RNA–Protein interactions for RNA: ENST00000461113.5

HDAC4-207, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 1,019 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-207ENST00000461113 SPRYD3Q8NCJ5 442 aa14.11□□□□□ -0.15
HDAC4-207ENST00000461113 WNT8BQ93098 351 aa14.11□□□□□ -0.15
HDAC4-207ENST00000461113 HDAC6Q9UBN7 1215 aa14.11□□□□□ -0.15
HDAC4-207ENST00000461113 GTF2IRD1Q9UHL9 959 aa14.11□□□□□ -0.15
HDAC4-207ENST00000461113 SAMM50Q9Y512 469 aa14.11□□□□□ -0.15
HDAC4-207ENST00000461113 MYO15AQ9UKN7 3530 aa14.1□□□□□ -0.15
HDAC4-207ENST00000461113 LOC730098B7Z3J9 87 aa14.1□□□□□ -0.15
HDAC4-207ENST00000461113 DDX39AO00148 427 aaKnown RBP14.1□□□□□ -0.15
HDAC4-207ENST00000461113 BACH1O14867 736 aa14.1□□□□□ -0.15
HDAC4-207ENST00000461113 GRM6O15303 877 aa14.1□□□□□ -0.15
HDAC4-207ENST00000461113 MSH4O15457 936 aa14.1□□□□□ -0.15
HDAC4-207ENST00000461113 SYT1P21579 422 aa14.1□□□□□ -0.15
HDAC4-207ENST00000461113 PTK7Q13308 1070 aa14.1□□□□□ -0.15
HDAC4-207ENST00000461113 CALCRLQ16602 461 aa14.1□□□□□ -0.15
HDAC4-207ENST00000461113 HSDL1Q3SXM5 330 aa14.1□□□□□ -0.15
HDAC4-207ENST00000461113 TTC38Q5R3I4 469 aa14.1□□□□□ -0.15
HDAC4-207ENST00000461113 UTP14CQ5TAP6 766 aaKnown RBP14.1□□□□□ -0.15
HDAC4-207ENST00000461113 FAM160B1Q5W0V3 765 aa14.1□□□□□ -0.15
HDAC4-207ENST00000461113 ZNF746Q6NUN9 644 aaPredicted RBP14.1□□□□□ -0.15
HDAC4-207ENST00000461113 C7orf31Q8N865 590 aa14.1□□□□□ -0.15
HDAC4-207ENST00000461113 GLG1Q92896 1179 aa14.1□□□□□ -0.15
HDAC4-207ENST00000461113 ASIC4Q96FT7 647 aa14.1□□□□□ -0.15
HDAC4-207ENST00000461113 MBOAT7Q96N66 472 aa14.1□□□□□ -0.15
HDAC4-207ENST00000461113 GPR20Q99678 358 aa14.1□□□□□ -0.15
HDAC4-207ENST00000461113 SMARCAD1Q9H4L7 1026 aa14.1□□□□□ -0.15
HDAC4-207ENST00000461113 CACNA1HO95180 2353 aa14.09□□□□□ -0.15
HDAC4-207ENST00000461113 WDR64B1ANS9 1081 aa14.09□□□□□ -0.15
HDAC4-207ENST00000461113 STX6O43752 255 aa14.09□□□□□ -0.15
HDAC4-207ENST00000461113 CSPG5O95196 566 aa14.09□□□□□ -0.15
HDAC4-207ENST00000461113 PSAPP07602 524 aa14.09□□□□□ -0.15
HDAC4-207ENST00000461113 SFNP31947 248 aa14.09□□□□□ -0.15
HDAC4-207ENST00000461113 MCM7P33993 719 aa14.09□□□□□ -0.15
HDAC4-207ENST00000461113 CTNNB1P35222 781 aa14.09□□□□□ -0.15
HDAC4-207ENST00000461113 TCF7P36402 384 aaPredicted RBP14.09□□□□□ -0.15
HDAC4-207ENST00000461113 JAK3P52333 1124 aa14.09□□□□□ -0.15
HDAC4-207ENST00000461113 ACTR2P61160 394 aa14.09□□□□□ -0.15
HDAC4-207ENST00000461113 EARS2Q5JPH6 523 aaKnown RBP14.09□□□□□ -0.15
HDAC4-207ENST00000461113 SMAP1Q8IYB5 467 aaPredicted RBP14.09□□□□□ -0.15
HDAC4-207ENST00000461113 SLC5A5Q92911 643 aa14.09□□□□□ -0.15
HDAC4-207ENST00000461113 TOP1MTQ969P6 601 aa14.09□□□□□ -0.15
HDAC4-207ENST00000461113 ZSCAN16Q9H4T2 348 aaPredicted RBP14.09□□□□□ -0.15
HDAC4-207ENST00000461113 LCTP09848 1927 aa14.09□□□□□ -0.15
HDAC4-207ENST00000461113 FAM205CA6NFA0 338 aa14.08□□□□□ -0.16
HDAC4-207ENST00000461113 H3BRB1 525 aa14.08□□□□□ -0.16
HDAC4-207ENST00000461113 LGALS2P05162 132 aa14.08□□□□□ -0.16
HDAC4-207ENST00000461113 PSEN2P49810 448 aa14.08□□□□□ -0.16
HDAC4-207ENST00000461113 ZNF200P98182 395 aaPredicted RBP14.08□□□□□ -0.16
HDAC4-207ENST00000461113 ITGB3BPQ13352 177 aaPredicted RBP14.08□□□□□ -0.16
HDAC4-207ENST00000461113 ADAM15Q13444 863 aa14.08□□□□□ -0.16
HDAC4-207ENST00000461113 MFSD10Q14728 455 aa14.08□□□□□ -0.16
HDAC4-207ENST00000461113 CBX2Q14781 532 aaPredicted RBP14.08□□□□□ -0.16
HDAC4-207ENST00000461113 ZNF174Q15697 407 aa14.08□□□□□ -0.16
HDAC4-207ENST00000461113 TMEM266Q2M3C6 531 aa14.08□□□□□ -0.16
HDAC4-207ENST00000461113 RDM1Q8NG50 284 aa14.08□□□□□ -0.16
HDAC4-207ENST00000461113 LENG9Q96B70 501 aa14.08□□□□□ -0.16
HDAC4-207ENST00000461113 TUT1Q9H6E5 874 aaKnown RBP14.08□□□□□ -0.16
HDAC4-207ENST00000461113 ERAP1Q9NZ08 941 aa14.08□□□□□ -0.16
HDAC4-207ENST00000461113 CEP131Q9UPN4 1083 aa14.08□□□□□ -0.16
HDAC4-207ENST00000461113 PCDHA10Q9Y5I2 948 aa14.08□□□□□ -0.16
HDAC4-207ENST00000461113 EMSYQ7Z589 1322 aa14.08□□□□□ -0.16
HDAC4-207ENST00000461113 COL4A6Q14031 1691 aa14.07□□□□□ -0.16
HDAC4-207ENST00000461113 GALR2O43603 387 aaPredicted RBP14.07□□□□□ -0.16
HDAC4-207ENST00000461113 SLC37A4O43826 429 aa14.07□□□□□ -0.16
HDAC4-207ENST00000461113 DKC1O60832 514 aaKnown RBP eCLIP14.07□□□□□ -0.16
HDAC4-207ENST00000461113 EYA4O95677 639 aa14.07□□□□□ -0.16
HDAC4-207ENST00000461113 BMP15O95972 392 aa14.07□□□□□ -0.16
HDAC4-207ENST00000461113 ZNF286BP0CG31 522 aa14.07□□□□□ -0.16
HDAC4-207ENST00000461113 GNAT1P11488 350 aa14.07□□□□□ -0.16
HDAC4-207ENST00000461113 HOXD8P13378 290 aaPredicted RBP14.07□□□□□ -0.16
HDAC4-207ENST00000461113 NDUFV1P49821 464 aa14.07□□□□□ -0.16
HDAC4-207ENST00000461113 SLC26A2P50443 739 aa14.07□□□□□ -0.16
HDAC4-207ENST00000461113 STAT5BP51692 787 aa14.07□□□□□ -0.16
HDAC4-207ENST00000461113 KIAA0753Q2KHM9 967 aa14.07□□□□□ -0.16
HDAC4-207ENST00000461113 PLEKHG4Q58EX7 1191 aa14.07□□□□□ -0.16
HDAC4-207ENST00000461113 MIER3Q7Z3K6 550 aa14.07□□□□□ -0.16
HDAC4-207ENST00000461113 CKAP2LQ8IYA6 745 aa14.07□□□□□ -0.16
HDAC4-207ENST00000461113 FIBCD1Q8N539 461 aa14.07□□□□□ -0.16
HDAC4-207ENST00000461113 MSLNLQ96KJ4 702 aa14.07□□□□□ -0.16
HDAC4-207ENST00000461113 C11orf84Q9BUA3 381 aaPredicted RBP14.07□□□□□ -0.16
HDAC4-207ENST00000461113 IFIH1Q9BYX4 1025 aaKnown RBP14.07□□□□□ -0.16
HDAC4-207ENST00000461113 RAB34Q9BZG1 259 aa14.07□□□□□ -0.16
HDAC4-207ENST00000461113 LMAN2LQ9H0V9 348 aa14.07□□□□□ -0.16
HDAC4-207ENST00000461113 DISC1Q9NRI5 854 aa14.07□□□□□ -0.16
HDAC4-207ENST00000461113 PCDHA12Q9UN75 941 aa14.07□□□□□ -0.16
HDAC4-207ENST00000461113 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.06□□□□□ -0.16
HDAC4-207ENST00000461113 GSTTP1A0A1W2PQM5 241 aa14.06□□□□□ -0.16
HDAC4-207ENST00000461113 RSPH10B2B2RC85 870 aa14.06□□□□□ -0.16
HDAC4-207ENST00000461113 C5orf67F2Z3F1 127 aa14.06□□□□□ -0.16
HDAC4-207ENST00000461113 LAD1O00515 517 aa14.06□□□□□ -0.16
HDAC4-207ENST00000461113 DHX15O43143 795 aaKnown RBP14.06□□□□□ -0.16
HDAC4-207ENST00000461113 CHMP2AO43633 222 aa14.06□□□□□ -0.16
HDAC4-207ENST00000461113 KRT37O76014 449 aa14.06□□□□□ -0.16
HDAC4-207ENST00000461113 F2P00734 622 aa14.06□□□□□ -0.16
HDAC4-207ENST00000461113 PDGFBP01127 241 aaPredicted RBP14.06□□□□□ -0.16
HDAC4-207ENST00000461113 RB1P06400 928 aa14.06□□□□□ -0.16
HDAC4-207ENST00000461113 OR52Z1P0C646 297 aa14.06□□□□□ -0.16
HDAC4-207ENST00000461113 RSPH10BP0C881 870 aa14.06□□□□□ -0.16
HDAC4-207ENST00000461113 BMPR1AP36894 532 aa14.06□□□□□ -0.16
HDAC4-207ENST00000461113 THPOP40225 353 aa14.06□□□□□ -0.16
HDAC4-207ENST00000461113 NBL1P41271 181 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms