000463147 PRODHO43272 600 aa5.72□□□□□ -1.49
USH2A-203ENST00000463147 PDGFRBP09619 1106 aa5.72□□□□□ -1.49
USH2A-203ENST00000463147 AOAHP28039 575 aa5.72□□□□□ -1.49
USH2A-203ENST00000463147 ADRA1BP35368 520 aa5.72□□□□□ -1.49
USH2A-203ENST00000463147 HGFACQ04756 655 aa5.72□□□□□ -1.49
USH2A-203ENST00000463147 PAK1Q13153 545 aa5.72□□□□□ -1.49
USH2A-203ENST00000463147 CNGB1Q14028 1251 aaPredicted RBP5.72□□□□□ -1.49
USH2A-203ENST00000463147 LRCH2Q5VUJ6 765 aa5.72□□□□□ -1.49
USH2A-203ENST00000463147 YOD1Q5VVQ6 348 aaPredicted RBP5.72□□□□□ -1.49
USH2A-203ENST00000463147 ARHGAP36Q6ZRI8 547 aa5.72□□□□□ -1.49
USH2A-203ENST00000463147 ZSWIM2Q8NEG5 633 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms