RNA–Protein interactions for RNA: ENST00000461194.5

NUP50-212, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-212ENST00000461194 A0A0G2JMZ2 1700 aa8.08□□□□□ -1.12
NUP50-212ENST00000461194 DOCK3Q8IZD9 2030 aa8.08□□□□□ -1.12
NUP50-212ENST00000461194 MKI67P46013 3256 aaKnown RBP8.07□□□□□ -1.12
NUP50-212ENST00000461194 ADAM11O75078 769 aa8.07□□□□□ -1.12
NUP50-212ENST00000461194 TFRCP02786 760 aaKnown RBP8.07□□□□□ -1.12
NUP50-212ENST00000461194 SNHG28P0DPA3 235 aa8.07□□□□□ -1.12
NUP50-212ENST00000461194 SELPP16109 830 aa8.07□□□□□ -1.12
NUP50-212ENST00000461194 TRDNQ13061 729 aa8.07□□□□□ -1.12
NUP50-212ENST00000461194 IKQ13123 557 aaPredicted RBP8.07□□□□□ -1.12
NUP50-212ENST00000461194 CCDC85BQ15834 202 aaPredicted RBP8.07□□□□□ -1.12
NUP50-212ENST00000461194 CCDC96Q2M329 555 aa8.07□□□□□ -1.12
NUP50-212ENST00000461194 ZNF792Q3KQV3 632 aa8.07□□□□□ -1.12
NUP50-212ENST00000461194 TTBK2Q6IQ55 1244 aa8.07□□□□□ -1.12
NUP50-212ENST00000461194 KIAA1211Q6ZU35 1233 aa8.07□□□□□ -1.12
NUP50-212ENST00000461194 RASGRP2Q7LDG7 609 aa8.07□□□□□ -1.12
NUP50-212ENST00000461194 UBE2Q1Q7Z7E8 422 aa8.07□□□□□ -1.12
NUP50-212ENST00000461194 ALYREFQ86V81 257 aaKnown RBP8.07□□□□□ -1.12
NUP50-212ENST00000461194 CHST13Q8NET6 341 aa8.07□□□□□ -1.12
NUP50-212ENST00000461194 CHMP4CQ96CF2 233 aa8.07□□□□□ -1.12
NUP50-212ENST00000461194 CRELD1Q96HD1 420 aa8.07□□□□□ -1.12
NUP50-212ENST00000461194 BACH2Q9BYV9 841 aa8.07□□□□□ -1.12
NUP50-212ENST00000461194 FBXO40Q9UH90 709 aa8.07□□□□□ -1.12
NUP50-212ENST00000461194 OGDHLQ9ULD0 1010 aa8.07□□□□□ -1.12
NUP50-212ENST00000461194 DIS3Q9Y2L1 958 aaKnown RBP8.07□□□□□ -1.12
NUP50-212ENST00000461194 ZNF536O15090 1300 aa8.06□□□□□ -1.12
NUP50-212ENST00000461194 TNKSO95271 1327 aa8.06□□□□□ -1.12
NUP50-212ENST00000461194 FRMPD2Q68DX3 1309 aaPredicted RBP8.06□□□□□ -1.12
NUP50-212ENST00000461194 PLXNB2O15031 1838 aa8.06□□□□□ -1.12
NUP50-212ENST00000461194 FARP2O94887 1054 aaPredicted RBP8.06□□□□□ -1.12
NUP50-212ENST00000461194 CYP11A1P05108 521 aa8.06□□□□□ -1.12
NUP50-212ENST00000461194 PGK2P07205 417 aa8.06□□□□□ -1.12
NUP50-212ENST00000461194 MAOBP27338 520 aa8.06□□□□□ -1.12
NUP50-212ENST00000461194 CCND3P30281 292 aaPredicted RBP8.06□□□□□ -1.12
NUP50-212ENST00000461194 CYP2C19P33261 490 aa8.06□□□□□ -1.12
NUP50-212ENST00000461194 ZNF543Q08ER8 600 aa8.06□□□□□ -1.12
NUP50-212ENST00000461194 TSNAXIP1Q2TAA8 658 aa8.06□□□□□ -1.12
NUP50-212ENST00000461194 TKFCQ3LXA3 575 aa8.06□□□□□ -1.12
NUP50-212ENST00000461194 SYDE2Q5VT97 1194 aa8.06□□□□□ -1.12
NUP50-212ENST00000461194 ERICH6BQ5W0A0 696 aa8.06□□□□□ -1.12
NUP50-212ENST00000461194 TMEM151AQ8N4L1 468 aa8.06□□□□□ -1.12
NUP50-212ENST00000461194 ENAHQ8N8S7 591 aaPredicted RBP8.06□□□□□ -1.12
NUP50-212ENST00000461194 UBASH3BQ8TF42 649 aa8.06□□□□□ -1.12
NUP50-212ENST00000461194 LENG1Q96BZ8 264 aaPredicted RBP8.06□□□□□ -1.12
NUP50-212ENST00000461194 MAML3Q96JK9 1138 aa8.06□□□□□ -1.12
NUP50-212ENST00000461194 NECAB3Q96P71 396 aaPredicted RBP8.06□□□□□ -1.12
NUP50-212ENST00000461194 UBAC1Q9BSL1 405 aa8.06□□□□□ -1.12
NUP50-212ENST00000461194 LSG1Q9H089 658 aaKnown RBP8.06□□□□□ -1.12
NUP50-212ENST00000461194 RANBP17Q9H2T7 1088 aaKnown RBP8.06□□□□□ -1.12
NUP50-212ENST00000461194 KAT14Q9H8E8 782 aa8.06□□□□□ -1.12
NUP50-212ENST00000461194 RBM8AQ9Y5S9 174 aaKnown RBP8.06□□□□□ -1.12
NUP50-212ENST00000461194 RBBP6Q7Z6E9 1792 aaKnown RBP8.05□□□□□ -1.12
NUP50-212ENST00000461194 DNAJC25-GNG10A0A024R161 153 aa8.05□□□□□ -1.12
NUP50-212ENST00000461194 C9orf172C9J069 976 aa8.05□□□□□ -1.12
NUP50-212ENST00000461194 E7EWF7 191 aa8.05□□□□□ -1.12
NUP50-212ENST00000461194 EIF4EBP3O60516 100 aaPredicted RBP8.05□□□□□ -1.12
NUP50-212ENST00000461194 MSCO60682 206 aa8.05□□□□□ -1.12
NUP50-212ENST00000461194 WISP1O95388 367 aa8.05□□□□□ -1.12
NUP50-212ENST00000461194 ICAM1P05362 532 aa8.05□□□□□ -1.12
NUP50-212ENST00000461194 CENPBP07199 599 aaPredicted RBP8.05□□□□□ -1.12
NUP50-212ENST00000461194 CYBAP13498 195 aa8.05□□□□□ -1.12
NUP50-212ENST00000461194 SLC16A2P36021 539 aa8.05□□□□□ -1.12
NUP50-212ENST00000461194 GSK3AP49840 483 aa8.05□□□□□ -1.12
NUP50-212ENST00000461194 SNAP25P60880 206 aa8.05□□□□□ -1.12
NUP50-212ENST00000461194 POU4F3Q15319 338 aa8.05□□□□□ -1.12
NUP50-212ENST00000461194 SEC23AQ15436 765 aa8.05□□□□□ -1.12
NUP50-212ENST00000461194 GPATCH4Q5T3I0 446 aaKnown RBP8.05□□□□□ -1.12
NUP50-212ENST00000461194 IFIT1BQ5T764 474 aaKnown RBP8.05□□□□□ -1.12
NUP50-212ENST00000461194 CCDC174Q6PII3 467 aa8.05□□□□□ -1.12
NUP50-212ENST00000461194 STOX1Q6ZVD7 989 aa8.05□□□□□ -1.12
NUP50-212ENST00000461194 CYB5R4Q7L1T6 521 aa8.05□□□□□ -1.12
NUP50-212ENST00000461194 ANKRD35Q8N283 1001 aa8.05□□□□□ -1.12
NUP50-212ENST00000461194 MSL3Q8N5Y2 521 aaKnown RBP8.05□□□□□ -1.12
NUP50-212ENST00000461194 TMEM87AQ8NBN3 555 aa8.05□□□□□ -1.12
NUP50-212ENST00000461194 TRPV1Q8NER1 839 aa8.05□□□□□ -1.12
NUP50-212ENST00000461194 NCOA7Q8NI08 942 aa8.05□□□□□ -1.12
NUP50-212ENST00000461194 DDX11Q96FC9 970 aa8.05□□□□□ -1.12
NUP50-212ENST00000461194 NACC1Q96RE7 527 aa8.05□□□□□ -1.12
NUP50-212ENST00000461194 TRIM56Q9BRZ2 755 aaKnown RBP8.05□□□□□ -1.12
NUP50-212ENST00000461194 MRPL18Q9H0U6 180 aaKnown RBP8.05□□□□□ -1.12
NUP50-212ENST00000461194 ACAD9Q9H845 621 aa8.05□□□□□ -1.12
NUP50-212ENST00000461194 RNF146Q9NTX7 359 aa8.05□□□□□ -1.12
NUP50-212ENST00000461194 KIAA1522Q9P206 1035 aaPredicted RBP8.05□□□□□ -1.12
NUP50-212ENST00000461194 DDX20Q9UHI6 824 aaKnown RBP8.05□□□□□ -1.12
NUP50-212ENST00000461194 NRBP1Q9UHY1 535 aa8.05□□□□□ -1.12
NUP50-212ENST00000461194 PNMA2Q9UL42 364 aa8.05□□□□□ -1.12
NUP50-212ENST00000461194 TAF6LQ9Y6J9 622 aa8.05□□□□□ -1.12
NUP50-212ENST00000461194 PARP14Q460N5 1801 aa8.04□□□□□ -1.12
NUP50-212ENST00000461194 ZNF236Q9UL36 1845 aa8.04□□□□□ -1.12
NUP50-212ENST00000461194 ENC1O14682 589 aa8.04□□□□□ -1.12
NUP50-212ENST00000461194 SEPT4O43236 478 aa8.04□□□□□ -1.12
NUP50-212ENST00000461194 CDC45O75419 566 aa8.04□□□□□ -1.12
NUP50-212ENST00000461194 PAGE1O75459 146 aa8.04□□□□□ -1.12
NUP50-212ENST00000461194 ALX3O95076 343 aa8.04□□□□□ -1.12
NUP50-212ENST00000461194 CELA3AP09093 270 aa8.04□□□□□ -1.12
NUP50-212ENST00000461194 GOLGA8HP0CJ92 632 aa8.04□□□□□ -1.12
NUP50-212ENST00000461194 ALAS1P13196 640 aa8.04□□□□□ -1.12
NUP50-212ENST00000461194 ARNTP27540 789 aa8.04□□□□□ -1.12
NUP50-212ENST00000461194 CNGA1P29973 690 aa8.04□□□□□ -1.12
NUP50-212ENST00000461194 NECTIN1Q15223 517 aa8.04□□□□□ -1.12
NUP50-212ENST00000461194 ASPRV1Q53RT3 343 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms