RNA–Protein interactions for RNA: ENST00000460485.1

ERCC3-205, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 3

Gene ERCC3, Length 815 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-205ENST00000460485 KCNG1Q9UIX4 513 aa15.5■□□□□ 0.07
ERCC3-205ENST00000460485 RANBP2P49792 3224 aaKnown RBP15.49■□□□□ 0.07
ERCC3-205ENST00000460485 MYH9P35579 1960 aaKnown RBP15.49■□□□□ 0.07
ERCC3-205ENST00000460485 ANO9A1A5B4 782 aa15.49■□□□□ 0.07
ERCC3-205ENST00000460485 GCNT3O95395 438 aa15.49■□□□□ 0.07
ERCC3-205ENST00000460485 TUBBP07437 444 aa15.49■□□□□ 0.07
ERCC3-205ENST00000460485 XRCC5P13010 732 aaKnown RBP15.49■□□□□ 0.07
ERCC3-205ENST00000460485 ITGB5P18084 799 aa15.49■□□□□ 0.07
ERCC3-205ENST00000460485 QARSP47897 775 aaKnown RBP15.49■□□□□ 0.07
ERCC3-205ENST00000460485 VAV2P52735 878 aa15.49■□□□□ 0.07
ERCC3-205ENST00000460485 PSMC6P62333 389 aa15.49■□□□□ 0.07
ERCC3-205ENST00000460485 ZNF746Q6NUN9 644 aaPredicted RBP15.49■□□□□ 0.07
ERCC3-205ENST00000460485 WDR59Q6PJI9 974 aa15.49■□□□□ 0.07
ERCC3-205ENST00000460485 SLC9A9Q8IVB4 645 aa15.49■□□□□ 0.07
ERCC3-205ENST00000460485 C4orf19Q8IY42 314 aa15.49■□□□□ 0.07
ERCC3-205ENST00000460485 SMAP1Q8IYB5 467 aaPredicted RBP15.49■□□□□ 0.07
ERCC3-205ENST00000460485 CCDC42Q96M95 316 aa15.49■□□□□ 0.07
ERCC3-205ENST00000460485 CCDC43Q96MW1 224 aaKnown RBP15.49■□□□□ 0.07
ERCC3-205ENST00000460485 NAPGQ99747 312 aaPredicted RBP15.49■□□□□ 0.07
ERCC3-205ENST00000460485 PDCD2LQ9BRP1 358 aa15.49■□□□□ 0.07
ERCC3-205ENST00000460485 ST6GALNAC4Q9H4F1 302 aa15.49■□□□□ 0.07
ERCC3-205ENST00000460485 TMEM206Q9H813 350 aa15.49■□□□□ 0.07
ERCC3-205ENST00000460485 RAVER2Q9HCJ3 691 aaKnown RBP15.49■□□□□ 0.07
ERCC3-205ENST00000460485 ANKEF1Q9NU02 776 aa15.49■□□□□ 0.07
ERCC3-205ENST00000460485 RGL1Q9NZL6 768 aa15.49■□□□□ 0.07
ERCC3-205ENST00000460485 FBXO40Q9UH90 709 aa15.49■□□□□ 0.07
ERCC3-205ENST00000460485 BZW2Q9Y6E2 419 aaKnown RBP15.49■□□□□ 0.07
ERCC3-205ENST00000460485 SSC5DA1L4H1 1573 aa15.49■□□□□ 0.07
ERCC3-205ENST00000460485 NFASCO94856 1347 aa15.48■□□□□ 0.07
ERCC3-205ENST00000460485 CHMP2AO43633 222 aa15.48■□□□□ 0.07
ERCC3-205ENST00000460485 AFPP02771 609 aaKnown RBP15.48■□□□□ 0.07
ERCC3-205ENST00000460485 NR3C1P04150 777 aa15.48■□□□□ 0.07
ERCC3-205ENST00000460485 ARP10275 920 aa15.48■□□□□ 0.07
ERCC3-205ENST00000460485 RFX1P22670 979 aa15.48■□□□□ 0.07
ERCC3-205ENST00000460485 COPB2P35606 906 aa15.48■□□□□ 0.07
ERCC3-205ENST00000460485 CTTNQ14247 550 aaKnown RBP15.48■□□□□ 0.07
ERCC3-205ENST00000460485 PPP2R5AQ15172 486 aa15.48■□□□□ 0.07
ERCC3-205ENST00000460485 WHAMMP3Q1A5X7 153 aa15.48■□□□□ 0.07
ERCC3-205ENST00000460485 GNPTABQ3T906 1256 aa15.48■□□□□ 0.07
ERCC3-205ENST00000460485 ARHGEF16Q5VV41 709 aa15.48■□□□□ 0.07
ERCC3-205ENST00000460485 PDXDC1Q6P996 788 aa15.48■□□□□ 0.07
ERCC3-205ENST00000460485 CHRDL2Q6WN34 429 aa15.48■□□□□ 0.07
ERCC3-205ENST00000460485 KIAA1328Q86T90 577 aa15.48■□□□□ 0.07
ERCC3-205ENST00000460485 FAM178BQ8IXR5 827 aa15.48■□□□□ 0.07
ERCC3-205ENST00000460485 CPXCR1Q8N123 301 aa15.48■□□□□ 0.07
ERCC3-205ENST00000460485 MYCT1Q8N699 235 aa15.48■□□□□ 0.07
ERCC3-205ENST00000460485 CHST13Q8NET6 341 aa15.48■□□□□ 0.07
ERCC3-205ENST00000460485 REPS2Q8NFH8 660 aa15.48■□□□□ 0.07
ERCC3-205ENST00000460485 NSUN6Q8TEA1 469 aaKnown RBP15.48■□□□□ 0.07
ERCC3-205ENST00000460485 UBXN4Q92575 508 aa15.48■□□□□ 0.07
ERCC3-205ENST00000460485 VTI1AQ96AJ9 217 aa15.48■□□□□ 0.07
ERCC3-205ENST00000460485 DRC1Q96MC2 740 aa15.48■□□□□ 0.07
ERCC3-205ENST00000460485 RMDN3Q96TC7 470 aa15.48■□□□□ 0.07
ERCC3-205ENST00000460485 ACAD9Q9H845 621 aa15.48■□□□□ 0.07
ERCC3-205ENST00000460485 MMRN2Q9H8L6 949 aa15.48■□□□□ 0.07
ERCC3-205ENST00000460485 NHEJ1Q9H9Q4 299 aaPredicted RBP15.48■□□□□ 0.07
ERCC3-205ENST00000460485 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.48■□□□□ 0.07
ERCC3-205ENST00000460485 COL6A3P12111 3177 aa15.48■□□□□ 0.07
ERCC3-205ENST00000460485 ASTN1O14525 1302 aa15.47■□□□□ 0.07
ERCC3-205ENST00000460485 NPHP3-ACAD11A0A0J9YXS1 232 aa15.47■□□□□ 0.07
ERCC3-205ENST00000460485 MAPK13O15264 365 aa15.47■□□□□ 0.07
ERCC3-205ENST00000460485 DHX15O43143 795 aaKnown RBP15.47■□□□□ 0.07
ERCC3-205ENST00000460485 TAL1P17542 331 aaPredicted RBP15.47■□□□□ 0.07
ERCC3-205ENST00000460485 PSMC2P35998 433 aaKnown RBP15.47■□□□□ 0.07
ERCC3-205ENST00000460485 ARHGAP25P42331 645 aa15.47■□□□□ 0.07
ERCC3-205ENST00000460485 PSMC5P62195 406 aa15.47■□□□□ 0.07
ERCC3-205ENST00000460485 CAP1Q01518 475 aa15.47■□□□□ 0.07
ERCC3-205ENST00000460485 KIF5AQ12840 1032 aa15.47■□□□□ 0.07
ERCC3-205ENST00000460485 C10orf76Q5T2E6 689 aa15.47■□□□□ 0.07
ERCC3-205ENST00000460485 CATSPERGQ6ZRH7 1159 aa15.47■□□□□ 0.07
ERCC3-205ENST00000460485 NELFCDQ8IXH7 590 aa15.47■□□□□ 0.07
ERCC3-205ENST00000460485 C12orf56Q8IXR9 622 aa15.47■□□□□ 0.07
ERCC3-205ENST00000460485 ACRBPQ8NEB7 543 aa15.47■□□□□ 0.07
ERCC3-205ENST00000460485 RPGRIP1Q96KN7 1286 aa15.47■□□□□ 0.07
ERCC3-205ENST00000460485 WDR24Q96S15 920 aa15.47■□□□□ 0.07
ERCC3-205ENST00000460485 PTPN18Q99952 460 aa15.47■□□□□ 0.07
ERCC3-205ENST00000460485 DEF6Q9H4E7 631 aa15.47■□□□□ 0.07
ERCC3-205ENST00000460485 C17orf75Q9HAS0 396 aa15.47■□□□□ 0.07
ERCC3-205ENST00000460485 LZTFL1Q9NQ48 299 aa15.47■□□□□ 0.07
ERCC3-205ENST00000460485 TBC1D7Q9P0N9 293 aa15.47■□□□□ 0.07
ERCC3-205ENST00000460485 COL20A1Q9P218 1284 aa15.47■□□□□ 0.07
ERCC3-205ENST00000460485 CDC23Q9UJX2 597 aa15.47■□□□□ 0.07
ERCC3-205ENST00000460485 CUL9Q8IWT3 2517 aa15.47■□□□□ 0.07
ERCC3-205ENST00000460485 LCTP09848 1927 aa15.47■□□□□ 0.07
ERCC3-205ENST00000460485 PFASO15067 1338 aa15.46■□□□□ 0.07
ERCC3-205ENST00000460485 RNF225M0QZC1 329 aaPredicted RBP15.46■□□□□ 0.07
ERCC3-205ENST00000460485 N4BP1O75113 896 aaKnown RBP15.46■□□□□ 0.07
ERCC3-205ENST00000460485 TADA3O75528 432 aa15.46■□□□□ 0.07
ERCC3-205ENST00000460485 SERPING1P05155 500 aa15.46■□□□□ 0.07
ERCC3-205ENST00000460485 MNX1P50219 401 aaPredicted RBP15.46■□□□□ 0.07
ERCC3-205ENST00000460485 MRPS9P82933 396 aaKnown RBP15.46■□□□□ 0.07
ERCC3-205ENST00000460485 MUM1L1Q5H9M0 696 aa15.46■□□□□ 0.07
ERCC3-205ENST00000460485 ZNF569Q5MCW4 686 aa15.46■□□□□ 0.07
ERCC3-205ENST00000460485 SFMBT2Q5VUG0 894 aa15.46■□□□□ 0.07
ERCC3-205ENST00000460485 SNRNP48Q6IEG0 339 aaKnown RBP15.46■□□□□ 0.07
ERCC3-205ENST00000460485 SAMD1Q6SPF0 538 aaPredicted RBP15.46■□□□□ 0.07
ERCC3-205ENST00000460485 ZNF720Q7Z2F6 126 aa15.46■□□□□ 0.07
ERCC3-205ENST00000460485 ZNF710Q8N1W2 664 aa15.46■□□□□ 0.07
ERCC3-205ENST00000460485 GLIS3Q8NEA6 775 aa15.46■□□□□ 0.07
ERCC3-205ENST00000460485 DNERQ8NFT8 737 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms