RNA–Protein interactions for RNA: ENST00000461409.1

HDAC9-220, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-220ENST00000461409 H3BNC9 293 aa9.89□□□□□ -0.83
HDAC9-220ENST00000461409 MEIS1O00470 390 aa9.89□□□□□ -0.83
HDAC9-220ENST00000461409 INSRRP14616 1297 aa9.89□□□□□ -0.83
HDAC9-220ENST00000461409 JUNDP17535 347 aa9.89□□□□□ -0.83
HDAC9-220ENST00000461409 METAP2P50579 478 aaKnown RBP eCLIP9.89□□□□□ -0.83
HDAC9-220ENST00000461409 STAT5BP51692 787 aa9.89□□□□□ -0.83
HDAC9-220ENST00000461409 IGBP1P78318 339 aa9.89□□□□□ -0.83
HDAC9-220ENST00000461409 MGAT3Q09327 533 aa9.89□□□□□ -0.83
HDAC9-220ENST00000461409 ADCK5Q3MIX3 580 aa9.89□□□□□ -0.83
HDAC9-220ENST00000461409 FBXO47Q5MNV8 452 aa9.89□□□□□ -0.83
HDAC9-220ENST00000461409 TMEM192Q8IY95 271 aa9.89□□□□□ -0.83
HDAC9-220ENST00000461409 FIBCD1Q8N539 461 aa9.89□□□□□ -0.83
HDAC9-220ENST00000461409 CYP2W1Q8TAV3 490 aa9.89□□□□□ -0.83
HDAC9-220ENST00000461409 DNAJB3Q8WWF6 145 aa9.89□□□□□ -0.83
HDAC9-220ENST00000461409 C11orf84Q9BUA3 381 aaPredicted RBP9.89□□□□□ -0.83
HDAC9-220ENST00000461409 FTHL17Q9BXU8 183 aa9.89□□□□□ -0.83
HDAC9-220ENST00000461409 OSBPL7Q9BZF2 842 aa9.89□□□□□ -0.83
HDAC9-220ENST00000461409 FAM49AQ9H0Q0 323 aaPredicted RBP9.89□□□□□ -0.83
HDAC9-220ENST00000461409 UBE2ZQ9H832 354 aaPredicted RBP9.89□□□□□ -0.83
HDAC9-220ENST00000461409 PCDHA2Q9Y5H9 948 aa9.89□□□□□ -0.83
HDAC9-220ENST00000461409 CDY2AQ9Y6F7 541 aa9.89□□□□□ -0.83
HDAC9-220ENST00000461409 SQORQ9Y6N5 450 aa9.89□□□□□ -0.83
HDAC9-220ENST00000461409 DOCK5Q9H7D0 1870 aa9.89□□□□□ -0.83
HDAC9-220ENST00000461409 SIP14410 1827 aa9.89□□□□□ -0.83
HDAC9-220ENST00000461409 ADGRA3Q8IWK6 1321 aa9.88□□□□□ -0.83
HDAC9-220ENST00000461409 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.88□□□□□ -0.83
HDAC9-220ENST00000461409 ESYT2A0FGR8 921 aa9.88□□□□□ -0.83
HDAC9-220ENST00000461409 BACH1O14867 736 aa9.88□□□□□ -0.83
HDAC9-220ENST00000461409 RB1P06400 928 aa9.88□□□□□ -0.83
HDAC9-220ENST00000461409 ARP10275 920 aa9.88□□□□□ -0.83
HDAC9-220ENST00000461409 SCG2P13521 617 aa9.88□□□□□ -0.83
HDAC9-220ENST00000461409 KCNA5P22460 613 aa9.88□□□□□ -0.83
HDAC9-220ENST00000461409 CTNNB1P35222 781 aa9.88□□□□□ -0.83
HDAC9-220ENST00000461409 CLK2P49760 499 aaKnown RBP9.88□□□□□ -0.83
HDAC9-220ENST00000461409 SETQ01105 290 aaPredicted RBP9.88□□□□□ -0.83
HDAC9-220ENST00000461409 ITGB3BPQ13352 177 aaPredicted RBP9.88□□□□□ -0.83
HDAC9-220ENST00000461409 GPM6BQ13491 265 aa9.88□□□□□ -0.83
HDAC9-220ENST00000461409 PLCB4Q15147 1175 aa9.88□□□□□ -0.83
HDAC9-220ENST00000461409 PFKFB3Q16875 520 aaPredicted RBP9.88□□□□□ -0.83
HDAC9-220ENST00000461409 LEXMQ3ZCV2 418 aa9.88□□□□□ -0.83
HDAC9-220ENST00000461409 FAM160B1Q5W0V3 765 aa9.88□□□□□ -0.83
HDAC9-220ENST00000461409 SKAP1Q86WV1 359 aa9.88□□□□□ -0.83
HDAC9-220ENST00000461409 REXO1Q8N1G1 1221 aaKnown RBP9.88□□□□□ -0.83
HDAC9-220ENST00000461409 NME8Q8N427 588 aa9.88□□□□□ -0.83
HDAC9-220ENST00000461409 BANK1Q8NDB2 785 aa9.88□□□□□ -0.83
HDAC9-220ENST00000461409 PGBD1Q96JS3 809 aa9.88□□□□□ -0.83
HDAC9-220ENST00000461409 PCYT2Q99447 389 aa9.88□□□□□ -0.83
HDAC9-220ENST00000461409 C6orf50Q9HD87 102 aa9.88□□□□□ -0.83
HDAC9-220ENST00000461409 TCEAL9Q9UHQ7 104 aa9.88□□□□□ -0.83
HDAC9-220ENST00000461409 TRPV2Q9Y5S1 764 aa9.88□□□□□ -0.83
HDAC9-220ENST00000461409 BRWD1Q9NSI6 2320 aa9.88□□□□□ -0.83
HDAC9-220ENST00000461409 IGSF9BQ9UPX0 1349 aa9.87□□□□□ -0.83
HDAC9-220ENST00000461409 C5orf67F2Z3F1 127 aa9.87□□□□□ -0.83
HDAC9-220ENST00000461409 IPO5O00410 1097 aaKnown RBP9.87□□□□□ -0.83
HDAC9-220ENST00000461409 ENPP3O14638 875 aa9.87□□□□□ -0.83
HDAC9-220ENST00000461409 NCK2O43639 380 aa9.87□□□□□ -0.83
HDAC9-220ENST00000461409 HBP1O60381 514 aa9.87□□□□□ -0.83
HDAC9-220ENST00000461409 REC8O95072 547 aa9.87□□□□□ -0.83
HDAC9-220ENST00000461409 ATG7O95352 703 aa9.87□□□□□ -0.83
HDAC9-220ENST00000461409 CYP3A4P08684 503 aa9.87□□□□□ -0.83
HDAC9-220ENST00000461409 GNA11P29992 359 aa9.87□□□□□ -0.83
HDAC9-220ENST00000461409 CDC27P30260 824 aa9.87□□□□□ -0.83
HDAC9-220ENST00000461409 ADD1P35611 737 aaKnown RBP9.87□□□□□ -0.83
HDAC9-220ENST00000461409 AKAP17AQ02040 695 aaKnown RBP9.87□□□□□ -0.83
HDAC9-220ENST00000461409 PAK2Q13177 524 aa9.87□□□□□ -0.83
HDAC9-220ENST00000461409 BTG3Q14201 252 aaPredicted RBP9.87□□□□□ -0.83
HDAC9-220ENST00000461409 MIS18BP1Q6P0N0 1132 aa9.87□□□□□ -0.83
HDAC9-220ENST00000461409 BLOC1S2Q6QNY1 142 aa9.87□□□□□ -0.83
HDAC9-220ENST00000461409 PLA2G4DQ86XP0 818 aa9.87□□□□□ -0.83
HDAC9-220ENST00000461409 FBXL16Q8N461 479 aa9.87□□□□□ -0.83
HDAC9-220ENST00000461409 BICD2Q8TD16 824 aa9.87□□□□□ -0.83
HDAC9-220ENST00000461409 ATP8B4Q8TF62 1192 aa9.87□□□□□ -0.83
HDAC9-220ENST00000461409 KCNB2Q92953 911 aa9.87□□□□□ -0.83
HDAC9-220ENST00000461409 CLP1Q92989 425 aaKnown RBP9.87□□□□□ -0.83
HDAC9-220ENST00000461409 JAKMIP1Q96N16 626 aaKnown RBP9.87□□□□□ -0.83
HDAC9-220ENST00000461409 PLVAPQ9BX97 442 aa9.87□□□□□ -0.83
HDAC9-220ENST00000461409 CELF4Q9BZC1 486 aaKnown RBP9.87□□□□□ -0.83
HDAC9-220ENST00000461409 ZMYND12Q9H0C1 365 aa9.87□□□□□ -0.83
HDAC9-220ENST00000461409 LMAN2LQ9H0V9 348 aa9.87□□□□□ -0.83
HDAC9-220ENST00000461409 NSUN3Q9H649 340 aaKnown RBP9.87□□□□□ -0.83
HDAC9-220ENST00000461409 AGO3Q9H9G7 860 aaKnown RBP9.87□□□□□ -0.83
HDAC9-220ENST00000461409 TMEM260Q9NX78 707 aa9.87□□□□□ -0.83
HDAC9-220ENST00000461409 FAM50BQ9Y247 325 aa9.87□□□□□ -0.83
HDAC9-220ENST00000461409 KAT6AQ92794 2004 aa9.87□□□□□ -0.83
HDAC9-220ENST00000461409 COL1A2P08123 1366 aa9.87□□□□□ -0.83
HDAC9-220ENST00000461409 NID2Q14112 1375 aa9.87□□□□□ -0.83
HDAC9-220ENST00000461409 KDM3AQ9Y4C1 1321 aa9.86□□□□□ -0.83
HDAC9-220ENST00000461409 IGKV6D-21A0A0A0MT36 114 aa9.86□□□□□ -0.83
HDAC9-220ENST00000461409 SMIM35A0A1B0GVV1 85 aa9.86□□□□□ -0.83
HDAC9-220ENST00000461409 FAM86B1E9PN63 330 aa9.86□□□□□ -0.83
HDAC9-220ENST00000461409 DGKIO75912 1065 aa9.86□□□□□ -0.83
HDAC9-220ENST00000461409 CCNE2O96020 404 aa9.86□□□□□ -0.83
HDAC9-220ENST00000461409 FAM86B2P0C5J1 330 aa9.86□□□□□ -0.83
HDAC9-220ENST00000461409 STAG3L1P0CL83 205 aa9.86□□□□□ -0.83
HDAC9-220ENST00000461409 PSMA5P28066 241 aa9.86□□□□□ -0.83
HDAC9-220ENST00000461409 CD52P31358 61 aa9.86□□□□□ -0.83
HDAC9-220ENST00000461409 HSPA4P34932 840 aa9.86□□□□□ -0.83
HDAC9-220ENST00000461409 BMPR1AP36894 532 aa9.86□□□□□ -0.83
HDAC9-220ENST00000461409 KRT76Q01546 638 aa9.86□□□□□ -0.83
HDAC9-220ENST00000461409 APOBRQ0VD83 1088 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms