RNA–Protein interactions for RNA: ENST00000460925.1

SF3A3-202, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-202ENST00000460925 ANKRD18BA2A2Z9 1011 aa5.94□□□□□ -1.46
SF3A3-202ENST00000460925 ALG1L2C9J202 215 aa5.94□□□□□ -1.46
SF3A3-202ENST00000460925 AQP7O14520 342 aa5.94□□□□□ -1.46
SF3A3-202ENST00000460925 AURKAO14965 403 aa5.94□□□□□ -1.46
SF3A3-202ENST00000460925 TAF5LO75529 589 aa5.94□□□□□ -1.46
SF3A3-202ENST00000460925 SURF6O75683 361 aaKnown RBP5.94□□□□□ -1.46
SF3A3-202ENST00000460925 SRGNP10124 158 aa5.94□□□□□ -1.46
SF3A3-202ENST00000460925 NAT1P18440 290 aa5.94□□□□□ -1.46
SF3A3-202ENST00000460925 KCNA3P22001 575 aa5.94□□□□□ -1.46
SF3A3-202ENST00000460925 BMP8BP34820 402 aa5.94□□□□□ -1.46
SF3A3-202ENST00000460925 NFKB2Q00653 900 aa5.94□□□□□ -1.46
SF3A3-202ENST00000460925 EXOSC10Q01780 885 aaKnown RBP5.94□□□□□ -1.46
SF3A3-202ENST00000460925 CYP27A1Q02318 531 aa5.94□□□□□ -1.46
SF3A3-202ENST00000460925 TNK2Q07912 1038 aa5.94□□□□□ -1.46
SF3A3-202ENST00000460925 GRAPQ13588 217 aa5.94□□□□□ -1.46
SF3A3-202ENST00000460925 SF3B3Q15393 1217 aaKnown RBP5.94□□□□□ -1.46
SF3A3-202ENST00000460925 CCDC57Q2TAC2 916 aa5.94□□□□□ -1.46
SF3A3-202ENST00000460925 CYP27C1Q4G0S4 372 aa5.94□□□□□ -1.46
SF3A3-202ENST00000460925 TSHZ3Q63HK5 1081 aa5.94□□□□□ -1.46
SF3A3-202ENST00000460925 DENND5AQ6IQ26 1287 aa5.94□□□□□ -1.46
SF3A3-202ENST00000460925 RINLQ6ZS11 566 aa5.94□□□□□ -1.46
SF3A3-202ENST00000460925 ATG9AQ7Z3C6 839 aa5.94□□□□□ -1.46
SF3A3-202ENST00000460925 FGD2Q7Z6J4 655 aa5.94□□□□□ -1.46
SF3A3-202ENST00000460925 DDX42Q86XP3 938 aaKnown RBP eCLIP5.94□□□□□ -1.46
SF3A3-202ENST00000460925 MFSD4AQ8N468 514 aa5.94□□□□□ -1.46
SF3A3-202ENST00000460925 NPLOC4Q8TAT6 608 aa5.94□□□□□ -1.46
SF3A3-202ENST00000460925 GRAPLQ8TC17 118 aaPredicted RBP5.94□□□□□ -1.46
SF3A3-202ENST00000460925 OTUD7AQ8TE49 926 aaPredicted RBP5.94□□□□□ -1.46
SF3A3-202ENST00000460925 EVI5LQ96CN4 794 aa5.94□□□□□ -1.46
SF3A3-202ENST00000460925 SCLYQ96I15 445 aa5.94□□□□□ -1.46
SF3A3-202ENST00000460925 ZFYVE21Q9BQ24 234 aa5.94□□□□□ -1.46
SF3A3-202ENST00000460925 ORAI3Q9BRQ5 295 aa5.94□□□□□ -1.46
SF3A3-202ENST00000460925 MCMBPQ9BTE3 642 aa5.94□□□□□ -1.46
SF3A3-202ENST00000460925 BRIP1Q9BX63 1249 aa5.94□□□□□ -1.46
SF3A3-202ENST00000460925 C7orf69Q9H7B7 122 aa5.94□□□□□ -1.46
SF3A3-202ENST00000460925 MKNK2Q9HBH9 465 aa5.94□□□□□ -1.46
SF3A3-202ENST00000460925 IL1RAPL2Q9NP60 686 aa5.94□□□□□ -1.46
SF3A3-202ENST00000460925 KLHL42Q9P2K6 505 aa5.94□□□□□ -1.46
SF3A3-202ENST00000460925 RTL9Q8NET4 1388 aa5.93□□□□□ -1.46
SF3A3-202ENST00000460925 SCN9AQ15858 1988 aa5.93□□□□□ -1.46
SF3A3-202ENST00000460925 ZNF646O15015 1829 aaPredicted RBP5.93□□□□□ -1.46
SF3A3-202ENST00000460925 SHISA3A0PJX4 238 aa5.93□□□□□ -1.46
SF3A3-202ENST00000460925 KLRG2A4D1S0 409 aaPredicted RBP5.93□□□□□ -1.46
SF3A3-202ENST00000460925 BLACEA4D250 179 aa5.93□□□□□ -1.46
SF3A3-202ENST00000460925 PRR33A8MZF0 331 aa5.93□□□□□ -1.46
SF3A3-202ENST00000460925 MARCH6O60337 910 aa5.93□□□□□ -1.46
SF3A3-202ENST00000460925 SASH1O94885 1247 aa5.93□□□□□ -1.46
SF3A3-202ENST00000460925 EYA4O95677 639 aa5.93□□□□□ -1.46
SF3A3-202ENST00000460925 CBX7O95931 251 aa5.93□□□□□ -1.46
SF3A3-202ENST00000460925 NPR1P16066 1061 aa5.93□□□□□ -1.46
SF3A3-202ENST00000460925 KLRK1P26718 216 aa5.93□□□□□ -1.46
SF3A3-202ENST00000460925 ADORA1P30542 326 aa5.93□□□□□ -1.46
SF3A3-202ENST00000460925 ADMP35318 185 aa5.93□□□□□ -1.46
SF3A3-202ENST00000460925 IGFALSP35858 605 aa5.93□□□□□ -1.46
SF3A3-202ENST00000460925 PDE6BP35913 854 aa5.93□□□□□ -1.46
SF3A3-202ENST00000460925 NOP2P46087 812 aaKnown RBP5.93□□□□□ -1.46
SF3A3-202ENST00000460925 KCNJ6P48051 423 aa5.93□□□□□ -1.46
SF3A3-202ENST00000460925 SCRN1Q12765 414 aa5.93□□□□□ -1.46
SF3A3-202ENST00000460925 TFCP2Q12800 502 aa5.93□□□□□ -1.46
SF3A3-202ENST00000460925 HDAC1Q13547 482 aaPredicted RBP5.93□□□□□ -1.46
SF3A3-202ENST00000460925 MYBPC2Q14324 1141 aa5.93□□□□□ -1.46
SF3A3-202ENST00000460925 DHCR24Q15392 516 aa5.93□□□□□ -1.46
SF3A3-202ENST00000460925 CT47A1Q5JQC4 288 aaPredicted RBP5.93□□□□□ -1.46
SF3A3-202ENST00000460925 CWF19L1Q69YN2 538 aaKnown RBP5.93□□□□□ -1.46
SF3A3-202ENST00000460925 DDX46Q7L014 1031 aaKnown RBP5.93□□□□□ -1.46
SF3A3-202ENST00000460925 EGFL6Q8IUX8 553 aa5.93□□□□□ -1.46
SF3A3-202ENST00000460925 ANKRD18AQ8IVF6 992 aa5.93□□□□□ -1.46
SF3A3-202ENST00000460925 RPAP2Q8IXW5 612 aaPredicted RBP5.93□□□□□ -1.46
SF3A3-202ENST00000460925 C16orf71Q8IYS4 520 aaPredicted RBP5.93□□□□□ -1.46
SF3A3-202ENST00000460925 RBM17Q96I25 401 aaKnown RBP5.93□□□□□ -1.46
SF3A3-202ENST00000460925 MAGEB10Q96LZ2 347 aaPredicted RBP5.93□□□□□ -1.46
SF3A3-202ENST00000460925 TBC1D32Q96NH3 1257 aa5.93□□□□□ -1.46
SF3A3-202ENST00000460925 DUSP15Q9H1R2 295 aaPredicted RBP5.93□□□□□ -1.46
SF3A3-202ENST00000460925 CNNM1Q9NRU3 951 aa5.93□□□□□ -1.46
SF3A3-202ENST00000460925 RAXQ9Y2V3 346 aa5.93□□□□□ -1.46
SF3A3-202ENST00000460925 TNPO3Q9Y5L0 923 aaKnown RBP5.93□□□□□ -1.46
SF3A3-202ENST00000460925 COL4A5P29400 1685 aa5.93□□□□□ -1.46
SF3A3-202ENST00000460925 SBF1O95248 1867 aa5.93□□□□□ -1.46
SF3A3-202ENST00000460925 AKAP11Q9UKA4 1901 aa5.93□□□□□ -1.46
SF3A3-202ENST00000460925 ADAMTSL1Q8N6G6 1762 aa5.93□□□□□ -1.46
SF3A3-202ENST00000460925 SNED1Q8TER0 1413 aa5.92□□□□□ -1.46
SF3A3-202ENST00000460925 TIAM2Q8IVF5 1701 aa5.92□□□□□ -1.46
SF3A3-202ENST00000460925 TCRBV16S1A1N1A0A5B0 115 aa5.92□□□□□ -1.46
SF3A3-202ENST00000460925 B4E1Z4 1266 aa5.92□□□□□ -1.46
SF3A3-202ENST00000460925 H0YIN7 160 aa5.92□□□□□ -1.46
SF3A3-202ENST00000460925 EYA2O00167 538 aa5.92□□□□□ -1.46
SF3A3-202ENST00000460925 HMMRO75330 724 aa5.92□□□□□ -1.46
SF3A3-202ENST00000460925 CPEP16870 476 aa5.92□□□□□ -1.46
SF3A3-202ENST00000460925 IGHMBP2P38935 993 aaKnown RBP5.92□□□□□ -1.46
SF3A3-202ENST00000460925 ECI1P42126 302 aa5.92□□□□□ -1.46
SF3A3-202ENST00000460925 GPSM2P81274 684 aa5.92□□□□□ -1.46
SF3A3-202ENST00000460925 RASSF7Q02833 373 aa5.92□□□□□ -1.46
SF3A3-202ENST00000460925 CHRNDQ07001 517 aa5.92□□□□□ -1.46
SF3A3-202ENST00000460925 PRSS53Q2L4Q9 553 aa5.92□□□□□ -1.46
SF3A3-202ENST00000460925 METTL24Q5JXM2 366 aa5.92□□□□□ -1.46
SF3A3-202ENST00000460925 ANKRD45Q5TZF3 282 aa5.92□□□□□ -1.46
SF3A3-202ENST00000460925 E4F1Q66K89 784 aaPredicted RBP5.92□□□□□ -1.46
SF3A3-202ENST00000460925 RCSD1Q6JBY9 416 aa5.92□□□□□ -1.46
SF3A3-202ENST00000460925 CNNM4Q6P4Q7 775 aa5.92□□□□□ -1.46
SF3A3-202ENST00000460925 CRTC3Q6UUV7 619 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms