RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 ZNF445P59923 1031 aa11.84□□□□□ -0.51
RTF1-202ENST00000462276 PTPN11Q06124 597 aaPredicted RBP11.84□□□□□ -0.51
RTF1-202ENST00000462276 PPFIA1Q13136 1202 aa11.84□□□□□ -0.51
RTF1-202ENST00000462276 CUL4BQ13620 913 aa11.84□□□□□ -0.51
RTF1-202ENST00000462276 GIT2Q14161 759 aa11.84□□□□□ -0.51
RTF1-202ENST00000462276 MFSD10Q14728 455 aa11.84□□□□□ -0.51
RTF1-202ENST00000462276 LRRC41Q15345 812 aa11.84□□□□□ -0.51
RTF1-202ENST00000462276 KCNA10Q16322 511 aa11.84□□□□□ -0.51
RTF1-202ENST00000462276 KIAA0753Q2KHM9 967 aa11.84□□□□□ -0.51
RTF1-202ENST00000462276 SESTD1Q86VW0 696 aa11.84□□□□□ -0.51
RTF1-202ENST00000462276 MLKLQ8NB16 471 aa11.84□□□□□ -0.51
RTF1-202ENST00000462276 KAT2BQ92831 832 aa11.84□□□□□ -0.51
RTF1-202ENST00000462276 LENG1Q96BZ8 264 aaPredicted RBP11.84□□□□□ -0.51
RTF1-202ENST00000462276 ZNF333Q96JL9 665 aa11.84□□□□□ -0.51
RTF1-202ENST00000462276 RUSC1Q9BVN2 902 aa11.84□□□□□ -0.51
RTF1-202ENST00000462276 RNF208Q9H0X6 261 aa11.84□□□□□ -0.51
RTF1-202ENST00000462276 UNC93B1Q9H1C4 597 aa11.84□□□□□ -0.51
RTF1-202ENST00000462276 PARVGQ9HBI0 331 aa11.84□□□□□ -0.51
RTF1-202ENST00000462276 EXOC1Q9NV70 894 aa11.84□□□□□ -0.51
RTF1-202ENST00000462276 PANK4Q9NVE7 773 aa11.84□□□□□ -0.51
RTF1-202ENST00000462276 DACH1Q9UI36 760 aa11.84□□□□□ -0.51
RTF1-202ENST00000462276 OGDHLQ9ULD0 1010 aa11.84□□□□□ -0.51
RTF1-202ENST00000462276 MGAMO43451 1857 aa11.84□□□□□ -0.51
RTF1-202ENST00000462276 PLXNA1Q9UIW2 1896 aa11.84□□□□□ -0.51
RTF1-202ENST00000462276 IGKV6-21A0A0C4DH24 114 aa11.83□□□□□ -0.52
RTF1-202ENST00000462276 KBTBD13C9JR72 458 aa11.83□□□□□ -0.52
RTF1-202ENST00000462276 H0YCG3 227 aa11.83□□□□□ -0.52
RTF1-202ENST00000462276 DNM1LO00429 736 aa11.83□□□□□ -0.52
RTF1-202ENST00000462276 ASAP2O43150 1006 aa11.83□□□□□ -0.52
RTF1-202ENST00000462276 FAM13AO94988 1023 aa11.83□□□□□ -0.52
RTF1-202ENST00000462276 ASGR1P07306 291 aa11.83□□□□□ -0.52
RTF1-202ENST00000462276 ZNF286BP0CG31 522 aa11.83□□□□□ -0.52
RTF1-202ENST00000462276 INSRRP14616 1297 aa11.83□□□□□ -0.52
RTF1-202ENST00000462276 IDEP14735 1019 aa11.83□□□□□ -0.52
RTF1-202ENST00000462276 MARK3P27448 753 aa11.83□□□□□ -0.52
RTF1-202ENST00000462276 BEX3Q00994 111 aa11.83□□□□□ -0.52
RTF1-202ENST00000462276 ALCAMQ13740 583 aa11.83□□□□□ -0.52
RTF1-202ENST00000462276 MXD4Q14582 209 aaPredicted RBP11.83□□□□□ -0.52
RTF1-202ENST00000462276 PPP2R5AQ15172 486 aa11.83□□□□□ -0.52
RTF1-202ENST00000462276 MTERF2Q49AM1 385 aa11.83□□□□□ -0.52
RTF1-202ENST00000462276 COBLL1Q53SF7 1204 aa11.83□□□□□ -0.52
RTF1-202ENST00000462276 HERC4Q5GLZ8 1057 aaPredicted RBP11.83□□□□□ -0.52
RTF1-202ENST00000462276 IER5Q5VY09 327 aa11.83□□□□□ -0.52
RTF1-202ENST00000462276 PLA2G4FQ68DD2 849 aa11.83□□□□□ -0.52
RTF1-202ENST00000462276 NFRKBQ6P4R8 1299 aa11.83□□□□□ -0.52
RTF1-202ENST00000462276 STXBP4Q6ZWJ1 553 aa11.83□□□□□ -0.52
RTF1-202ENST00000462276 DYMQ7RTS9 669 aa11.83□□□□□ -0.52
RTF1-202ENST00000462276 GRAMD1CQ8IYS0 662 aa11.83□□□□□ -0.52
RTF1-202ENST00000462276 C7orf31Q8N865 590 aa11.83□□□□□ -0.52
RTF1-202ENST00000462276 STAMQ92783 540 aa11.83□□□□□ -0.52
RTF1-202ENST00000462276 KCNN1Q92952 543 aa11.83□□□□□ -0.52
RTF1-202ENST00000462276 ABHD8Q96I13 439 aa11.83□□□□□ -0.52
RTF1-202ENST00000462276 GLT1D1Q96MS3 346 aa11.83□□□□□ -0.52
RTF1-202ENST00000462276 CEP89Q96ST8 783 aa11.83□□□□□ -0.52
RTF1-202ENST00000462276 REEP2Q9BRK0 252 aa11.83□□□□□ -0.52
RTF1-202ENST00000462276 NTPCRQ9BSD7 190 aaKnown RBP11.83□□□□□ -0.52
RTF1-202ENST00000462276 NAT10Q9H0A0 1025 aaKnown RBP11.83□□□□□ -0.52
RTF1-202ENST00000462276 CRISPLD2Q9H0B8 497 aa11.83□□□□□ -0.52
RTF1-202ENST00000462276 BLZF1Q9H2G9 400 aa11.83□□□□□ -0.52
RTF1-202ENST00000462276 OLFML3Q9NRN5 406 aa11.83□□□□□ -0.52
RTF1-202ENST00000462276 PHLPP2Q6ZVD8 1323 aa11.83□□□□□ -0.52
RTF1-202ENST00000462276 KIAA1217Q5T5P2 1943 aa11.82□□□□□ -0.52
RTF1-202ENST00000462276 A0A087WWV3 80 aa11.82□□□□□ -0.52
RTF1-202ENST00000462276 MBLAC1A4D2B0 266 aaPredicted RBP11.82□□□□□ -0.52
RTF1-202ENST00000462276 ZBTB42B2RXF5 422 aa11.82□□□□□ -0.52
RTF1-202ENST00000462276 KLRC4O43908 158 aa11.82□□□□□ -0.52
RTF1-202ENST00000462276 USO1O60763 962 aaKnown RBP11.82□□□□□ -0.52
RTF1-202ENST00000462276 PLS3P13797 630 aa11.82□□□□□ -0.52
RTF1-202ENST00000462276 PTGS1P23219 599 aa11.82□□□□□ -0.52
RTF1-202ENST00000462276 ACLYP53396 1101 aa11.82□□□□□ -0.52
RTF1-202ENST00000462276 SMTNP53814 917 aa11.82□□□□□ -0.52
RTF1-202ENST00000462276 NLRP12P59046 1061 aa11.82□□□□□ -0.52
RTF1-202ENST00000462276 POU5F1BQ06416 359 aa11.82□□□□□ -0.52
RTF1-202ENST00000462276 EHHADHQ08426 723 aa11.82□□□□□ -0.52
RTF1-202ENST00000462276 STIM1Q13586 685 aa11.82□□□□□ -0.52
RTF1-202ENST00000462276 MORC3Q14149 939 aa11.82□□□□□ -0.52
RTF1-202ENST00000462276 EMC2Q15006 297 aa11.82□□□□□ -0.52
RTF1-202ENST00000462276 GRIK4Q16099 956 aa11.82□□□□□ -0.52
RTF1-202ENST00000462276 STX1AQ16623 288 aa11.82□□□□□ -0.52
RTF1-202ENST00000462276 KMT5BQ4FZB7 885 aa11.82□□□□□ -0.52
RTF1-202ENST00000462276 ZNF658Q5TYW1 1059 aaPredicted RBP11.82□□□□□ -0.52
RTF1-202ENST00000462276 TAF2Q6P1X5 1199 aa11.82□□□□□ -0.52
RTF1-202ENST00000462276 CXCL17Q6UXB2 119 aa11.82□□□□□ -0.52
RTF1-202ENST00000462276 ANKLE1Q8NAG6 615 aa11.82□□□□□ -0.52
RTF1-202ENST00000462276 SPIRE2Q8WWL2 714 aa11.82□□□□□ -0.52
RTF1-202ENST00000462276 IFT74Q96LB3 600 aa11.82□□□□□ -0.52
RTF1-202ENST00000462276 DEFB118Q96PH6 123 aa11.82□□□□□ -0.52
RTF1-202ENST00000462276 RNF39Q9H2S5 420 aa11.82□□□□□ -0.52
RTF1-202ENST00000462276 MAN1B1Q9UKM7 699 aa11.82□□□□□ -0.52
RTF1-202ENST00000462276 PHF24Q9UPV7 400 aa11.82□□□□□ -0.52
RTF1-202ENST00000462276 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.81□□□□□ -0.52
RTF1-202ENST00000462276 SYCE3A1L190 88 aa11.81□□□□□ -0.52
RTF1-202ENST00000462276 C17orf102A2RUQ5 167 aa11.81□□□□□ -0.52
RTF1-202ENST00000462276 MYADML2A6NDP7 307 aa11.81□□□□□ -0.52
RTF1-202ENST00000462276 HIP1RO75146 1068 aa11.81□□□□□ -0.52
RTF1-202ENST00000462276 SLC34A2O95436 690 aa11.81□□□□□ -0.52
RTF1-202ENST00000462276 SGPL1O95470 568 aa11.81□□□□□ -0.52
RTF1-202ENST00000462276 C22orf31O95567 290 aa11.81□□□□□ -0.52
RTF1-202ENST00000462276 PRR29P0C7W0 189 aa11.81□□□□□ -0.52
RTF1-202ENST00000462276 SMIM10L2AP0DMW4 78 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms